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Field | Value |
---|---|
Gene ID | LotjaGi4g1v0270100 |
Transcript ID | LotjaGi4g1v0270100.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Nitrate transporter 1.1; TAIR: AT2G26690.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SZY4|PTR27_ARATH Protein NRT1/ PTR FAMILY 6.2; TrEMBL-Plants: tr|V7CA08|V7CA08_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0270100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:63559147..63567935) extracted from Lotus japonicus Gifu genome v1.2.
TTTCAGGAGAAGATGAGTTGGACAGTTTCAGATGCTGTGGACTATAAAGGTTTCCCTGCTGATAGGTCCAAAACTGGTGG TTGGGTACCTGCTGCTCTCATTTTAGGTTTGTAAAGCTAATTACTTGTAGTATTGGTAATACCTTGTCTCGCTCCATTTT TGGAGCTTCTTCAATCCCTTCTTGCTAGAAGTTTGCATTTTCAAATACTAAGAGTATGTCTGGATACTCGTTGGTGCCAG TGCTAACAGACGTTAGCATCCATTTTGAGGTAAAAAGTGAACGAAACTCTTCTAATCGATTTAACGAATGTGTTTTCATG TTAACTGGTATTCAAAGTCACCATAACTCTTTTGAAAGCTTGAAAATGTTATAATTAGAGGGGCGTGAATGATTTTACCT CTTACAGGCCTGATCATAGCAATTAGCAACAGTAGCTTGAATCCTAGAAAAGGCTCTTACACTCTGGCACATATCAATTC TCATAAAAGTAGAGAGGTGTTGGTGGGTGCCATAAATGGTTTTTATATACAAACTAGCTGTAATATTAAAAACTCCACTG GATTCTATCTGAAAAAAGTTGTGGAGATTTCTTTTGATACCTTTCTGACATGATCCAATATCAATTTCTTCTATTTGAGT GAGCAAAATATTTTTAAAATTTTAACATAGTACTTGTTTCATTTTTCTATTCTTTCATGATTCTATTTTATAAAAAGTAT GTTATAAAAAAATCACATTAATATAATAGTTAAAACTCTATTAGATTAGATCATTTGGGAAAATGCACAAACCCTCCATT TCAATGAGTGCAGAGTAATATTTACCGTCACTCTCTATTTCATACAATTTCATTTTTTTCTTCTTCTTATATTTCTTTTT TTTTTAATTTCTATCACACCATTTTTTATGATCATTAGTGCCAAACAAATAACTTCCTTTTGTGTTTATGTGCACACACA AGTCACCGCTCTATTGGTTCATATTAAAAGGTTCAAAAGACCTCACAAGCACAATGGTCTACACCTTTTTTGGGGTGATG ATTGAGAAAAGAGAGCAACTCGAATATTACCAGACAAACCTAGTGGAATGTAAACTAAATATATTGAGGACAATTTATGC GTCATTTTCTGTTTGGACTGGGGGGAAACAGCAGAATATTATATACAAGCTTTATGATGATTTCTATATATATTTTCTCT TATTTTATCACCACACTTTCAAAAAGTTAAGTTTTTTTATTTATTTCCCAGCATTTTCTCCTTTTTCAACAGATTAAGGT TCACTTTTCACACGCAGTATCTAGTATCTGCTTAGAGCATCTACATCCATCATACTCACTAAAATATCTACACTTCATTT TTTACAATTCCCCATAGTGCCACATCATCTACACAACTTTACTAACTTTTTACTCTAACCCAACAACTCTTAGACCATGT