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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0400300 |
| Transcript ID | LotjaGi4g1v0400300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aminotransferase; TAIR: AT2G22250.2 aspartate aminotransferase; Swiss-Prot: sp|E9L7A5|PAT_PETHY Bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase; TrEMBL-Plants: tr|I1KT56|I1KT56_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0400300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:77773549..77778651) extracted from Lotus japonicus Gifu genome v1.2.
TTAGAAGAAAAGTTAAAATTGTATATGTTATGAAGAGTTACCGCAAGCAGCCAAGGAAGGACCTGACTCGAGATGATGTG TAGTCTAAACACGTCACATCCTAGAAGCACTTACCCATAATCAAGCAGTTGCAAACGAAAAGGTCCACATACCCAATTCT CAACAGTCACATAAAAGCTCGAGAGATCATATCAAGGCAGCACCGAGTTCGAAGTTTCAAGGATACGTGGTGGAATGAAC AACCTAGATTAGTCAGTTTTCTTTTAAAGTAAGAGATTAATCCCCTCATTTATACAAGGAGCTATTTTTGCAAGATTAAT CCCCTCATTTATACAAGGAGCTATTTTTGCAAACTACAAAACCAAACGTGCAAACAACCAACCTTCCATTTTAATCTACA AAAATGTGTGCAAAGCTGAGCTGACTATGTTTTACCAGAAAGTTGAATTGAAGTTGAAGCTGCAATAGCATAGCTTCATT CACCAACTCTCCCTCACCAACCCCTTCTACCAACCTTCATCTACCTCTTCTTCTCGTCTCACTTCACTGCGTTCCATTTT CTTCATCACAACACAACCTACTCTCTCTCTCTCTCTCGCCAATTCGCACATGGCCAACACGCTGTACAACGCCACCACAT GCCGAATCCCTATCGGCGGCGACCACCAATGTCTCGCCGTAAATCGCAACGTCTCCAGATCCCTCTCCTTCTGCTCAAAC CTTACCACGCTTCCTCTCAAGTGAGTCCTTCTTCCAATTTCACTCCCTCACTCTCTTCTTTCATCAATAATATTTCTGGG TTTTCATTGCAGAGCAATGGAGTTTAACGCGGGGAATCATTCAGGGGCAATAACGGTGGTGAAGGCTGCGAAATCCGATT TTGATGAAAGGGGCATTGACATTTCATTGAGCCCACGAGTCAACGCTGTGAAGCCGTCCAAGACCGTCGCCATCAGCGAC CAAGCCACCGCTCTCGTCGAAGCTGGCGTTCCCGTGATTCGATTGGCGGCTGGAGAGCCTGATTTTGACACACCTGCTGT CGTAGCTGAGGTCAACGCTCTTCGCATTCTACTTTTCATTTGTAGAAATCTGTTTTTTATGCCCCTTTTTTTGTGTTGAT TTTGTAATGGCTTTTTTGGATAGGCTGGGATCAATGCAATTCGTGAAGGGTACACGAGGTACACCCCGAATGCCGGAACG TTAGAGCTACGTCAAGCAATTTGTCATAAGCTGAAGGGTTAGTGTGATGATGATTATAGTATATGCTTTTCTTTGTTGAT TGTGAGAGATGGGGTTTTGACTATATGTTAGATGAATTGTTGTTGCAGAGGAGAATGGGATTACTTATACTCCTGATCAG GTTGTGGTTAGTAATGGAGCCAAGCAGAGTATTGCTCAGGCAGTGCTTGCAGTTTGCTCTCCAGGAGATGAGGTGAGTAA AGTGGGCTAGTTTATACTCATAAGCATAAGCATTAGACTAAACGGGCTTAGTTTATACTCATAAGCTTTAGAAAATACTA