Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi4g1v0348600 |
Transcript ID | LotjaGi4g1v0348600.5 |
Related isoforms 8 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Pyruvate, phosphate dikinase; TAIR: AT4G15530.1 pyruvate orthophosphate dikinase; Swiss-Prot: sp|Q39734|PPDK_FLABR Pyruvate, phosphate dikinase, chloroplastic; TrEMBL-Plants: tr|A0A0B2P153|A0A0B2P153_GLYSO Pyruvate, phosphate dikinase; Found in the gene: LotjaGi4g1v0348600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:72734790..72736796) extracted from Lotus japonicus Gifu genome v1.2.
ATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGG AATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTG ACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTA TCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGCAGGTTTGTCCCCCTTCTTATGATGCTTCTCTTAGAAATATAATA TAAAAATATTCAATTGTGGCTTCTGCAAACAGCTTAAGCTTTTGAGATCGTTGGTTCATGATATGGTATCAGCGCTTCTC TGACCAAGCGCTCTAGAGTACTATCTTTGTTGCCCTCATTATTGTAATTAAAAAAGTTGAGTCTCAACATAAGATAGATA GGTCCGTGCATAGTCCACGTTTGAAGCCTAATGAGCTCTCGTGTGTGGGGGCATGTTTGAATTATAATATAAAACTATTC ATGCCTCTTCATCCATATGTAATGCAAATCTGCAGTCACAAATGAAGCATCATGGCTCATAATATATTCAATTTATGGAT CAATTAGTAAAATAACAATTCCTTATATTTGACAATTGAAATTTTGTGAGCAGGCTAGGAATCTCATACCCAGAATTGAC TGAGATGCAGGCCCGTGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGG TTCCACTTATCGGTACACCTCAGGCATGGTCCTTTCCCTTTTTTATTCTCTTGTGTTATTCTTCCAATTGTTTCACATGT ATGATGTATCATATATGAAAAAAAATCCCTATGCTATACTTTGGAACATTATTTATCTTGCATTCCTTTTTCCTTAACGA TGTATCTCTTGAAATATATAACATGAAGAACTACTTAGAGTTCTGACATTGATGAAACCCTTGTAAATATTATATAAGCC CAAATTTTGTTTGCAGGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTT CCTCTCTAAGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGGTAAAACTTATATTG TTATATCTTGAAGATTCACACTTTAACATATAATATGCTCGTTTTATCACCTTGAAACCAAGATTATCATTTGCTGCAAC AACAGTTCCAAGGACCATTTTGTCATCATCTTATTACTATACTTTCTAACTTTATAATCCATTTGTGTAGATTGCAAAGG AGGCAGAGTTCTTTTCATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTT CTTCCTATATACCTAGCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAAGTTTCTTAACGTACATTTTATGATTACA TGAAGGATGGTTTCTGAGTTTGAGTTGTTGACAATACTTGCAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAAC TTTGCACAGAAAAGGGTCGTGCCGCAAGACCAAAATTAAAGGTATAAAAGAGTAACTTACCAATTGAGATTTAAACCAAC AAATTTCATTACTCATATATTTATTCTTACTATGTGAAATTTTGTGATATAAACATCTGCTTCATTCATTACACCCCTGC AATTAATCTATTAAGTTGATTATCAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATTCTTTGCT CAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGGTAAAATTTTCAGTTCTACATTATCTGCAAAAGAAATATTAG TATTTTCAATTGTCACACTGAAAAATCTGAGGACTCCTTTGCAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAGA AGTTTAA
CDS sequence (LotjaGi4g1v0348600.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGG AATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTG ACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTA TCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGCAGGCTAGGAATCTCATACCCAGAATTGACTGAGATGCAGGCCCG TGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGGTTCCACTTATCGGTA CACCTCAGGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTCTCTA AGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGATTGCAAAGGAGGCAGAGTTCTT TTCATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATATACC TAGCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTGCACA GAAAAGGGTCGTGCCGCAAGACCAAAATTAAAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATT CTTTGCTCAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAG AAGTTTAA
Protein sequence (LotjaGi4g1v0348600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEHIVSELTSQTGMKEEEIFSRIEKL SEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSISNHGITVLPEIMVPLIGTPQELRHQVSVIRNVAEKVFSEMGSSL SYKVGTMIEVPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLANGILQHDPFEVIDQKGVGQLIKLCT EKGRAARPKLKIGVCGEHGGEPSSVAFFAQLGLDYVSCSPFRVPIARLAAAQVEV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 293 | 293 | 8.4E-165 | – | |
PANTHER | 1 | 293 | 293 | 8.4E-165 | ||
SUPERFAMILY | 1 | 294 | 294 | 1.05E-103 | ||
Gene3D | 1 | 295 | 295 | 4.0E-137 | ||
Pfam | 15 | 294 | 280 | 2.7E-85 | ||
ProSitePatterns | 185 | 203 | 19 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
Biological process | Pyruvate metabolic process | The chemical reactions and pathways involving pyruvate, 2-oxopropanoate. | ||
Biological process | Phosphorylation | The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide. | ||
Molecular function | Transferase activity, transferring phosphorus-containing groups | Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor). | ||
Molecular function | Pyruvate, phosphate dikinase activity | Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate. |
Expression pattern of LotjaGi4g1v0348600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…