ACAATGGTGTAAACAAGTTTTTCCCATTCAACACCACTTTTTATCTTCCCAACACTCCACATCATCTTCTCTCTCCAATT CAACACACTTTCAACAAATACCCACTCCAATGGTTTTCTCTCTCAACACCCTACCCCACCACTCACCCTACCCCACCACT TTTTATTTCATATTTTTATTTAATTTTATGTTTTTGTTTTTTTTATTTACATAAAATTACAATTATTATTTTAAATTAAA TTAAATAATAAACACTTAACGAATTAATTTTTTTTAATATAGATAATAATTTATTTTATTTCCTTAACTAAAAAATGGAA GACGATAAACGAAGCACACAATAATTTATTTTATTTTCTTAACTTAAAATGCAAGACAACAAACTAAGCACACAACACAC AAATAACGTAATTAGTACGATACAAATCATCTTCCATCACGAAGCATTTGCAAACTTTGTCCATATGTGCTTCACTAGAT CTGCTTGCAGTTCATGATGAACGTTCGAATCACGCAACTCGGATCTAGCACGCACATGATTTGCAAAAGCGGGTAACACC TCGGTCGAGTATGGTTGCGGTGTACTAGATCCACATTCCCCAGATTGCTCAAAATCGGTCCAACGTTGAGCAAATGTATC TCGTTCATCCTCAACAATCATATTATGTAATATGATGCATGACCTCATAATGATACCCAAATCAGCTATGTCCCACAAAC GAGCTGGTTCACGGATGATTTTAAAACGAGCTTGAAGAACTCCAAATGCACGTTCGATGTCCTTCCGACATCTCTCCTGA ACTTGTGCAAACAACTTATCCGGTTCACTTTGAGGAAGTCTGATCGATTTGACGAAAGTTGGATAAGAAGGGTAGATACC ATCAGCTAGATAGTATGCCATATTATAGGGACGTTGATTCACAATGAAACTCACAGTTGGAGCCTTTCCCTGTTCCACAT CATCAAACACTGGTGATCGATCTAGAACGTTTATGTCGTTCAACGTTCCCGGACATCCAAAAAAGGCATGCCAGATCCAT AGATCATGAGATGCAACTGCTTCAAGAATAACTGTAGTGGTTCCCTTATCCCCTCTAGTAAATTGACCTTCCCATGCTTT AGGACAATTTTTCCACTCCCAGTGCATGCAGTCAATACTCCCGATCATGCCTGGGAACCCCCTTTGTTCACTAACCTGTA GTATTCTTTGCAGGTCCTCTTGAGTTGGTGCTCTCAGGTACTCGTGCTCATACAATCGTATGATTCCATTACAGAATCTA CGTAAACACTCCAGTGCTGTAGTACCTCCTATTTTGATGTACTCATCGACTGCATCTGCTGCCACACCATATGCTAACAT TCGCATTGCTGTGGTACATTTTGCTAAGGGTGATATACCTTCTTTCTTGGCTGCATCAACTCGCTGGGTGAAGTAGTTAT CACTACTTGAAAAGTCCCCAACGATTCGAAGGAAAACGTGTTTTTGCATTCGGTACCGACGACGAAACATTGAATCGTCA TATGTAGGCTCATTGGCAAAGTAGTCGCCAATTAGCCTTCGGTTTGCTGCTGCATGATCTCTACGGACATACTTTCTACG AGGTGCACTATCTTCCAAATTTTGGTTTGGACCCAACCCTAATTGGTTGAGTATAAAAGCTTCTTCAAGTTGAGAATTTT GAAGGTATGTTGCAATATCAAAAGGATTTTCACAAGGATTCTCAAAAGGATCAAAAGGATCCATTTGTTGTGAAATTCGA AGTAGAAAGTAAGAGGTTTTGGATATTGGTACATAAATTGATCTATGAATCCATATATATAAGTAAATTGAATGGTGGAC ACTGACGGATTCAAAACAAGTTACCCACTAGAGTTAATAATCGGAAAAGGACTAGATTCGAATTGAGTGGAGCATATTCA