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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0392700 |
| Transcript ID | LotjaGi4g1v0392700.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-galactosidase; TAIR: AT3G26380.1 Melibiase family protein; Swiss-Prot: sp|P14749|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr|I1K4F3|I1K4F3_SOYBN Alpha-galactosidase; Found in the gene: LotjaGi4g1v0392700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77108383..77114479) extracted from Lotus japonicus Gifu genome v1.2.
CACACACATGATGTCACGTTTTCCTCACCCACCGCATGCGTGGAACCGACACTCTTCAACCCTCGTCAATGTTTACTATT TTCTTCTCATTTTCCCCTCCTTTTCCCTCGTGCGCTCACCCAATTCCACATCAACCAAACACAAGAAAATTCCATTTATC GAACTCTTCACTGAAACAATTCATCCAACACATTGCTGACAAGCATAGAAATTCCATGAATAGAAGTAGCAGAAACGTTC ACTCCTCTGTAATTGTGACCGCATAGCGTAACGTGAACAAGTGTACCGTACGTCTTCACCATGGATTAAAGAAGGTAGCG ACAAAAATGAGAATGTGAGACCCTACGAAGAAATGCCACATCTGCATTCAAGTAATAGCAATAGCGTTAAACGTCACCGT TATTGTGTTACTATCTATACCATTATCTTATTTTCTTTCTTATTATGTGGTCTAAACTTTATTAGTATTTAACTCTGGGA AGTGTTGTCTGGTGGAACAGTTGTACCAGAAGCAATAATGAAGTGTTTCACTCTGTCTCTGTGTTTACTCTCTTTCTGGA TTCTCCTTGTTCTTTGTTTTCAGAGGTATGCAATTGCAACCTTGGCTTCTTCTACTTCTCTGGTTTCATATTGTGAGCTT CACTTCCATGTTTTAATGCTACATTTTGGATATTATTCTGATAGATCTATGCAGGGAAATTAGATTTGAAAAATGAGCAA TAATAGTAATTAATGTAGCGAGTGTTCTGAGTTTCTACAGCTTTTTGGATTAGTTTAATGATGCCACCGTTTTTTCACTC AGATTTGCTTGTTTTAGTCATTATCAGTTTGGATCTATAAATTGTGTAAATTCATATTCTAAAATGAATGGAAATAGTAG TTTTCATGAAACAAATGTTTTGAGGTGCATTTTGAGGACTCTTGTCCTTTTGTTTTCATCTTATTATATGACCAGAGGCC AGAGCTAACTCACATTTATTTGATGTTGCTGGGAGATTTTTGTAAGCTACTTTTGAGAGGCTGGTTTTATGAATTGCTTT AAATATGAACATGCTATTTGGTGACTGGATGTGGAAAATTGTCTTCAAAAGTTGCATTGAATATGGTTCAAAGGGATTAG GATCCTCTCATGTGAAACATTGCGTATATCTCTCTTCATGGATATTCAAATGGTCCAACACTCCAACCCATTTATTGCAT ATGAAGAGAGAAAAATACTTAATTTCAACATGGGAGAACATGAGAGAGTTTCCACAAGAGAGGATCCTGTGGCAACTTTG AAAATCAATGGCATAATTTCACTTTTGACTTAGGTCCTTTAAGTAGGAAGCCTAAGTATGATTACTTTGAATTGTGAATT TGGAGCAGACTAGAAACTAGTCCGCATAGATTTCCTCATTTCAGTATTTATGTTAACTACCATAGATGTGATTTTCACTT ATTACTATGTAGCAGTATAAAGAAGCTTCAGTTCAGAACTTCAAACCTTATAAGCAAGGTTCAATTTTGTGCATTTTAGC TACAGAATATAAATTGAAACTATATTAAGTAGTAACATAAATTGCTCATTCATTTCCAAAGTGCAACCTAGTGTCCCTGG