CTTAATGTGTGTTTGAATACCAGTTGAGTTAATGTGAAAGAACTTTCATCCCAATCTGTAGTGTTCCGTTCACTTTTTGC CTCAAAGTGAGTGCTAATGTCTTTTACCATTGACGCCAATGATTGTCCAATCGTAGCCGCATGCGAAGTCATTTGGGTTG GGTATGAACTGTGCAGGGATACTTTAATTGGAACAAAGTCATTTGAATTATTCAAACTCTTTATGTTTTGCCATTATCCT TGATGTGTTAGAAAGTTCTCGTGATGATTGTGCTCACCTTTGGATGCCATCTTGTATATGTTTGTAGATTTTGGCATTAT CATTCTGAAATATGCCTGAACTTATTGACATGCCTTGTTTGTTCAAAAGATTCAACAACTCTGGCCTTTTATTTTCTCAA GCCTTTGCTGCATCTTTTATTCCTCTGTTAGTCTGTTTTATCACTTTATCAGATATTATGGGTCTAGTGAGCCTTGTGCT TACTAGGGTAAAAATTATGCAAATAAAAAAGCCACTCCATGCTGTCCACATATTCCCATGCATAAAAATGTGTCTTGATT TGTATTTGGACAAATTATTGCATATTTTTCCTTTTGCTCACTATGGTGTGAATATTTCAGGTCATAATTCCAGCTCCTTT CTGGGTTAGTTACCCAGAAATGGCAAGGATGGCTGATGCAACACCTGTGATTCTTCCAACCTCAATATCTGATAATTTCC TATTGGATCCCAAACGCCTTGAATCCATAATTACTGAGAAATCAAGACTGCTTATTTTTTGTTCACCATCAAACCCAACA GGATCCGTCTACCCCAAGAAATTACTTGAAGAGATAGCCCAGATTGTAGCAAAGTACCCAAGGCTTCTGGTACAGTCATA CATTCGGAACGAGTTCACAAATGCAACTTAGATTACAGTTCCTTGCTTTTAAAACCTTAAAAAAATTTATGCAGGTTATC TCTGATGAAATTTATGAAAACATCATCTATGCACCAGCAACACATACTAGCTTTGCATCTCTACCAGGAATGTGGGACAG AACACTAACTGTGAATGGATTTTCTAAGGTTAGTCTTTATGTCATGTTCTCTTTCTGTGAGAGTTGTATCTACTAATCCT CCCTACCCCAGAAAAAAAACCTTGTTCCTATAACTTATTTGACTTGTTTTTGGTGTTTGTGTTGTTGATTCCTCGTTCCT CTTTTCTACTCAATGCCTGTGCTGTATTTCATAGTATGGTTATAAATGATGACATTGTGACCTTTGAATTGGATTCCTGA TGCTTTAAACTATTTCACTGTAGTCCTTTGCAATGACTGGTTGGCGGCTTGGATACATCGCTGGTCCAAAACATTTTGTT GCAGCATGTGGAAAGATACAAAGTCAGGTATGCTGCAGTTTTAATTTGCCACTCACGCCAGTCTTATTCCATATCGTTCC TATCTTCATTACCTTTAGCTTTAAGAAACTTTTTAGCATTCATTTGAAATGAGTTAGTGTACTGATGCTATTTGATATTA CACAGGATGTTCTGACTGATGCATTTTATTGATTTTAGTTCACTTCAGGAGCCAGTAGCATTTCGCAGAAAGCTGCTGTT GCTGCATTAGGACTAGGCTATGCTGGCGGCGAGGCTGTTTCTACCATGGTGAAAGCATTTAGGGAGCGAAGGGATTTCTT GGTTAAAAGTTTTGGAGAGATCGAAGGTGTTAAAATATCAGAACCCCAGGTGCAAATTCATTTATTTTATTTGCTTATTC CCTAATAGTTATTCTCTTTTTGTTTTGTCTCTTCCTCTTCCCATCTGCTTTTCCACTCATAAATTTATACTTTCTTTCCC TTTGCAGGGAGCATTCTATCTATTCATTGATTTCAGCTTCTGCTATGGAAGAGAAGCTGAAGGATTTGGCAAAATTGAGG ATTCTGAATCCCTCTGTCGATATCTGCTGGATAAAGGCCAGGTATACTCAAGATTCTAGGGATAGTTTATGAGCAGGAAA AGTTCGAAGTCAAGAAAGAATTAAAGAACAACTGTTATTCGCAAAAATGATTTTCTCTTTTTAAAGTGCAACAACGACTG AAAAAATGATTATGGTTAGACATCCTTTGGCCAATGCAAACAGACGCTATTACGTATTTCAAGACAAAAAGTGAACGAAC