AACCCAATAACCCATACACTAAAGCCGAACACTGCAGACTTGACACCACTGGCAAATTATTAAAGCAAACCCCACCGACT TGACACCACTGGCAAATTATTAAAGCAAACCCCACCGACTTGACACCACTGACAGATTCGAAACAAGTTACCCACTAGAG TTAATAATCGGAAAATGACTAGATTCGAATTGAGTGGAGCATATTCAAACCCAATAACCCATACACTAAAGCCGAACACT GCAGACTTGACACCACTGGCAAATTATTAAAGCAAACCCCACCGACTTGACACCACTGGCAAATTATTAAAGCAAACCCC ACCGACTTGACACCACTGACAGATTCGAAACAAGTTACCCACTAGAGTTAATAATCGGAAAAGGAGTAGATTCGAATTGA GTGGAACATATTCAAACACAATAACTCATACATTAAAGCCGAACATTACAGACTTGCCATCACTGACAAATTATTAAAGC AAACACAACATACTTGACGACAACACTGACAAATGGTTAAAGCAAACACCACAGACTTGACACCACTGGCGGGTTTGACC GAATACAGACAAATACTCGATTGAAATTAATTACCAAATAGGTCTTGGGCCAACTTACTCAACAGCTCTTTCTTACGGTC ATCGAGATCCTCTTCAGAACTTAGCTTGAGATACAAATTGGTTTTCATCAATTGGTTAGTTTGTTCTTGCACCATTGTTA GCTTATCAATTCGTGCAATCTCTTGAGCCTTCAAATCTTTGTATTCAACCCAAACTTTCCCCTTCTCCTCAACGACAGGT TCTTTACTTTTCTTTTTATTCTTTCTTTTAGCTGCCTCCCTACCCATTGGACGAGGAATTGATCCTATAGTGGTTGAGCC ACATGCATCACTATCGTGAGATCTCTTAGATCCACTACTTGCTGAGCCACCATTTCCTCCTACTTGACTACAAAAACGTG GTAGATCACGGAGAGCGATCCATTCTTCCATCAAAGTAAATTGAACATTCTTCCCACATGCGAATAATTCCTGCGCTTTT GCCAAAACATCATTATCCGACCAACCGCTTCCTTGTTGACGCTTAGCGGCATCATAAGCGCCAATCCATTTACCCAGTAT TTTGTTCATATAATTCCAACGGTTTCGACATGCAATTCCATCACGCGGAGGATCGAATGAGCAATGCTCATTACAATACT CAGCAATATCTCTCCAAAATGTTTCTCCTTTCTGGTTTTTCCCCACAACACTGCTTGTTCCACAGTTAATCCACCCACTA ATTAGCACCATATTTTGTGCAGTGTTCCATGCGGGTGCATGCGTTTTTTTGCTCTTAGGAGTGACTTCATTGACTTCATT ATCAGCTGACCCGTCACCAAGATTGACTTGTGTTGAAAATTCCGGAAATTCCGGTCCATCAACACTAGGAAAATTTGCAC GAACCATTGGCATATAACCACTAGACTGGGGTGTTTGAGATGGATATCTCACAGATCCATAAGATGGATGAAAGTTTGGA ACAAATGATGACTGGTTCAAATACTGATTTGGATCTGGATAATAGTTTGGATTTTGAGGATGTTGGTTGGAGAATTGATG TGGGACTTGAAAATAGTTTGGATTTTGAGGACGTTGGTTGGAGAATTGATGTGGGACTTGATAATTGGTGGGATTTTGAG GACGTGGGTAAGAAAATTGATTTGGATCTTCATAGTTGTTGGGATTTTGGTTGGAAATTGGGTAGCTTGAAGAATTCTGG GTGTTGTAATGGTGATTGTTGGGATCCATTTCAAAACAAATGCTAATAGAAGGATAATAAGATGGTGAGAGAGATAATAA AGATGGGGAAAAACTTGGTTTTTTTTTCTGTGTCCAAATCTATCAAACCAAGTCTCTATTTATAGAGAAAAAAAAGTTAT GAATTTTGGTAAAAAAAAAAAAAAAAAAAAAATTTCAACAAGATAATTCAGTTTAAAGTTTTTTTAAAAAAAAAATCCGG