ATCTTTGAGGCCCTGTTCTGTCATTATTTGTTAGACAAATAAGTAAAGAAAGATCTAATATAAGTTATATGTGGCTGTTT CTTTTCAGTGTGTCATCTCAAAATTTATACCAGAGTGCCCTACAGCAAGCTAGCGTCCCACCAAGAGGGTGGAATTCTTA TGATTCCTTTTGCTGGACAATTTCTGAAGCAGAATTCTTGCAGAGTGCTGCAATAGTTTCTCAACGTCTCCGTCCTCATG GATATGAGGTATAAATAGTAAATACTGCAAGGAACTATAGGTTATACATCATTTGACTAGTAGTGCTTCAGTTAGATATA GAACCTGTTTGGGTGAAAGTCAAAGAGCGTTTATTGGAGTTATCTAGTGCTATTTCTAGTAGATAAGCTCCCATAAGTAC ATATCGGCTCATAGACTGATTTATTTCCTTCAATCAATCCTTGTAGTTTGTTGTGGTGGATTACCTCTGGTATAGGAAGA AAGTCCCGGGTGCTAGCGTTGATTCTCTTGGATTCGACGTGATTGATAAATGGGGAAGGATGCTTCCTGACCCAGGAAGG TGGCCTTCTTCCGTAGGTGGGAAGGGGTTCCGTGAAGTAGCTAATAAAGTGCACAGTTTGGGTTTGAAGTTCGGGATTCA TGTTATGAGAGGTATAAGCACACAAGCCGTCAATGCAAACACCCCTATCCTAGATACAACAAAGGTATTGCTTTGCATTT CTGTTAAAGGTTGATTTTCTCTTCATTTCTGTATTAGATATTGGTAGTAGTGAATGCCTTATGTGATACATTTTGTGTAA ATAAAAAACACTACAATACAAGCCAAAATCATTCTTTTTATCTCTATCTAAACATTGTTACTGACCTTCATTCCTTCCTA TTTCGGCTTCCTAGGGAGGTGCTTATCAAGAAGACGGGCGAGTATGGTATGCAAAAGACATAGCAATGCCAGAGAGGGCT TGTGTGTGGATGCATAATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCAGGGAGAGCTTTTTTGAGGTCCCTTTATGA GCAGTATAATGCTTGGGGTGTTGATTTTGGTACTGGGACCACTAATTTATAATATGCTTATGATGCACTATCACAACATT TATTTATGTCATAGACAACAAACATGATTATTTTAGATAATTTACTGCATTATCTTCACCTAAGTTTCATAAGTGAAGCA ATTGTAACTTTTTTCAATGAAGATAATTCTTGAAAGTGAGACAGTGTTGGTATTTCAGTGTTACCATAAACTTCAAGTGA TTAAACTTAGTCAACTATAGATTCCTTTTGCCATGCTTTTCAAACCTGTGTAAATGATTAAACCTGCAAAGCATTGCTGG TTTATTCATAATGTGTTGACTTAGGGTCTATAGTTTATATAAAAGAAGCAATAAAAATTACTCAGTGGACTTACTGCAGA CTTGCATCATCATGTATGAAAACATAAGCAGTTCTGGCTATGCTGTGGAAGTAATTTTGATATATTTCTTCCTTCCTTGC AGTGAAACATGACTGTGTGTTTGGAGCCGATTTGGATTTAAGTGAAATAACGTATGTATCAGAGGTATTCTTCAGTTCCT TATCCTTATCCTATTCGCTCCCTCTCATTCTGATATCAACAAAGATCGATAACGACTTGGCAAAGATTTGTATTATCAAA CTTATCATATGACATATCATACCAGCTTCTCAGGGAGTTTAATCGCCCCGTAGTGTATTCTCTGTCTCCTGGGAGCAATG TCCATCCAGCCATAGCCAAGAAGGTCATTGGACTAGTAAACATGTATCGTATAACAGGAGATGACTGGGATCAATGGAAG GATGTCAAGACTCATTTTGATGTAACAAGGTGATAAGTTGTTTATATCATAGTTTAAGATATTTTTATCAGTGTTCAGGG TATGTTGCAATCGTGCTACTGCTTCATCTATGTTCTGTTCCTCTTTCAGCACATTGCATAACTTAAGTTCATTTAATTCT GAATCAGCGAGTTTTCTGCGGCTAATATGATTGGCGGAGGAAAAGGTTTGAAGGGTAGTTCCTGGCCTGATTTGGACATG