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LotjaGi4g1v0447400.4

Overview

Field Value
Gene ID LotjaGi4g1v0447400
Transcript ID LotjaGi4g1v0447400.4
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Protein kinase family protein; TAIR: AT4G28880.1 casein kinase I-like 3; Swiss-Prot: sp|Q93Z18|CKL3_ARATH Casein kinase 1-like protein 3; TrEMBL-Plants: tr|I3S5W6|I3S5W6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0447400
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr4:81980630..81983749) extracted from Lotus japonicus Gifu genome v1.2.

ATGGAGCGTATCGTTGGCGGCAAATACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATCTACCTCGGTGA GTATTCAATTGATTCCACAACAACTGTTGATTCTTCGTTTATCTGTTCTGATCGCGCTTTTTTCCCTTGCAGCTACGCAT ATTGATACGTTTGAGATCGTTGCAGTCAAGATAGTGAGTCTCTCTGTTCTTACTTTTCATATTCGCTATCTGATTCTGTG CCCTAATTTATGAACACTATTGCTGATTGCGATTTTTTCGTGTATGATTATATTGCATGAGTCAGTTCTGATTGGTGCTC ACTGGCAATTAGGTTTTTAATTCACATAAAATTGAGTTGTTTACGTGTTTATGATACATTGGTACTTACTAGTTACTACT CTCTATTCGGTGTTGTTGCAGGAGAACAGTAAAACTAAGCATCCACAACTGCTTTATGAGGCAAAACTCTACAATATTCT TCAAGGAGGAAGTATGTATTTTGCAATTTGCAGTGTTAAGCTTCTTCTTTTTTCGCGTGTGTTATTGTTCTAAAATTTTG AATTTGGTCACACTTATTAATTTGTTGATTGGTATGCAGGTGGCATTCCGGGCACGAGATGGTCTGGGGTAGACGGGGAG GATAACGTGCTTGTTCTTGATTTGCTGGGACCGAGTCTCGAGGATCTTTTCGTGTATTGTGGAAGGAAGTTTTCGTTGAA GACAGTGTTAATGTTAGCTGATCAAATGGTATGCTGCTGCTACATTTTGAAAAATTTGGGGGCACAACAACTGACCCTTC ATGCTCACTTTTATCTGTTATAGTCTTGCATTTTACTTCTGAAAACCTGTTAATTTTATCTGTTATAGTTCTACACTTGA TATTAATTCTTCTTTTCAAATTTGGGGCAGATCACTAGAATAGAATATGCACATTCTAAAGGGTTTTTACACAGGGATAT TAAACCCGATAACTTCCTCATGGGACTTGGACGGAAGGCCAACCAGGTAACCTTCTTGTACTTGCCCTTCCTTCCACTAT GTATGTATTTGTTAAGGTTCCATGTATGTGTAATTATGCTGTTCTTTTCAGGTTTACATAATTGATTTTGGGCTGGCAAA ACGATATCGGGACTCCTCAACCAATCGCCACATCCCTTACAGGTAGTTCTATGATTTCATTTTCTTTATTTTGAAGATTC TTTTTCCGTGTAATAATACTCTAACAATTGCAACACAGGGAGAACAAGAACTTAACAGGGACTGCACGTTATGCTAGTTG CAATACTCATCTTGGGATTGGTAAGTCTGAAGTTAGATGTTATTAACCCTTCACCCTGAATGGATGTTAACTCTTGCTGG CTTGCTATATTATTTGCAGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTTTGTACTTCCTCAGAGG AAGGTGTGCCATTCTGCTCTACTTGGTTTTTTCCTAATGTATTTTGTCAGTCTAATATCTGTTGAGATGATTGAACGAAA TGTCCTAACTTTTATATAACTTATTATTGTGTTCAGTCTTCCTTGGCAAGGTCTGAAGGCTGCAACAAAGAAGCAGAAGT ATGATAAAATATGTCAGAAGAAACTATCAACTCCTATTGAGGTAGGTGTTTAGGCATTTATTTGCGATGTGAAGGCCTCC TTCCCCTAAAGTCCCAAACAAAACAAAACAAAAAAGATTTACTCTTTTGTTTGTTATTTTCCAAAGGTACTATGCAAATC TCATCCTGTTGAGTTTGCTTCATACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGGATTCTTGA AGCGCCTATTTCGGGACCTATTTGCTCGAGAAGGTTATTGTTCTTTTCATTATTTGAATAACATATAATCAAAGGAGTTG CGTCTTTCTGTTGGTGTGCTTTTGAATACATTTAAATACTGGGAATTTGATTAACATAATATCTTACTAAGATCAAAGTA AAGGGAACTTTTTTCCTTAAAATAAAAAATTAATAATATACTCTGTTAGATTATTTAGAAGATGCAACACTTGTACAAAA GTGTTATTTTGATATTTCATTTCTATGCCAAGTATAACCTTTCCTCCCTCTATTTTGCCTTTCTTGATGTATCAGGTTAT GACTTTGATTATGTTTTTGATTGGACCATTTTGAAGTATCAGCAATCACAAAAGAATGCAGTGCAGCCCTCCTTATCTGT AAGTATATTTTTTTCTTTTGCCATGTGCATGTGTGCATGTGTGTTTTTAGGGGAGGGGGGCGCTACTCATGGTTTTGAAT CTTGAATCTTTCCATGCTTCTGACAATATTGAATTTTGTCTAGTTGCAGCCAGTTCCTGTAGCAAGTAACAGTCGTGGTA TTCCAATGGATGCTGACAACCACCAAGGTTGGTGCACCTTAAATAAGCTGTCATTTATAGGGGTTTCCTATCAAGAAATA AACTTGTGTTGAATGCAAAACAAATTCATAGTAAGAGTGACATTTACATGGATAACCAGCAATGTTGGCTGAATTCTTTA TGTTTGTAAAATTTTAATTAGATTTGGTCAGTCTAGGAAGACAGATAAAGTAGCCTTTAGTTTTCTACTTAAACAAATTT TAATTTGATATTATCTAATTCGTAGGTCTTAATGCATATTCAGGGCACGTCAAAGAGCGCATTAGATCAGGCAATGCTGC TACTTCTGGTGTTAAAATTCAGTTGAAATCTCCAGTTGGTAGAAATTTGAGTTCTGAAAATCCTCTTGACAAGAATGTAA GTCATCTTTCTTAGTAATTTAATTTTTTCTGCTGTTGCTTTGTTGCAATACTGAAGTCACATCTCTCTTATTGTACAGTA TTATGTCTAAAATTGACTAGATCAGTATTTAGCAAGCATTATTTTATTATTTTTTTTGTGTAGATTTTTGGAGAATCAAA TATGCCATCTACTTCATATTCTGCTGGTGCTTCAAATCGGACCTCCTTGAAACCTGCCTTTTCTGCTGAAGCTTCCAACC CTGGACAAGGGCAAGGCAGTAAAATTGCCCCTTCAAGTAGTTGGATGTCATCTCTGCAGCGCATTTCTTCTGCCAAATAA
Download Genomic Sequence

