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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR018456
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We have found 54 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.454s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0021189.1
n.a. PREDICTED: peptide transporter PTR5-like isoform X1 [Cicer arietinum] gi|502129218|ref|XP_004500227.1| chr0 8605173 8607139 +
3 domain predictions
3 GO terms
Lj0g3v0099189.1
n.a. PREDICTED: peptide transporter PTR1-like isoform X1 [Cicer arietinum] gi|502131373|ref|XP_004500964.1| chr0 42022209 42025981 -
3 domain predictions
3 GO terms
Lj0g3v0287969.1
n.a. Peptide transporter PTR1 [Medicago truncatula] gi|357468661|ref|XP_003604615.1| chr0 149644651 149649977 -
3 domain predictions
3 GO terms
Lj0g3v0287979.4
n.a. Peptide transporter PTR1 [Medicago truncatula] gi|357468661|ref|XP_003604615.1| chr0 149653522 149657291 -
3 domain predictions
3 GO terms
Lj1g3v0987670.1
n.a. PREDICTED: peptide transporter PTR1-like isoform X1 [Cicer arietinum] gi|502104019|ref|XP_004492413.1| chr1 12622617 12624055 +
2 domain predictions
3 GO terms
Lj1g3v3329140.1
n.a. PREDICTED: probable peptide/nitrate transporter At5g13400-like [Glycine max] gi|356569101|ref|XP_003552744.1| chr1 37515615 37519030 +
2 domain predictions
3 GO terms
Lj1g3v3443680.1
n.a. Peptide transporter PTR3-B [Medicago truncatula] gi|357505729|ref|XP_003623153.1| chr1 39762959 39765606 +
2 domain predictions
3 GO terms
Lj3g3v0257310.1
n.a. PREDICTED: probable peptide transporter At1g52190-like [Glycine max] gi|356557281|ref|XP_003546946.1| chr3 1521173 1524441 -
2 domain predictions
3 GO terms
Lj3g3v0257320.1
n.a. PREDICTED: probable peptide transporter At1g52190-like isoform X1 [Cicer arietinum] gi|502081063|ref|XP_004486755.1| chr3 1528542 1533338 -
2 domain predictions
3 GO terms
Lj3g3v1876180.1
n.a. PREDICTED: probable peptide/nitrate transporter At3g54450-like [Glycine max] gi|356556821|ref|XP_003546719.1| chr3 24148439 24162298 -
2 domain predictions
3 GO terms
Lj3g3v2314200.1
n.a. PREDICTED: probable peptide transporter At1g52190-like [Glycine max] gi|356523024|ref|XP_003530142.1| chr3 28219483 28222067 -
2 domain predictions
3 GO terms
Lj3g3v2681670.1
n.a. PREDICTED: peptide transporter PTR1-like [Cicer arietinum] gi|502096156|ref|XP_004490642.1| chr3 32637097 32640547 +
2 domain predictions
3 GO terms
Lj3g3v3754380.1
n.a. PREDICTED: probable peptide/nitrate transporter At1g22540-like isoform 1 [Glycine max] gi|356543142|ref|XP_003540022.1| chr3 45493693 45495880 -
2 domain predictions
3 GO terms
Lj4g3v0012160.1
n.a. PREDICTED: probable peptide/nitrate transporter At1g59740-like [Glycine max] gi|356522117|ref|XP_003529696.1| chr4 155119 157893 +
2 domain predictions
3 GO terms
Lj4g3v0166160.1
n.a. PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356512257|ref|XP_003524837.1| chr4 1995991 2000239 -
2 domain predictions
3 GO terms
Lj4g3v0166160.2
n.a. PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356525018|ref|XP_003531124.1| chr4 1995991 2000239 -
2 domain predictions
3 GO terms
Lj4g3v0166160.3
n.a. PREDICTED: peptide transporter PTR2-like [Glycine max] gi|356512257|ref|XP_003524837.1| chr4 1995991 2000239 -
2 domain predictions
3 GO terms
Lj4g3v0166290.1
n.a. PREDICTED: peptide transporter PTR2-like [Cicer arietinum] gi|502141746|ref|XP_004504618.1| chr4 2048775 2053555 -
3 domain predictions
3 GO terms
Lj4g3v1119470.1
n.a. PREDICTED: nitrate transporter 1.7-like [Glycine max] gi|356567570|ref|XP_003551991.1| chr4 16837624 16842713 +
2 domain predictions
3 GO terms
Lj4g3v3061500.1
n.a. PREDICTED: probable peptide transporter At1g52190-like [Cicer arietinum] gi|502139576|ref|XP_004503821.1| chr4 40822804 40825593 +
2 domain predictions
3 GO terms
Lj5g3v1356090.1
n.a. PREDICTED: nitrate transporter 1.5-like [Cicer arietinum] gi|502146609|ref|XP_004506528.1| chr5 20652970 20656146 +
2 domain predictions
3 GO terms
Lj5g3v1356090.2
