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LotjaGi4g1v0348600.5

Overview

Field Value
Gene ID LotjaGi4g1v0348600
Transcript ID LotjaGi4g1v0348600.5
Related isoforms 8
Lotus japonicus genome version Gifu v1.2
Description Pyruvate, phosphate dikinase; TAIR: AT4G15530.1 pyruvate orthophosphate dikinase; Swiss-Prot: sp|Q39734|PPDK_FLABR Pyruvate, phosphate dikinase, chloroplastic; TrEMBL-Plants: tr|A0A0B2P153|A0A0B2P153_GLYSO Pyruvate, phosphate dikinase; Found in the gene: LotjaGi4g1v0348600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:72734790..72736796) extracted from Lotus japonicus Gifu genome v1.2.

ATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGG AATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTG ACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTA TCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGCAGGTTTGTCCCCCTTCTTATGATGCTTCTCTTAGAAATATAATA TAAAAATATTCAATTGTGGCTTCTGCAAACAGCTTAAGCTTTTGAGATCGTTGGTTCATGATATGGTATCAGCGCTTCTC TGACCAAGCGCTCTAGAGTACTATCTTTGTTGCCCTCATTATTGTAATTAAAAAAGTTGAGTCTCAACATAAGATAGATA GGTCCGTGCATAGTCCACGTTTGAAGCCTAATGAGCTCTCGTGTGTGGGGGCATGTTTGAATTATAATATAAAACTATTC ATGCCTCTTCATCCATATGTAATGCAAATCTGCAGTCACAAATGAAGCATCATGGCTCATAATATATTCAATTTATGGAT CAATTAGTAAAATAACAATTCCTTATATTTGACAATTGAAATTTTGTGAGCAGGCTAGGAATCTCATACCCAGAATTGAC TGAGATGCAGGCCCGTGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGG TTCCACTTATCGGTACACCTCAGGCATGGTCCTTTCCCTTTTTTATTCTCTTGTGTTATTCTTCCAATTGTTTCACATGT ATGATGTATCATATATGAAAAAAAATCCCTATGCTATACTTTGGAACATTATTTATCTTGCATTCCTTTTTCCTTAACGA TGTATCTCTTGAAATATATAACATGAAGAACTACTTAGAGTTCTGACATTGATGAAACCCTTGTAAATATTATATAAGCC CAAATTTTGTTTGCAGGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTT CCTCTCTAAGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGGTAAAACTTATATTG TTATATCTTGAAGATTCACACTTTAACATATAATATGCTCGTTTTATCACCTTGAAACCAAGATTATCATTTGCTGCAAC AACAGTTCCAAGGACCATTTTGTCATCATCTTATTACTATACTTTCTAACTTTATAATCCATTTGTGTAGATTGCAAAGG AGGCAGAGTTCTTTTCATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTT CTTCCTATATACCTAGCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAAGTTTCTTAACGTACATTTTATGATTACA TGAAGGATGGTTTCTGAGTTTGAGTTGTTGACAATACTTGCAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAAC TTTGCACAGAAAAGGGTCGTGCCGCAAGACCAAAATTAAAGGTATAAAAGAGTAACTTACCAATTGAGATTTAAACCAAC AAATTTCATTACTCATATATTTATTCTTACTATGTGAAATTTTGTGATATAAACATCTGCTTCATTCATTACACCCCTGC AATTAATCTATTAAGTTGATTATCAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATTCTTTGCT CAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGGTAAAATTTTCAGTTCTACATTATCTGCAAAAGAAATATTAG TATTTTCAATTGTCACACTGAAAAATCTGAGGACTCCTTTGCAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAGA AGTTTAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0348600.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGATAATGGCCGTTACGCCGGAGCAGAGGAAAGCTGCACTAGACTTGTTGCTACCATATCAGAGATCAGATTTTGAGGG AATCTTTCGTGCAATGGATGGCCTCCCAGTGACAATCCGATTGTTAGATCCTCCACTTCATGAATTTCTTCCAGAAGGTG ACTTGGAGCATATTGTGAGTGAACTAACTTCCCAAACAGGCATGAAAGAAGAAGAAATCTTCTCAAGGATTGAAAAACTA TCAGAAGTGAATCCCATGCTCGGTTTTCGTGGCTGCAGGCTAGGAATCTCATACCCAGAATTGACTGAGATGCAGGCCCG TGCAATTTTTCAGGCTGCTGTTTCAATAAGTAACCATGGTATTACAGTTCTTCCTGAGATCATGGTTCCACTTATCGGTA CACCTCAGGAATTAAGGCATCAAGTGAGCGTAATCAGAAATGTTGCTGAGAAAGTGTTCTCTGAGATGGGTTCCTCTCTA AGCTATAAGGTTGGAACTATGATTGAAGTTCCAAGAGCTGCGCTTGTTGCAGATGAGATTGCAAAGGAGGCAGAGTTCTT TTCATTTGGAACCAATGACCTTACTCAGATGACATTTGGATACAGTAGAGATGATGTTGGCAAATTTCTTCCTATATACC TAGCCAACGGGATTTTGCAGCATGATCCATTTGAGGTAATTGACCAGAAAGGTGTGGGTCAACTCATCAAACTTTGCACA GAAAAGGGTCGTGCCGCAAGACCAAAATTAAAGATTGGAGTATGTGGAGAGCATGGTGGGGAACCTTCTTCTGTTGCATT CTTTGCTCAACTTGGGCTTGACTATGTATCATGTTCTCCTTTTAGGGTTCCAATTGCTAGGCTAGCGGCAGCTCAAGTAG AAGTTTAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0348600.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MIMAVTPEQRKAALDLLLPYQRSDFEGIFRAMDGLPVTIRLLDPPLHEFLPEGDLEHIVSELTSQTGMKEEEIFSRIEKL SEVNPMLGFRGCRLGISYPELTEMQARAIFQAAVSISNHGITVLPEIMVPLIGTPQELRHQVSVIRNVAEKVFSEMGSSL SYKVGTMIEVPRAALVADEIAKEAEFFSFGTNDLTQMTFGYSRDDVGKFLPIYLANGILQHDPFEVIDQKGVGQLIKLCT EKGRAARPKLKIGVCGEHGGEPSSVAFFAQLGLDYVSCSPFRVPIARLAAAQVEV
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22931:SF39
1 293 293 8.4E-165 –
PANTHER
PTHR22931
1 293 293 8.4E-165
IPR010121
SUPERFAMILY
SSF51621
1 294 294 1.05E-103
IPR015813
Gene3D
G3DSA:3.20.20.60
1 295 295 4.0E-137
IPR040442
Pfam
PF02896
15 294 280 2.7E-85
IPR000121
ProSitePatterns
PS00742
185 203 19 -
IPR023151

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003824
Molecular function Catalytic activity Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
Subterm of
GO:0006090
Biological process Pyruvate metabolic process The chemical reactions and pathways involving pyruvate, 2-oxopropanoate.
Subterm of
GO:0016310
Biological process Phosphorylation The process of introducing a phosphate group into a molecule, usually with the formation of a phosphoric ester, a phosphoric anhydride or a phosphoric amide.
Subterm of
GO:0016772
Molecular function Transferase activity, transferring phosphorus-containing groups Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to another (acceptor).
Subterm of
GO:0050242
Molecular function Pyruvate, phosphate dikinase activity Catalysis of the reaction: ATP + phosphate + pyruvate = AMP + diphosphate + 2 H(+) + phosphoenolpyruvate.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0348600.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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