CDS sequence (LotjaGi4g1v0447400.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGAGCGTATCGTTGGCGGCAAATACAAGCTCGGCCGCAAGATCGGAAGCGGATCCTTCGGTGAAATCTACCTCGCTAC GCATATTGATACGTTTGAGATCGTTGCAGTCAAGATAGAGAACAGTAAAACTAAGCATCCACAACTGCTTTATGAGGCAA AACTCTACAATATTCTTCAAGGAGGAAGTGGCATTCCGGGCACGAGATGGTCTGGGGTAGACGGGGAGGATAACGTGCTT GTTCTTGATTTGCTGGGACCGAGTCTCGAGGATCTTTTCGTGTATTGTGGAAGGAAGTTTTCGTTGAAGACAGTGTTAAT GTTAGCTGATCAAATGATCACTAGAATAGAATATGCACATTCTAAAGGGTTTTTACACAGGGATATTAAACCCGATAACT TCCTCATGGGACTTGGACGGAAGGCCAACCAGGTTTACATAATTGATTTTGGGCTGGCAAAACGATATCGGGACTCCTCA ACCAATCGCCACATCCCTTACAGGGAGAACAAGAACTTAACAGGGACTGCACGTTATGCTAGTTGCAATACTCATCTTGG GATTGAGCAAAGTAGACGGGATGATTTGGAATCACTAGGATATGTACTTTTGTACTTCCTCAGAGGAAGTCTTCCTTGGC AAGGTCTGAAGGCTGCAACAAAGAAGCAGAAGTATGATAAAATATGTCAGAAGAAACTATCAACTCCTATTGAGGTACTA TGCAAATCTCATCCTGTTGAGTTTGCTTCATACTTCCATTACTGCCACTCTTTGACATTTGATCAGCGACCTGATTATGG ATTCTTGAAGCGCCTATTTCGGGACCTATTTGCTCGAGAAGGTTATGACTTTGATTATGTTTTTGATTGGACCATTTTGA AGTATCAGCAATCACAAAAGAATGCAGTGCAGCCCTCCTTATCTCCAGTTCCTGTAGCAAGTAACAGTCGTGGTATTCCA ATGGATGCTGACAACCACCAAGGGCACGTCAAAGAGCGCATTAGATCAGGCAATGCTGCTACTTCTGGTGTTAAAATTCA GTTGAAATCTCCAGTTGGTAGAAATTTGAGTTCTGAAAATCCTCTTGACAAGAATATTTTTGGAGAATCAAATATGCCAT CTACTTCATATTCTGCTGGTGCTTCAAATCGGACCTCCTTGAAACCTGCCTTTTCTGCTGAAGCTTCCAACCCTGGACAA GGGCAAGGCAGTAAAATTGCCCCTTCAAGTAGTTGGATGTCATCTCTGCAGCGCATTTCTTCTGCCAAATAA
Download CDS Sequence