CTGGCCAATGGGACGCTGCCACGCGTCCCATCCTCACCCACTCGGTCTTCTCTCTCCTCTCCCACTGACACGCCACGCGC GTTGTCGGCGCGTGTCCTGCACGCGCCTAGCGTTCTCCAATCCGGAGCTGCCACGTGGCTCCGGATGCTCCTCTCAACAA TGTTGAACGGTTTCAACATTTTCCCAACTTCAACAACATTCAACAGACCAATGCAAGGGCTAAACATGTTTCAACAACAT TCAACATCAGTTTCAACAGACCATTGTACATGGTCTTAAAAGTTTCTATAGTGGATCCCACCATCAACATCAAATTTGTA TATTTTATTATTTATCTTCATTTATTAATTATCACCATCTAATTATATTAATTGTAAGTGTTTGTAATAAATACAAGCTC ATTTTTCAAGTCTAGTGTGGAGTATCTATTCCCACATACTCATATTTGTCATGTTGGAATTGAATATGTACTCCAATAGT AATAGATACTCATATAAGTATGTATTTAACATTAGATACTACCATTGGAGATGCTCTTACAAACACAAGTATTTCACATT ACTATATCTTATGTTAAAACATGTGCTAATCACCCTGATTCTCTGTTCCCTTTTCTGCTCCATTTATCTGGCTATGGAAT ACCAATAGTATTTTTAATAAATAAGTTATTACAAGAACTGTAAAAGTAGAAGGTAATTTTCAAAATTCTCTATGCATGAA AATTCTTCTACAGTTGATTCTGAAAACAAAATTAATTATGACAAGAGCGGGTAGCTTTTGGATGTCAAAACTGATTCTAA GAAAAAAGAAACTAATTCAAACATGCTATTACAGGGATCGAAATCGTTGAGAGGCTCTCCACCATGGGAATTGCTGTCAA CCTGGTGACATACATGATTGGAGTCATGCACTTCCCAAGCTCAACTGCAGCCAATACAGTGACTGACTTCATGGGCACAT CATTTCTCTTGTGTTTGCTTGGAGGTTTTCTAGCAGACTCCTTCCTTGGCAGATTCAAGACCATTGGAATATTTGCTTCC ATACAAACACTGGTTAGTTCCACTAGTAGTATGTTTGTATCCGCTTCTATTTTCTCAGAATGGCACTTAGAAACTACTCA CCTAAGCTTCTCCCCCATAATTGATTATAACTTTAGAATCCATTGCATAAGGATTTCCAAACATGCATGACCATGAGGAC TTATCATAAATCTCCAAGTTACATTTCTTATAAAGTATCAACTTTATTTTATGTATACTTCATGGTATTAACTTAGATGA GATGATAATTTCAGGGTACTGCTACATTAGCAATCTCAACAAAATTGCCACAGCTACGTCCCCCACCTTGCCATGCCATG GAAAATTGCAAGCCAGCCAATGGATTCCAAATGGGAATCTTATACATGGCTCTATATCTCATCGCACTCGGAACCGGTGG CTTGAAATCTAGTGTTTCAGGATTTGGTTCTGACCAATTTGATGTGAAAGATGAGAAGGAGAAGTCTCAAATGACCTATT TCTTCAACAGGTTTTTCTTCTTCATCAGTTTTGGAACTCTGGCAGCTGTGACAGTACTTGTTTATATCCAAGATGAAGTG AGTCGAAGTTGGGCCTATGGAATATGTTCTGTTTGCATGGTCATAGCCATTTTGGTGCTGTTATCAGGCACTAAGAGATA TAGGTACAAGAAGAGTGTGGGAAGCCCCATTGTCCACATTTTCCAAGTTATAGTTGCTGCAATTAAGAAAAGGAAGATGG AACTACCTTACAATGTTGGCTCTTTGTATGAGGACACTCCAGAGGATTTAAGAATAGAGCACACTGATCAGTTCCCGTAA GCTTATCTCAATATCTTCATCTACCCTAAACTCGTTCAGGAAATTGTGGCAGTTCTTCCAACAGATGACTCTCGAACCTT