CTACCATTTGGATGGCTAACTGATCCAGGTAATGAGACTGGGCTGCTACATTTCATTTTGTCCCGTATGAGTTCATGACC CTCAGTATTTGTATGGGGTCGGTCATTACTGTGAATTTATGGGTTCAAATGACCCCCATTTTATTTGCAGGTTCAAATGA CGGTCCACACAGGTTTAGTAATCTCAATCTAGAAGAAAAAAGGACACAGGTATTATTAAAAAAGTATAACTGAGCTGCTT TCCTATATGTTCACGTGCCTACTTATGTAATTGCATTATAATGGATTGAGTGAATTCTTTCTTATCTGGCAGATGACTTT GTGGGCTTTGGCAAAGTCTCCACTTATGTTTGGAGGGGATGTGCGGAAGATTGATCCCCCGACATACGAAATTATCACGA ATCCTACCCTGCTTGAGATTAATTATTTCAGCTCAAATAATATGGAGGCATGTGAGCCATCTAACTCTCTTATTTTGGGG ATAATTGCATATGAAGCATATAAACTTATCACGAAATGCAATTACAGTTTCCTTATGTCACAAGTCCAAAGAATTTGAAG CATGGACATCAGCATCCTGAAGAAAAAGAGAGAAGATCTAAGAAAGGAATGAAAACATATACACATTCATTAGGCCTCAC TGGCTGCAGTGAATCAACGGCAAGTGGTTGGTCTAGCGAAAGTCTTAACCAAAATCTTAAAAGAATCTGTTGGAAAAGGA GTTTAGAAAACAAGCCGCAGTCCCTTTTCTGTGTACACAAGAAGGAACTTCAGTTCAGATTGTAATCGTGCTTTATCTTT CTCTGCAGTTTTTATATATCTTTTATTTAACTATTTGTGTTTTTATTAACAATAGCATTGATAGAATTTGTTATGTTGTT ATAGAGATGGAGAGAGTACGCATCAAGAGAACTATCGAGGGAAACATCAATTAGTTGCAACCGACCGAATGAGATTTTGC TTGGATGGTTCTCCGAAACGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGTACTTTTTCTCCTTGCAGATGGGATTCAAA TCAGGTATGTTATGTTGCAATCCATTTTCATGTCCAAGAGTGGCATGCAGCTCTTAATCTTTAGAAAGAGAATCTTGTCT ATGTTTGCAATTTGTCTTTAGTCATGCAGATGCAAAAAAAAAATTCATTACATCTGTCTTTTATGTTAATTTTCACCCCT ATCTAAAGTCTAAACAACATATGCCTTTGTCAATTTGTATTTTGTTGATATTTGTTGATTCTATTAGAATCTGATGTTTT GGTCTTTTAACAGATCTGGGAGCTAAACCCCAATGGTACCCTGGTAAATAGTTACTCTGGTCTCTGTGCAACAGTAGAGG ATGTCAAAGGTAAATTTTGATACATATCCCATGTTTTAGACCTAGTTTCATGAGGTTGTATTTGTATACTTTTTTTCATG TTTTCCTTCCTTGTGTTTATTACTCATAATGCAAATTGGTCATTCATGCAGCTGATACTAAACCGGGTGGGGTTCGCTCA TGGGTTGCAACTGGAAGAAAAGGTATCTTTGTCATGGATTTCTTAATCATGAGTCATGAAGGACATTTAAGCACTGAAAT TACATATATGGATTGATACAAATGATATCATATACTTCCAGAACAACACAAAATGCATGTTTAGTCCTCCTGTCTCTTTT CATGCATTTGCGCACAACAAAAACATTTTGAAGTTATTTTTTGTCTAACCCCTAATATTTTATATGTCTATATAGGAGAA ATCTATTTGGCTTTCTTCAATCTGAGTGAACAGAAAACGGTGATACATGCACAGACATCATATCTGGCCAAGGCTATTCC TGGCAGACGCTTTAGGTCTTGTCGGGGAAAGGAAGTGTGGAGTGGCAAGGACGTTGTAACCCCGCAGGGGAATTTAGCAA TGAACGTGGAAACTCATGGATGTGCACTATTTGTTCTGCATTGCAATTAGTCCAGCTTCAGCATCTCATTGCTGAGCCTT CAATTTTTTTTATAATTGATCATGCTTCACTTTTGAGGATGGGTAAAATTTGAGTGTTTTAAGGAGGATAGGTAATAGTA