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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0012600 |
| Transcript ID | LotjaGi5g1v0012600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sec14p-like phosphatidylinositol transfer family protein; TAIR: AT2G21520.2 Sec14p-like phosphatidylinositol transfer family protein; Swiss-Prot: sp|F4IHJ0|SFH8_ARATH Phosphatidylinositol/phosphatidylcholine transfer protein SFH8; TrEMBL-Plants: tr|I1M895|I1M895_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0012600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2737349..2742147) extracted from Lotus japonicus Gifu genome v1.2.
ATTGTTGATTGTTGATTGTTTTGTTAGGCTTTGAAGGATTCTCTGGTCATCATGATGAGAGGAGGGATCGGAGATCGGAT TATGAAGTCTCTGAGGATGAAAGGCGAACGAGAATTGGAAGCCTGAAGAAGAAAGCGATCAATGCGTCGAGCAAGTTCAG GCATTCGCTTAGGAAGAAGAGTAGTAGGAGGAAGAACGCGAGCCGGAGCAATTCTGTTTCCATTGAGGATATTCGGGATG TCAAGGAGCTTCAAGCGGTGGATGCGTTTCGACAGGCGCTCATGTCGGAGAATTTGTTGCCATCAAAACATGATGACTAT CACATGTTGTTGAGGTTGCTGCCCCCTTGTCCCTCCTTCCCTGTTAATTTAGATGTCTCTTTTATTATCAATGTTGATTG CATCTTTTCGCTTCTAGCTGAAGATTGAATCTGTTAGCATTTGATAGACAAGTTAGAACATGGCAGAGTAGTACATATAG GTTCTGTGAATCTGTTCTATATCTGGTGCAGAGTAGAAACAGAATAGAACACAACTGATATTTAAAAAGTGATACATTTT GGTTCCATACAAGAGTGGAATCATAGAGAAGAGACTATAGCATGTTTTCTATTCTGTTATGTTCTGTCTGAGTGTCGAAG GCTGCCATGAGTCATTGATAGTAGATTAGTTTGAGTCACGGCCTTCATTATTCCAACCTACACATAGAAATCATACAATT TTGAACCATGGCATTTCTGATTTGTGCAGACGGATCTTTGCGTATTCACAATTTACATGCTTCTTAAACTGGACAGATGG CCTGTTCAACTTGAAGCATAATTTAAAACTCAAATTAACTGATGTTGTTGCAGATTCTTGAAAGCGAGGAAATTCGACAT TGAGAAAGCAAAGCAAATGTGGGCCAACATGATCCAATGGAGGAAAGACTATGGTACTGATACAATTATGGAGGTGAGTC ATCTGATTCGAAAAATATATCCAACCTTTTACTACTTTAGTTTTCTTCAATTACTTGTTCATACGATAATACTTTGGTTT CGTCTCTCTTTCAATCTCTAGGATTTTGAGTTCAGTGAGTTGAATGAAGTCCTGCAATACTATCCACATGGTTATCATGG TGTTGATAAGGAAGGGAGACCTGTATATATTGAGAGGCTAGGCAAAGTTGATCCCAATAAGCTTTTGCAAGTAACTACCA TGGAAAGGTATTTGAGATATCATGTACAGGGTTTTGAGAAAACGTTTGCTGTTAAGTTCCCTGCATGTTCTTATGCTGCA AAGAGACACATTGATTCAAGTACAACCATTCTGGATGTTCACGGCGTGGTATGTTGTCTGTGTGAATAGTCTTGAAAATT TCCTTGGCACCACTTTAGTCAATAATTGGTTTACGTTATCATGCTGCCTTATGCTTTGTAGGGTTTCAAAAACCTAACCA AGTCTGCGCGGGAACTCATCATGCGGCTGCAGAAAATTGACGGTGACTATTATCCAGAAGTATGTGGCTTTAATACCGAT GTCGTCCTTGCTTAATATTTTCCAATTGTTCATGGCTTCTGAACTTACTTTTTGTTCTTTTATCTCTTCTAAACTTTAAA TGATTCTGTGCAGACATTATGTCGAATGTTTATAATCAACGCTGGTCCCGGTTTTAAGCTGCTTTGGAACACAGTGAAAT CATTTATTGATCCCAAAACTTCTTCAAAGATAAATGTATGTGTTGATTACTTGAGTTATTCTTTCTATTTGAGATCTTTA TAGGATTTCAATCAAATAATTATCTTACAGTGGACAGAGATAATCTATAGATGTAGTATTAATCGATACTTCAATGTTCC