GAGAAAGTCATCTGTTGAAAATGAATATCATAGTTTCGGAACATGTTTACAATAAATTTTTTTGTGGTTTCATGACATTG TCTAAAGATTTCCTTTGTTTCTTCAATTTTATAGTTTCTTGGAGAAAGCAGCTATTGTGGCAGAAGGTGATTTTGAGAGG ACTTCATCAGGTTCTGCTCCAAACCCATGGAAACTTTGCTCATTGACAAGGGTAGAGGAGGTTAAAATGATGGTGAGGCT TCTACCAATATGGGCAACAACCATCATATTTTGGACCACATATGCACAAATGATCACCTTTTCAGTTGAGCAAGCATCCA CCATGGAAAGGAATATTGGAAATTTCCAAATCCCAGCAGGTTCCCTCACAGTCTTCTTTGTGGCAGCAATCCTAATCACT CTTGGTGTATATGATAGACTCATCATGCCCCTTTTGAAGAAGTGGAATGGTAAACCAGGTATGAGAAGAGAGAAGACAGT AATATATTTAGTTTACTTCAAAAACATTTGATCAATCCTCTGATTAAAATAAACAAAAGCATTATTCTGGTTAGTAAGGT CGGCTATATGAAGCAGAAATTCATATTAAAGATATTAGTCAGTTTTACATTGGCTGCTGAAAGCCTAACACAACCATCAT AGGCAGAGTTGGACAATACTTTGATTAATTAAAGATATCATTCAATATGGAATAGTTTTTTCATAATTAAGAGACAAATT GTTAATTATTCTATATCATAATATATATAACAGAAAGCAACATGTGTAACCCACACAACGTTGTTGGTATAATGGTATTG ATGCCTCTCTCAAAGTTAAATGTGCATGTTTGATAGCAAAACAGCAAAACCAACCTTGATTGCACTTTTTAACATTGATG TGTGTGTGTTGTCATCTGGTAATACAATAATTTAGACCAATAAAGTCAAAACAATCTGTGTTATAAAAGGAATTAACATA TACATTTTGTGTCTCTCAGGTTTCACCAACCTACAAAGGATTGGAATTGGACTTGCATTGTCCATTCTTGGAATGTTGGC TGCTTCTGTAGGTGAGATGAAACGTTTGTCCGTGGCTAAAGGAGCAAGTGGTCACAATACAACACTGCCCATAAGTGTTT TCCTTCTAATTCCACAGTTCTTTTTGGTTGGTGCTGGTGAAGCATTCATATACACAGGCCAGCTTGATTTCTTCATAACA CAATCACCAAAAGGAATGAAAACCATGAGCACCGGTCTCTTCCTCACAACTTTATCTCTCGGTTTCTTCGTCAGCAGTTT CCTTGTCGCGGTTGTGAAGAAAGTAACTGGGACAACAGATGGGCAGGGGTGGCTAGCTGACAACATAAACAAGGGAAGGC TTGACTTGTTCTATGCACTGCTTACCATACTGAGTTTCATCAATTTTGTAGCATTTGTGGTGTGTGCACTCTGGTACAAG CCAAACAAAGCTAAACCATCTATGCAAATGGGGGCAATCAAGGGTTCCTCGGTTGAGGAGAAGTGCTGA
CDS sequence (LotjaGi4g1v0270100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTTGGACAGTTTCAGATGCTGTGGACTATAAAGGTTTCCCTGCTGATAGGTCCAAAACTGGTGGTTGGGTACCTGC TGCTCTCATTTTAGGGATCGAAATCGTTGAGAGGCTCTCCACCATGGGAATTGCTGTCAACCTGGTGACATACATGATTG GAGTCATGCACTTCCCAAGCTCAACTGCAGCCAATACAGTGACTGACTTCATGGGCACATCATTTCTCTTGTGTTTGCTT GGAGGTTTTCTAGCAGACTCCTTCCTTGGCAGATTCAAGACCATTGGAATATTTGCTTCCATACAAACACTGGGTACTGC TACATTAGCAATCTCAACAAAATTGCCACAGCTACGTCCCCCACCTTGCCATGCCATGGAAAATTGCAAGCCAGCCAATG