GTCGTGTTAGTAAGCCTCTTGTGTTTTTCCCTAGTATATGTGATGATTATTTTGAATGAACGCATTTTATGAAATAAAAT GATGGCAGAATGGGCATGTACCTTACATATGATATGATATTGCTGTAACAAGATTGAACTTTTTTTTTTTTGAAATGAAG ATTGAACTAACTTCAAAGGTCAAGATAGAATGCAGTAATGACAGCCAATTACCAGAAGAAATTGTCTAATTCAGTGTCAT CTCTGTTCTACAAAAGTAATATAGAGAGATTAAAAATGAAGTTCCAACAGAGCTGAGGGTAACAACAGAATAGAATAGCT ATTTATTAGAGAATGCA
CDS sequence (LotjaGi4g1v0392700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGTGTTTCACTCTGTCTCTGTGTTTACTCTCTTTCTGGATTCTCCTTGTTCTTTGTTTTCAGAGTGTGTCATCTCA AAATTTATACCAGAGTGCCCTACAGCAAGCTAGCGTCCCACCAAGAGGGTGGAATTCTTATGATTCCTTTTGCTGGACAA TTTCTGAAGCAGAATTCTTGCAGAGTGCTGCAATAGTTTCTCAACGTCTCCGTCCTCATGGATATGAGTTTGTTGTGGTG GATTACCTCTGGTATAGGAAGAAAGTCCCGGGTGCTAGCGTTGATTCTCTTGGATTCGACGTGATTGATAAATGGGGAAG GATGCTTCCTGACCCAGGAAGGTGGCCTTCTTCCGTAGGTGGGAAGGGGTTCCGTGAAGTAGCTAATAAAGTGCACAGTT TGGGTTTGAAGTTCGGGATTCATGTTATGAGAGGTATAAGCACACAAGCCGTCAATGCAAACACCCCTATCCTAGATACA ACAAAGGGAGGTGCTTATCAAGAAGACGGGCGAGTATGGTATGCAAAAGACATAGCAATGCCAGAGAGGGCTTGTGTGTG GATGCATAATGGTTTCATGAGTGTAAATACAAAGTTGGGAGCAGGGAGAGCTTTTTTGAGGTCCCTTTATGAGCAGTATA ATGCTTGGGGTGTTGATTTTGTGAAACATGACTGTGTGTTTGGAGCCGATTTGGATTTAAGTGAAATAACGTATGTATCA GAGCTTCTCAGGGAGTTTAATCGCCCCGTAGTGTATTCTCTGTCTCCTGGGAGCAATGTCCATCCAGCCATAGCCAAGAA GGTCATTGGACTAGTAAACATGTATCGTATAACAGGAGATGACTGGGATCAATGGAAGGATGTCAAGACTCATTTTGATG TAACAAGCGAGTTTTCTGCGGCTAATATGATTGGCGGAGGAAAAGGTTTGAAGGGTAGTTCCTGGCCTGATTTGGACATG CTACCATTTGGATGGCTAACTGATCCAGGTTCAAATGACGGTCCACACAGGTTTAGTAATCTCAATCTAGAAGAAAAAAG GACACAGATGACTTTGTGGGCTTTGGCAAAGTCTCCACTTATGTTTGGAGGGGATGTGCGGAAGATTGATCCCCCGACAT ACGAAATTATCACGAATCCTACCCTGCTTGAGATTAATTATTTCAGCTCAAATAATATGGAGTTTCCTTATGTCACAAGT CCAAAGAATTTGAAGCATGGACATCAGCATCCTGAAGAAAAAGAGAGAAGATCTAAGAAAGGAATGAAAACATATACACA TTCATTAGGCCTCACTGGCTGCAGTGAATCAACGGCAAGTGGTTGGTCTAGCGAAAGTCTTAACCAAAATCTTAAAAGAA TCTGTTGGAAAAGGAGTTTAGAAAACAAGCCGCAGTCCCTTTTCTGTGTACACAAGAAGGAACTTCAGTTCAGATTAGAT GGAGAGAGTACGCATCAAGAGAACTATCGAGGGAAACATCAATTAGTTGCAACCGACCGAATGAGATTTTGCTTGGATGG TTCTCCGAAACGAAAGGTTACTTCTAAAGAGTTCAAGAGAGGTACTTTTTCTCCTTGCAGATGGGATTCAAATCAGATCT GGGAGCTAAACCCCAATGGTACCCTGGTAAATAGTTACTCTGGTCTCTGTGCAACAGTAGAGGATGTCAAAGCTGATACT AAACCGGGTGGGGTTCGCTCATGGGTTGCAACTGGAAGAAAAGGAGAAATCTATTTGGCTTTCTTCAATCTGAGTGAACA GAAAACGGTGATACATGCACAGACATCATATCTGGCCAAGGCTATTCCTGGCAGACGCTTTAGGTCTTGTCGGGGAAAGG AAGTGTGGAGTGGCAAGGACGTTGTAACCCCGCAGGGGAATTTAGCAATGAACGTGGAAACTCATGGATGTGCACTATTT GTTCTGCATTGCAATTAG