ATTAGGTTCTCGGAAACAAGTTCCAAAATAAATTACTTGAAATTATTGATGTGAGGTAACTATGCATTAATTTTGTTGAT GGTGTTATTTCTGACTCAACATGTATTATTATCTGGAAATTCTTACTTTCTGTATGGTTTTCAGTGAGCTGCCAGAATTT CTAGGTGGTAGTTGTACTTGCACAGATCAAGGTGGTTGCATGAGGTCAGATAAAGGTCCGTGGCAAGATCCAAACATTTT AAAGGTTTGCTGCTTATTGCGTAATTGTTAGACTCCATTTTTCATTAAACATTTACTGGTTATCTTGTGATTGCTTCTGC TATGCATCTGTAACTCAAATAGTTTTGCGTGTGCAGAAAGTTCTTAGTGGTGAAATACAATGTTCTAGACAAATAGTGAC GGTTTCTAATGATGAGGGAACAGTGATTGAGTGTGATAAAGCTTATCCAATGGTATAGTTTTAATATCATCTTAGATGCT TCATAATTTTGAACTTTCAATTTTTATAATTCTGATAATCATTTTTTTTTTCGGGAGTAGACAAGAACCAGTGATACATC AACAGCAGAGTCAGGATCTGAAGTTGAAGATATTACTTCCCCCAAAGCTAGTGTGAATTATACAAACCCTAGATTGACTC CTGTCCATGAAGAAGTAAGTGGTCATGATAATTGATATTGATGTTTCAAATTGAAAGAAATAAAGAGATTGATAGAAAAG TGTTGCAAGAAATCAAATAATACTTATTTGATGTTTGTCCAGGCAAGGTTGGCTGGTAGGGCTAGTCATGCTGGTGGTTT CTCTGTGTATGATGAGTATGTTCCCATGGTTGACAAGACTGTTGATGTTGGGTGGAAGGAAAAGCATTCAACAACTCAAA ACTCATTTGGCTCAACAGGTTGGATAATTAACGCATTTTCTCTGAAGTCAGTAATTTTGATATATTATAAACTTAATTGC ATATTATTTAAGCCTGCAAGAGTGGAACTACATTGTTTCTTTTCTTTTCTTTTTTGTTTGTAAACTCACTGAACCTAACT GCCAATGAAATATTCAAAAATGTTTGTAGTTTTACATAGCATACATACATAATAGCATTAGTAAGCTCACAATTTTGCTT TAAAATATTTTTGTTTCATAATTTTGTCACAGATTTGAATTGATCAATGTGTATTTGTCCATGTCCGAGAAAGCAAACAC GAATTTTTTTAACACATGTAACAGAAAATAAATATTTGTCTATAATGAAAGGATTAAAGATAAGGAATTTATTCATTTAC ATCTAGATACATAAATTGAACATTTTTCACCATTTAAGCTTCGGATTTTACTACCTGGAGTTATGGCATCCAAGTAAAAT ATGTTTGTAATGTATTTGTTCTTGGTTGCAGAAAAATATCTATCGAGGACTGGAAAGTCTGATGGAAACTGTGCATATTT CTGGGCTATTATAGTGGGCTTCTTTGTTGCCATTTTTACTTTTGCTCGTTCAATAGCATTTCGTGTGACCAAAGGAATAC AGGACTCTGAAACTGGCTCTTCCCAAAACCCGCCAAAAATGGCTGTTGATTCAATAGTCAATGAGGAATTTCGTCCCCCA TCTCCTGCTCCCAGATTCACAGAGGCAGAACTCCTTTCGTCTGCTTCGAAACGCCTTTGTGAGCTTGAAGAGAAGGTTGA CATACTAAATTCAAAACCTAATATAATGCCATATGAGAAAGAGGAACTGCTAAATGCTGCTGTTTATCGTGTGGATGCTC TGGAAGCAGAATTGATCGCAACAAAGAAGGTATTTCACTTAAAATCATGTTATTTCTTTCTAGCTAGACAGACTGCAATT CTCTCTGCTTACTCAGTCTCAAATTTTGATGAAAAGGTGTCTATATTTTGCTATTATTTGCCAATTAATTGGCCTGTCCA CCAATTACTTACTCAGCTGTCAATTTTCTGATAGTGGATATACAGTTACATTTTATGTAAGTAGTGAGCTTATTAACATA ATCTCTGATAGGTTCAGGTAATTCAGAATAGTTTATTTATGTAAAATAGGGAATAGGGAGCTCAAGAGCTCTACAAGATG GTAACCTTTCCAGAGTCTATAACTCCTACCAGAGAGGTAATCTCTCCTAACAGAATCCCTTACTCAGAACCAGAATGAAT CCCCTCTCTTCTTCCTCTCCCCAAATACCCCAAATCCCTGAAATCCCGGGATACATGGGACACGTCACTAACTAACTCAC ATTTTCCTCTCCTGACCCTACTCTTCTTTTCCTAGTGTAAACCTTCCATATCCTGGGCCTCTCACTTGATGCTCCTATGA TTGGATCCTCATATCACTTGACTTGCAACCACTATAGATGTAGATAATTTCAATTAATGCCCGACATATTGGTACATTAC TGCTCTGTTTAAACTAATAGCAGGCTTTGTTCCACAGTGAAATACACTAGAACAGTAATTTCTAATTAGAAGCTACAAGT CTTATATACTTTGTTAGGATCAACTTCTGTTTCCTCATAATCAATTCTGACACTCAAGCTACTCACACAAGTTTCTCGCC