Protein sequence (LotjaGi4g1v0447400.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MERIVGGKYKLGRKIGSGSFGEIYLATHIDTFEIVAVKIENSKTKHPQLLYEAKLYNILQGGSGIPGTRWSGVDGEDNVL VLDLLGPSLEDLFVYCGRKFSLKTVLMLADQMITRIEYAHSKGFLHRDIKPDNFLMGLGRKANQVYIIDFGLAKRYRDSS TNRHIPYRENKNLTGTARYASCNTHLGIEQSRRDDLESLGYVLLYFLRGSLPWQGLKAATKKQKYDKICQKKLSTPIEVL CKSHPVEFASYFHYCHSLTFDQRPDYGFLKRLFRDLFAREGYDFDYVFDWTILKYQQSQKNAVQPSLSPVPVASNSRGIP MDADNHQGHVKERIRSGNAATSGVKIQLKSPVGRNLSSENPLDKNIFGESNMPSTSYSAGASNRTSLKPAFSAEASNPGQ GQGSKIAPSSSWMSSLQRISSAK
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR11909:SF97
1 408 408 2.1E-209 –
PANTHER
PTHR11909
1 408 408 2.1E-209 –
Gene3D
G3DSA:1.10.510.10
1 335 335 2.6E-109 –
SUPERFAMILY
SSF56112
4 290 287 1.31E-83
IPR011009
CDD
cd14125
8 282 275 0.0 –
SMART
SM00220
9 278 270 1.4E-15
IPR000719
ProSiteProfiles
PS50011
9 277 269 28.782
IPR000719
Pfam
PF00069
9 227 219 8.4E-27
IPR000719
ProSitePatterns
PS00107
15 38 24 -
IPR017441
ProSitePatterns
PS00108
124 136 13 -
IPR008271
MobiDBLite
mobidb-lite
304 324 21 - –
MobiDBLite
mobidb-lite
348 423 76 - –
MobiDBLite
mobidb-lite
351 423 73 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi4g1v0447400.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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