GATTCCAAATGGGAATCTTATACATGGCTCTATATCTCATCGCACTCGGAACCGGTGGCTTGAAATCTAGTGTTTCAGGA TTTGGTTCTGACCAATTTGATGTGAAAGATGAGAAGGAGAAGTCTCAAATGACCTATTTCTTCAACAGGTTTTTCTTCTT CATCAGTTTTGGAACTCTGGCAGCTGTGACAGTACTTGTTTATATCCAAGATGAAGTGAGTCGAAGTTGGGCCTATGGAA TATGTTCTGTTTGCATGGTCATAGCCATTTTGGTGCTGTTATCAGGCACTAAGAGATATAGGTACAAGAAGAGTGTGGGA AGCCCCATTGTCCACATTTTCCAAGTTATAGTTGCTGCAATTAAGAAAAGGAAGATGGAACTACCTTACAATGTTGGCTC TTTGTATGAGGACACTCCAGAGGATTTAAGAATAGAGCACACTGATCAGTTCCCTTTCTTGGAGAAAGCAGCTATTGTGG CAGAAGGTGATTTTGAGAGGACTTCATCAGGTTCTGCTCCAAACCCATGGAAACTTTGCTCATTGACAAGGGTAGAGGAG GTTAAAATGATGGTGAGGCTTCTACCAATATGGGCAACAACCATCATATTTTGGACCACATATGCACAAATGATCACCTT TTCAGTTGAGCAAGCATCCACCATGGAAAGGAATATTGGAAATTTCCAAATCCCAGCAGGTTCCCTCACAGTCTTCTTTG TGGCAGCAATCCTAATCACTCTTGGTGTATATGATAGACTCATCATGCCCCTTTTGAAGAAGTGGAATGGTAAACCAGGT TTCACCAACCTACAAAGGATTGGAATTGGACTTGCATTGTCCATTCTTGGAATGTTGGCTGCTTCTGTAGGTGAGATGAA ACGTTTGTCCGTGGCTAAAGGAGCAAGTGGTCACAATACAACACTGCCCATAAGTGTTTTCCTTCTAATTCCACAGTTCT TTTTGGTTGGTGCTGGTGAAGCATTCATATACACAGGCCAGCTTGATTTCTTCATAACACAATCACCAAAAGGAATGAAA ACCATGAGCACCGGTCTCTTCCTCACAACTTTATCTCTCGGTTTCTTCGTCAGCAGTTTCCTTGTCGCGGTTGTGAAGAA AGTAACTGGGACAACAGATGGGCAGGGGTGGCTAGCTGACAACATAAACAAGGGAAGGCTTGACTTGTTCTATGCACTGC TTACCATACTGAGTTTCATCAATTTTGTAGCATTTGTGGTGTGTGCACTCTGGTACAAGCCAAACAAAGCTAAACCATCT ATGCAAATGGGGGCAATCAAGGGTTCCTCGGTTGAGGAGAAGTGCTGA
Protein sequence (LotjaGi4g1v0270100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSWTVSDAVDYKGFPADRSKTGGWVPAALILGIEIVERLSTMGIAVNLVTYMIGVMHFPSSTAANTVTDFMGTSFLLCLL GGFLADSFLGRFKTIGIFASIQTLGTATLAISTKLPQLRPPPCHAMENCKPANGFQMGILYMALYLIALGTGGLKSSVSG FGSDQFDVKDEKEKSQMTYFFNRFFFFISFGTLAAVTVLVYIQDEVSRSWAYGICSVCMVIAILVLLSGTKRYRYKKSVG SPIVHIFQVIVAAIKKRKMELPYNVGSLYEDTPEDLRIEHTDQFPFLEKAAIVAEGDFERTSSGSAPNPWKLCSLTRVEE VKMMVRLLPIWATTIIFWTTYAQMITFSVEQASTMERNIGNFQIPAGSLTVFFVAAILITLGVYDRLIMPLLKKWNGKPG FTNLQRIGIGLALSILGMLAASVGEMKRLSVAKGASGHNTTLPISVFLLIPQFFLVGAGEAFIYTGQLDFFITQSPKGMK TMSTGLFLTTLSLGFFVSSFLVAVVKKVTGTTDGQGWLADNINKGRLDLFYALLTILSFINFVAFVVCALWYKPNKAKPS MQMGAIKGSSVEEKC