TCTTATGGATTATGATTAAAATCCGCTCACTTGTTGAACTTTCGATGTCTCATAATTGAGTATTTCGGTATTTCTGTTTT GGCTTACAGGTAGCACTGGTGCCCGGAAGTGCTTTCGGAGATGATACTTGTGTTCGCATCTCTTATGCAGCATCCCTTAC TACCCTACAGGCTGCTGTAGAGAGGATTAAGAAAGCTCTTATCCCTCTAAGCTCAGCTGCACTTGTTTAATGTTAATGGT TGTTGTAATGGTTGTATTTTATTTTTGGGTTGTCAATGTGTTATCTATTTAGGCTGTGTGGGCTTTTTCCATTAATAAAG TGGGTTGCCAACTGTCTCATTAATAATTTATTTGAAATTCTAGTGAAAAAGTTGTATCTTTTTATTGTTTGTTGCATTGG TTGGTGCAAGGGAATTGTCCCACACCAACTAGGGCTGTCCAACTTTTTTGGGCCCGACCGAAACCGACCGGCCCGCTACC AAAAAAGGCCTTCTCGGTTCGGTCGGGTCGGGTGGCGGGTTGAGTAAGGGAGAAAAACCGGCTCCATTTGGGTTGGTTCG GTCGGTTACGGTTTGGAGCCTGGTCCGACCGAACCCAATATAAAAAAAAAATTTCACCCGGCCCAATAAGGCCCAAACCC AACCTAAACTAAACCTAATAATCCGGCTCCTCTCTCTTTCTCTTCACTTCTTCCTCTTCTTCTTCTTCTCTCAATTCTCA AACCCTACCTCTCACTCTCAAACCCGCCGCCGCCACCACCCTTCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCT TCTTCTTCTTCTTCTTCTTCTCTAAAACCTTACCTCTCAAACCCGCCGCCGCCACCACCCTTCTCCTCTTCTTCTTCTTC TCTCAAACCCTACCTCTCAAACCCGCCACCACCACCCTTCTCCCCTTCTTCTTCTTCTCTCCAAACCCTAGCCGCCACCA CCCTTCTCCTTATCCTCTGCGCCCTCACACATCTCAAACCCTAGCGGCCTAGCCACTCCACCACCACACTCCACAGTTCT CCTCATCCTCCTGCCACCACCCTTCTCAAACCCTAGCCACTCCACCACCACAGTGCATGGCTTTTTCCTTCACACGTCTC AAACCTCCATGCTTCTCTGATCCGAAAGAGTTTGTTCATCTTCATTGCCATCGATTTTGATGTGAAATCGCAAGGATGAA GTGAACAATCTCTTTTGCATGAGGAAAGCAATGGAAAACTTGGGGTGTCCACCGGTCAATCGCAAGGATAAAACCCAGAG GCGACAAACCCTGAAGGAGGACAAAGAGGATGAAGAACCCATGGTCCACCGCCACAGATCTGCCCTGAATCATCATGCAA GAGAGCTTCCTGAGTCCTTTGTCTCCTTATTTTTTTGATTTTTCTTGTTTTGTTATAATTTTC
CDS sequence (LotjaGi4g1v0400300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAACACGCTGTACAACGCCACCACATGCCGAATCCCTATCGGCGGCGACCACCAATGTCTCGCCGTAAATCGCAA CGTCTCCAGATCCCTCTCCTTCTGCTCAAACCTTACCACGCTTCCTCTCAAAGCAATGGAGTTTAACGCGGGGAATCATT CAGGGGCAATAACGGTGGTGAAGGCTGCGAAATCCGATTTTGATGAAAGGGGCATTGACATTTCATTGAGCCCACGAGTC AACGCTGTGAAGCCGTCCAAGACCGTCGCCATCAGCGACCAAGCCACCGCTCTCGTCGAAGCTGGCGTTCCCGTGATTCG ATTGGCGGCTGGAGAGCCTGATTTTGACACACCTGCTGTCGTAGCTGAGGCTGGGATCAATGCAATTCGTGAAGGGTACA CGAGGTACACCCCGAATGCCGGAACGTTAGAGCTACGTCAAGCAATTTGTCATAAGCTGAAGGAGGAGAATGGGATTACT TATACTCCTGATCAGGTTGTGGTTAGTAATGGAGCCAAGCAGAGTATTGCTCAGGCAGTGCTTGCAGTTTGCTCTCCAGG