Protein sequence (LotjaGi4g1v0392700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKCFTLSLCLLSFWILLVLCFQSVSSQNLYQSALQQASVPPRGWNSYDSFCWTISEAEFLQSAAIVSQRLRPHGYEFVVV DYLWYRKKVPGASVDSLGFDVIDKWGRMLPDPGRWPSSVGGKGFREVANKVHSLGLKFGIHVMRGISTQAVNANTPILDT TKGGAYQEDGRVWYAKDIAMPERACVWMHNGFMSVNTKLGAGRAFLRSLYEQYNAWGVDFVKHDCVFGADLDLSEITYVS ELLREFNRPVVYSLSPGSNVHPAIAKKVIGLVNMYRITGDDWDQWKDVKTHFDVTSEFSAANMIGGGKGLKGSSWPDLDM LPFGWLTDPGSNDGPHRFSNLNLEEKRTQMTLWALAKSPLMFGGDVRKIDPPTYEIITNPTLLEINYFSSNNMEFPYVTS PKNLKHGHQHPEEKERRSKKGMKTYTHSLGLTGCSESTASGWSSESLNQNLKRICWKRSLENKPQSLFCVHKKELQFRLD GESTHQENYRGKHQLVATDRMRFCLDGSPKRKVTSKEFKRGTFSPCRWDSNQIWELNPNGTLVNSYSGLCATVEDVKADT KPGGVRSWVATGRKGEIYLAFFNLSEQKTVIHAQTSYLAKAIPGRRFRSCRGKEVWSGKDVVTPQGNLAMNVETHGCALF VLHCN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 26 | 26 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 26 | 26 | - | – | |
| Phobius | 1 | 2 | 2 | - | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Phobius | 3 | 21 | 19 | - | – | |
| PANTHER | 9 | 645 | 637 | 2.0E-243 | – | |
| PANTHER | 9 | 645 | 637 | 2.0E-243 | ||
| Phobius | 22 | 26 | 5 | - | – | |
| Phobius | 27 | 645 | 619 | - | – | |
| Gene3D | 31 | 389 | 359 | 5.1E-104 | ||
| PRINTS | 34 | 53 | 20 | 1.6E-8 | ||
| SUPERFAMILY | 37 | 386 | 350 | 1.93E-52 | ||
| CDD | 40 | 386 | 347 | 1.16598E-80 | ||
| PRINTS | 128 | 149 | 22 | 1.6E-8 | ||
| Pfam | 211 | 386 | 176 | 1.1E-11 | ||
| PRINTS | 344 | 365 | 22 | 1.6E-8 | ||
| MobiDBLite | 400 | 420 | 21 | - | – | |
| MobiDBLite | 405 | 420 | 16 | - | – | |
| SUPERFAMILY | 500 | 560 | 61 | 9.95E-7 | ||
| CDD | 529 | 562 | 34 | 0.00570499 | ||
| Gene3D | 558 | 645 | 88 | 4.1E-13 | ||
| SUPERFAMILY | 561 | 643 | 83 | 1.7E-5 | – | |
| Pfam | 563 | 642 | 80 | 4.5E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi4g1v0392700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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