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 38 | 38 | - | – | |
Gene3D | 2 | 561 | 560 | 9.1E-196 | – | |
PANTHER | 3 | 570 | 568 | 1.2E-296 | – | |
PANTHER | 3 | 570 | 568 | 1.2E-296 | ||
SUPERFAMILY | 18 | 558 | 541 | 1.31E-25 | ||
CDD | 24 | 551 | 528 | 0.0 | – | |
Phobius | 39 | 58 | 20 | - | – | |
Phobius | 59 | 69 | 11 | - | – | |
TMHMM | 62 | 84 | 23 | - | – | |
Phobius | 70 | 89 | 20 | - | – | |
ProSitePatterns | 81 | 105 | 25 | - | ||
TMHMM | 89 | 111 | 23 | - | – | |
Phobius | 90 | 95 | 6 | - | – | |
Pfam | 92 | 515 | 424 | 5.7E-104 | ||
Phobius | 96 | 115 | 20 | - | – | |
Phobius | 116 | 134 | 19 | - | – | |
Phobius | 135 | 154 | 20 | - | – | |
TMHMM | 137 | 159 | 23 | - | – | |
Phobius | 155 | 183 | 29 | - | – | |
TMHMM | 180 | 202 | 23 | - | – | |
Phobius | 184 | 203 | 20 | - | – | |
Phobius | 204 | 208 | 5 | - | – | |
TMHMM | 206 | 228 | 23 | - | – | |
Phobius | 209 | 227 | 19 | - | – | |
Phobius | 228 | 323 | 96 | - | – | |
Phobius | 324 | 344 | 21 | - | – | |
TMHMM | 325 | 347 | 23 | - | – | |
Phobius | 345 | 363 | 19 | - | – | |
TMHMM | 362 | 384 | 23 | - | – | |
Phobius | 364 | 384 | 21 | - | – | |
Phobius | 385 | 403 | 19 | - | – | |
Phobius | 404 | 424 | 21 | - | – | |
TMHMM | 404 | 426 | 23 | - | – | |
Phobius | 425 | 443 | 19 | - | – | |
TMHMM | 441 | 463 | 23 | - | – | |
Phobius | 444 | 464 | 21 | - | – | |
Phobius | 465 | 484 | 20 | - | – | |
TMHMM | 483 | 505 | 23 | - | – | |
Phobius | 485 | 509 | 25 | - | – | |
Phobius | 510 | 528 | 19 | - | – | |
Phobius | 529 | 552 | 24 | - | – | |
TMHMM | 530 | 552 | 23 | - | – | |
Phobius | 553 | 575 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Oligopeptide transport | The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages. | ||
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi4g1v0270100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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