n.a. PREDICTED: nitrate transporter 1.5-like [Cicer arietinum] gi|502146609|ref|XP_004506528.1| chr5 20652970 20655752 +
2 domain predictions
3 GO terms
Lj5g3v1356090.3
n.a. PREDICTED: nitrate transporter 1.5-like [Cicer arietinum] gi|502146609|ref|XP_004506528.1| chr5 20652970 20656146 +
2 domain predictions
3 GO terms
Lj6g3v0597040.1
n.a. PREDICTED: peptide transporter PTR5-like isoform X1 [Cicer arietinum] gi|502129218|ref|XP_004500227.1| chr6 5953566 5955532 -
3 domain predictions
3 GO terms
LotjaGi1g1v0123500.1
n.a. Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7FVJ9|A0A1J7FVJ9_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0123500 LjG1.1_chr1 19602248 19606206 +
2 domain predictions
3 GO terms
LotjaGi1g1v0288200.1
n.a. Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A072U1U2|A0A072U1U2_MEDTR Proton-dependent oligopeptide transport family protein; Found in the gene: LotjaGi1g1v0288200 LjG1.1_chr1 69870845 69874484 +
3 domain predictions
3 GO terms
LotjaGi1g1v0424000.1
n.a. Peptide transporter; TAIR: AT5G01180.1 peptide transporter 5; Swiss-Prot: sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2; TrEMBL-Plants: tr|A0A072V2Y9|A0A072V2Y9_MEDTR Peptide transporter; Found in the gene: LotjaGi1g1v0424000 LjG1.1_chr1 91830707 91834509 +
3 domain predictions
3 GO terms
LotjaGi1g1v0424000.2
n.a. Peptide transporter; TAIR: AT5G01180.1 peptide transporter 5; Swiss-Prot: sp|Q9LFB8|PTR5_ARATH Protein NRT1/ PTR FAMILY 8.2; TrEMBL-Plants: tr|A0A072V2Y9|A0A072V2Y9_MEDTR Peptide transporter; Found in the gene: LotjaGi1g1v0424000 LjG1.1_chr1 91830720 91834412 +
3 domain predictions
3 GO terms
LotjaGi1g1v0552600.1
n.a. Major facilitator superfamily protein; TAIR: AT5G13400.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9LYR6|PTR49_ARATH Protein NRT1/ PTR FAMILY 6.1; TrEMBL-Plants: tr|I1N5E5|I1N5E5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0552600 LjG1.1_chr1 108420197 108424139 +
2 domain predictions
3 GO terms
LotjaGi1g1v0577700.1
n.a. Protein NRT1/ PTR FAMILY 5.5; TAIR: AT2G37900.1 Major facilitator superfamily protein; Swiss-Prot: sp|P0CI03|PTR28_ARATH Protein NRT1/ PTR FAMILY 5.6; TrEMBL-Plants: tr|A0A151RTQ2|A0A151RTQ2_CAJCA Peptide transporter PTR1; Found in the gene: LotjaGi1g1v0577700 LjG1.1_chr1 111717885 111728929 +
2 domain predictions
3 GO terms
LotjaGi3g1v0018700.1
n.a. Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|A0A151SHH1|A0A151SHH1_CAJCA Putative peptide transporter family; Found in the gene: LotjaGi3g1v0018700 LjG1.1_chr3 1951685 1959307 -
2 domain predictions
3 GO terms
LotjaGi3g1v0018700.2
n.a. Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|I1MCR8|I1MCR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0018700 LjG1.1_chr3 1955164 1959303 -
2 domain predictions
3 GO terms
LotjaGi3g1v0018800.1
n.a. Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|I1MCR9|I1MCR9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0018800 LjG1.1_chr3 1960985 1968431 -
2 domain predictions
3 GO terms
LotjaGi3g1v0211600.1
n.a. Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7HXS6|A0A1J7HXS6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211600 LjG1.1_chr3 31755809 31768080 +
3 domain predictions
3 GO terms
LotjaGi3g1v0211600.2
n.a. Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7HXS6|A0A1J7HXS6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211600 LjG1.1_chr3 31756569 31759493 +
3 domain predictions
3 GO terms
LotjaGi3g1v0211600.3
n.a. Peptide transporter, putative; TAIR: AT3G54140.1 peptide transporter 1; Swiss-Prot: sp|Q9M390|PTR1_ARATH Protein NRT1/ PTR FAMILY 8.1; TrEMBL-Plants: tr|A0A1J7HXS6|A0A1J7HXS6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0211600 LjG1.1_chr3 31763246 31768105 +
3 domain predictions
3 GO terms
LotjaGi3g1v0319300.1
n.a. Protein NRT1/ PTR FAMILY 5.5; TAIR: AT3G54450.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M1I2|PTR46_ARATH Protein NRT1/ PTR FAMILY 5.4; TrEMBL-Plants: tr|I1MIR8|I1MIR8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0319300 LjG1.1_chr3 67814529 67828841 +
2 domain predictions
3 GO terms
