Domain Predictions — View

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SSF50370

Source: SUPERFAMILY

Description

No description is available for this domain.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 13

Transcript	Name	Description	Predicted domains	Domain count
Lj0g3v0285999.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: endoglucanase-like [Glycine max] gi\|356541382\|ref\|XP_003539156.1\|	Domains CYTOPLASMIC_DOMAIN G3DSA:2.80.10.50 G3DSA:3.20.20.80 IPR000772 IPR001547 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF0 SM00458 SSF50370 SSF51445 TMhelix TRANSMEMBRANE cd00161	17
Lj1g3v2996650.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Endoglucanase E1 [Medicago truncatula] gi\|357502161\|ref\|XP_003621369.1\|	Domains G3DSA:2.80.10.50 G3DSA:3.20.20.80 IPR000772 IPR001547 IPR013781 IPR017853 PF00150 PTHR31263 PTHR31263:SF10 SSF50370 SSF51445	11
Lj1g3v3948200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–		Domains G3DSA:2.80.10.50 IPR000772 PTHR31257 PTHR31257:SF2 SSF50370 cd00161 mobidb-lite	7
Lj4g3v2717180.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: endoglucanase E1-like [Glycine max] gi\|356511059\|ref\|XP_003524249.1\|	Domains G3DSA:2.80.10.50 G3DSA:3.20.20.80 IPR000772 IPR001547 IPR013781 IPR017853 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF0 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51445 SignalP-noTM_EUK cd00161	18
Lj6g3v0574710.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	PREDICTED: alpha-galactosidase 1-like [Cicer arietinum] gi\|502135602\|ref\|XP_004502389.1\|	Domains G3DSA:2.60.40.1180 G3DSA:2.80.10.50 G3DSA:3.20.20.70 IPR000772 IPR002241 IPR013780 IPR013785 IPR017853 PF16499 PR00740 PS50231 PTHR11452 PTHR11452:SF14 SSF50370 SSF51011 SSF51445 cd00161	17
LotjaGi1g1v0509200.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp\|P54583\|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr\|G7L487\|G7L487_MEDTR Hydrolyzing O-glycosyl compounds hydrolase; Found in the gene: LotjaGi1g1v0509200	Domains G3DSA:3.20.20.80 IPR001547 IPR017853 IPR035992 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF46 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51445 SignalP-TM SignalP-noTM	16
LotjaGi1g1v0639600.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Ricin B lectin domain-containing protein; TAIR: AT2G39050.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp\|Q945P1\|EULS3_ARATH Ricin B-like lectin EULS3; TrEMBL-Plants: tr\|V7CUG7\|V7CUG7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0639600	Domains G3DSA:2.80.10.50 IPR000772 IPR035992 IPR040249 PTHR31257 PTHR31257:SF2 SSF50370 cd00161 mobidb-lite	9
LotjaGi3g1v0379700.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp\|P23548\|GUN_PAEPO Endoglucanase; TrEMBL-Plants: tr\|A0A072TZ08\|A0A072TZ08_MEDTR Hydrolyzing O-glycosyl compounds hydrolase; Found in the gene: LotjaGi3g1v0379700	Domains G3DSA:2.80.10.50 G3DSA:3.20.20.80 IPR001547 IPR017853 IPR035992 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF50 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51445 SignalP-TM SignalP-noTM	17
LotjaGi4g1v0392100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp\|P54583\|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr\|K7KQT2\|K7KQT2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0392100	Domains G3DSA:2.80.10.50 G3DSA:3.20.20.80 IPR000772 IPR001547 IPR017853 IPR035992 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF51 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51445 SignalP-noTM cd00161	18
LotjaGi4g1v0392700.4 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alpha-galactosidase; TAIR: AT3G26380.1 Melibiase family protein; Swiss-Prot: sp\|P14749\|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr\|I1K4F3\|I1K4F3_SOYBN Alpha-galactosidase; Found in the gene: LotjaGi4g1v0392700	Domains G3DSA:2.60.40.1180 G3DSA:3.20.20.70 IPR000772 IPR002241 IPR013780 IPR013785 IPR017853 IPR035992 IPR041233 NON_CYTOPLASMIC_DOMAIN PF16499 PF17801 PR00740 PTHR11452 PTHR11452:SF79 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51011 SSF51445 SignalP-TM SignalP-noTM cd00161 cd14792 mobidb-lite	27
LotjaGi4g1v0392700.5 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alpha-galactosidase; TAIR: AT3G26380.1 Melibiase family protein; Swiss-Prot: sp\|P14749\|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr\|I1K4F3\|I1K4F3_SOYBN Alpha-galactosidase; Found in the gene: LotjaGi4g1v0392700	Domains G3DSA:2.60.40.1180 G3DSA:3.20.20.70 IPR000772 IPR002241 IPR013780 IPR013785 IPR017853 IPR035992 IPR041233 NON_CYTOPLASMIC_DOMAIN PF16499 PF17801 PR00740 PTHR11452 PTHR11452:SF79 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51011 SSF51445 SignalP-TM TMhelix cd00161 cd14792 mobidb-lite	27
LotjaGi6g1v0095100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Alpha-galactosidase; TAIR: AT3G26380.1 Melibiase family protein; Swiss-Prot: sp\|P14749\|AGAL_CYATE Alpha-galactosidase; TrEMBL-Plants: tr\|I1LNG1\|I1LNG1_SOYBN Alpha-galactosidase; Found in the gene: LotjaGi6g1v0095100	Domains G3DSA:2.60.40.1180 G3DSA:3.20.20.70 IPR000772 IPR002241 IPR013780 IPR013785 IPR017853 IPR035992 IPR041233 NON_CYTOPLASMIC_DOMAIN PF16499 PF17801 PR00740 PS50231 PTHR11452 PTHR11452:SF79 SIGNAL_PEPTIDE SIGNAL_PEPTIDE_C_REGION SIGNAL_PEPTIDE_H_REGION SIGNAL_PEPTIDE_N_REGION SSF50370 SSF51011 SSF51445 SignalP-TM SignalP-noTM cd00161 cd14792	27
LotjaGi6g1v0096100.1 View transcript LORE1 v3.0 Genome browser Expression Atlas (ExpAt)	–	Glycosyl hydrolase family 5 protein; TAIR: AT1G13130.1 Cellulase (glycosyl hydrolase family 5) protein; Swiss-Prot: sp\|P54583\|GUN1_ACIC1 Endoglucanase E1; TrEMBL-Plants: tr\|I1LKM8\|I1LKM8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0096100	Domains CYTOPLASMIC_DOMAIN G3DSA:3.20.20.80 IPR000772 IPR001547 IPR017853 IPR035992 NON_CYTOPLASMIC_DOMAIN PF00150 PTHR31263 PTHR31263:SF51 SM00458 SSF50370 SSF51445 TMhelix TRANSMEMBRANE	15

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain	Source	Observations	Saturation (%)
TRANSMEMBRANE	Phobius	1	7.69