AGATGAGGTCATAATTCCAGCTCCTTTCTGGGTTAGTTACCCAGAAATGGCAAGGATGGCTGATGCAACACCTGTGATTC TTCCAACCTCAATATCTGATAATTTCCTATTGGATCCCAAACGCCTTGAATCCATAATTACTGAGAAATCAAGACTGCTT ATTTTTTGTTCACCATCAAACCCAACAGGATCCGTCTACCCCAAGAAATTACTTGAAGAGATAGCCCAGATTGTAGCAAA GTACCCAAGGCTTCTGGTTATCTCTGATGAAATTTATGAAAACATCATCTATGCACCAGCAACACATACTAGCTTTGCAT CTCTACCAGGAATGTGGGACAGAACACTAACTGTGAATGGATTTTCTAAGTCCTTTGCAATGACTGGTTGGCGGCTTGGA TACATCGCTGGTCCAAAACATTTTGTTGCAGCATGTGGAAAGATACAAAGTCAGTTCACTTCAGGAGCCAGTAGCATTTC GCAGAAAGCTGCTGTTGCTGCATTAGGACTAGGCTATGCTGGCGGCGAGGCTGTTTCTACCATGGTGAAAGCATTTAGGG AGCGAAGGGATTTCTTGGTTAAAAGTTTTGGAGAGATCGAAGGTGTTAAAATATCAGAACCCCAGGGAGCATTCTATCTA TTCATTGATTTCAGCTTCTGCTATGGAAGAGAAGCTGAAGGATTTGGCAAAATTGAGGATTCTGAATCCCTCTGTCGATA TCTGCTGGATAAAGGCCAGGTAGCACTGGTGCCCGGAAGTGCTTTCGGAGATGATACTTGTGTTCGCATCTCTTATGCAG CATCCCTTACTACCCTACAGGCTGCTGTAGAGAGGATTAAGAAAGCTCTTATCCCTCTAAGCTCAGCTGCACTTGTTTAA
Protein sequence (LotjaGi4g1v0400300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MANTLYNATTCRIPIGGDHQCLAVNRNVSRSLSFCSNLTTLPLKAMEFNAGNHSGAITVVKAAKSDFDERGIDISLSPRV NAVKPSKTVAISDQATALVEAGVPVIRLAAGEPDFDTPAVVAEAGINAIREGYTRYTPNAGTLELRQAICHKLKEENGIT YTPDQVVVSNGAKQSIAQAVLAVCSPGDEVIIPAPFWVSYPEMARMADATPVILPTSISDNFLLDPKRLESIITEKSRLL IFCSPSNPTGSVYPKKLLEEIAQIVAKYPRLLVISDEIYENIIYAPATHTSFASLPGMWDRTLTVNGFSKSFAMTGWRLG YIAGPKHFVAACGKIQSQFTSGASSISQKAAVAALGLGYAGGEAVSTMVKAFRERRDFLVKSFGEIEGVKISEPQGAFYL FIDFSFCYGREAEGFGKIEDSESLCRYLLDKGQVALVPGSAFGDDTCVRISYAASLTTLQAAVERIKKALIPLSSAALV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 58 | 479 | 422 | 7.0E-222 | – | |
| PANTHER | 58 | 479 | 422 | 7.0E-222 | – | |
| SUPERFAMILY | 76 | 470 | 395 | 5.23E-114 | ||
| Gene3D | 99 | 466 | 368 | 1.2E-132 | ||
| Pfam | 104 | 466 | 363 | 1.5E-72 | ||
| CDD | 106 | 468 | 363 | 7.04398E-114 | – | |
| Gene3D | 135 | 357 | 223 | 1.2E-132 | ||
| ProSitePatterns | 307 | 320 | 14 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Pyridoxal phosphate binding | Interacting selectively and non-covalently with pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6. |
Expression pattern of LotjaGi4g1v0400300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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