LotjaGi3g1v0367800.1
n.a. Protein nrt1 ptr family 1.2; TAIR: AT1G52190.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9M817|PTR6_ARATH Protein NRT1/ PTR FAMILY 1.2; TrEMBL-Plants: tr|I1KGM2|I1KGM2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0367800 LjG1.1_chr3 75382326 75385828 -
2 domain predictions
3 GO terms
LotjaGi3g1v0435600.1
n.a. Peptide transporter 1; TAIR: AT1G32450.1 nitrate transporter 1.5; Swiss-Prot: sp|Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3; TrEMBL-Plants: tr|M5X2X3|M5X2X3_PRUPE Uncharacterized protein; Found in the gene: LotjaGi3g1v0435600 LjG1.1_chr3 84690221 84695418 +
2 domain predictions
3 GO terms
LotjaGi3g1v0556300.1
n.a. Protein NRT1/ PTR FAMILY 5.5; TAIR: AT1G22540.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q0WP01|PTR9_ARATH Protein NRT1/ PTR FAMILY 5.10; TrEMBL-Plants: tr|I1LNN9|I1LNN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556300 LjG1.1_chr3 97427276 97430081 -
2 domain predictions
3 GO terms
LotjaGi3g1v0556300.2
n.a. Protein NRT1/ PTR FAMILY 5.5; TAIR: AT1G22540.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q0WP01|PTR9_ARATH Protein NRT1/ PTR FAMILY 5.10; TrEMBL-Plants: tr|I1LNN9|I1LNN9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556300 LjG1.1_chr3 97427968 97429998 -
2 domain predictions
3 GO terms
LotjaGi4g1v0001600.1
n.a. Major facilitator superfamily protein; TAIR: AT1G59740.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q93VV5|PTR16_ARATH Protein NRT1/ PTR FAMILY 4.3; TrEMBL-Plants: tr|A0A0S3RA52|A0A0S3RA52_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001600 LjG1.1_chr4 339029 342356 +
2 domain predictions
3 GO terms
LotjaGi4g1v0001600.2
n.a. Protein NRT1/ PTR FAMILY 1.2; TAIR: AT1G59740.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q93VV5|PTR16_ARATH Protein NRT1/ PTR FAMILY 4.3; TrEMBL-Plants: tr|A0A0S3RA52|A0A0S3RA52_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0001600 LjG1.1_chr4 339205 341836 +
2 domain predictions
3 GO terms
LotjaGi4g1v0016600.1
n.a. Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|I1K3A6|I1K3A6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 LjG1.1_chr4 2126872 2131604 -
2 domain predictions
3 GO terms
LotjaGi4g1v0016600.2
n.a. Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|A0A0L9T8C7|A0A0L9T8C7_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0016600 LjG1.1_chr4 2127285 2131575 -
2 domain predictions
3 GO terms
LotjaGi4g1v0017000.1
n.a. Peptide transporter; TAIR: AT2G02040.1 peptide transporter 2; Swiss-Prot: sp|P46032|PTR2_ARATH Protein NRT1/ PTR FAMILY 8.3; TrEMBL-Plants: tr|I1KRN5|I1KRN5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0017000 LjG1.1_chr4 2171602 2176621 -
3 domain predictions
3 GO terms
LotjaGi4g1v0183700.1
n.a. Nitrate transporter NRT1-2; TAIR: AT1G69870.1 nitrate transporter 1.7; Swiss-Prot: sp|Q8RX77|PTR21_ARATH Protein NRT1/ PTR FAMILY 2.13; TrEMBL-Plants: tr|I1N195|I1N195_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0183700 LjG1.1_chr4 39458889 39464176 -
2 domain predictions
3 GO terms
LotjaGi4g1v0270100.1
n.a. Nitrate transporter 1.1; TAIR: AT2G26690.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SZY4|PTR27_ARATH Protein NRT1/ PTR FAMILY 6.2; TrEMBL-Plants: tr|V7CA08|V7CA08_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0270100 LjG1.1_chr4 63558935 63569683 +
2 domain predictions
3 GO terms
LotjaGi4g1v0270100.2
n.a. Nitrate transporter 1.1; TAIR: AT2G26690.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SZY4|PTR27_ARATH Protein NRT1/ PTR FAMILY 6.2; TrEMBL-Plants: tr|V7CA08|V7CA08_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0270100 LjG1.1_chr4 63559147 63567935 +
2 domain predictions
3 GO terms
LotjaGi4g1v0270100.3
n.a. Nitrate transporter 1.1; TAIR: AT2G26690.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SZY4|PTR27_ARATH Protein NRT1/ PTR FAMILY 6.2; TrEMBL-Plants: tr|V7CA08|V7CA08_PHAVU Uncharacterized protein; Found in the gene: LotjaGi4g1v0270100 LjG1.1_chr4 63559147 63567935 +
2 domain predictions
3 GO terms