ATAATTGATTTTGTCTTTAAAATGATTTGTAGAAGAATTTCCAACCATGCACTTATCTTATGAGTAAATATGTCTTGGAT TCTGCAAAATCATGAAACCAAACATGCACTAAGATTAGTTTCAAGCTAAACTGCTCAGTAAATTTGGGTATATATATATT AAAAAGATATTGTATTTCATTTACTTTACAGGCATTGTACGAAGCTTTGATAAGACAAGAAGAGCTTCTGGCGTACATAG ATTGTCAGGAGAGAAGGAAATTTGAGGTAATTCAACTATATTTGCATCTTGTGTGAATTCTAAATTTTAAAATCCAAATG CTTAGAACAATCTTGCTCGGGAACTCATAAAAATATGTCCTACCTATTTGCATAGCAGAAAAAGAAGTTTTGCTGGTGA
CDS sequence (LotjaGi5g1v0012600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCGGAGAATTTGTTGCCATCAAAACATGATGACTATCACATGTTGTTGAGATTCTTGAAAGCGAGGAAATTCGACAT TGAGAAAGCAAAGCAAATGTGGGCCAACATGATCCAATGGAGGAAAGACTATGGTACTGATACAATTATGGAGGATTTTG AGTTCAGTGAGTTGAATGAAGTCCTGCAATACTATCCACATGGTTATCATGGTGTTGATAAGGAAGGGAGACCTGTATAT ATTGAGAGGCTAGGCAAAGTTGATCCCAATAAGCTTTTGCAAGTAACTACCATGGAAAGGTATTTGAGATATCATGTACA GGGTTTTGAGAAAACGTTTGCTGTTAAGTTCCCTGCATGTTCTTATGCTGCAAAGAGACACATTGATTCAAGTACAACCA TTCTGGATGTTCACGGCGTGGGTTTCAAAAACCTAACCAAGTCTGCGCGGGAACTCATCATGCGGCTGCAGAAAATTGAC GGTGACTATTATCCAGAAACATTATGTCGAATGTTTATAATCAACGCTGGTCCCGGTTTTAAGCTGCTTTGGAACACAGT GAAATCATTTATTGATCCCAAAACTTCTTCAAAGATAAATGTTCTCGGAAACAAGTTCCAAAATAAATTACTTGAAATTA TTGATGTGAGTGAGCTGCCAGAATTTCTAGGTGGTAGTTGTACTTGCACAGATCAAGGTGGTTGCATGAGGTCAGATAAA GGTCCGTGGCAAGATCCAAACATTTTAAAGAAAGTTCTTAGTGGTGAAATACAATGTTCTAGACAAATAGTGACGGTTTC TAATGATGAGGGAACAGTGATTGAGTGTGATAAAGCTTATCCAATGACAAGAACCAGTGATACATCAACAGCAGAGTCAG GATCTGAAGTTGAAGATATTACTTCCCCCAAAGCTAGTGTGAATTATACAAACCCTAGATTGACTCCTGTCCATGAAGAA GCAAGGTTGGCTGGTAGGGCTAGTCATGCTGGTGGTTTCTCTGTGTATGATGAGTATGTTCCCATGGTTGACAAGACTGT TGATGTTGGGTGGAAGGAAAAGCATTCAACAACTCAAAACTCATTTGGCTCAACAGAAAAATATCTATCGAGGACTGGAA AGTCTGATGGAAACTGTGCATATTTCTGGGCTATTATAGTGGGCTTCTTTGTTGCCATTTTTACTTTTGCTCGTTCAATA GCATTTCGTGTGACCAAAGGAATACAGGACTCTGAAACTGGCTCTTCCCAAAACCCGCCAAAAATGGCTGTTGATTCAAT AGTCAATGAGGAATTTCGTCCCCCATCTCCTGCTCCCAGATTCACAGAGGCAGAACTCCTTTCGTCTGCTTCGAAACGCC TTTGTGAGCTTGAAGAGAAGGTTGACATACTAAATTCAAAACCTAATATAATGCCATATGAGAAAGAGGAACTGCTAAAT GCTGCTGTTTATCGTGTGGATGCTCTGGAAGCAGAATTGATCGCAACAAAGAAGGCATTGTACGAAGCTTTGATAAGACA AGAAGAGCTTCTGGCGTACATAGATTGTCAGGAGAGAAGGAAATTTGAGAAAAAGAAGTTTTGCTGGTGA
Protein sequence (LotjaGi5g1v0012600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSENLLPSKHDDYHMLLRFLKARKFDIEKAKQMWANMIQWRKDYGTDTIMEDFEFSELNEVLQYYPHGYHGVDKEGRPVY IERLGKVDPNKLLQVTTMERYLRYHVQGFEKTFAVKFPACSYAAKRHIDSSTTILDVHGVGFKNLTKSARELIMRLQKID GDYYPETLCRMFIINAGPGFKLLWNTVKSFIDPKTSSKINVLGNKFQNKLLEIIDVSELPEFLGGSCTCTDQGGCMRSDK GPWQDPNILKKVLSGEIQCSRQIVTVSNDEGTVIECDKAYPMTRTSDTSTAESGSEVEDITSPKASVNYTNPRLTPVHEE ARLAGRASHAGGFSVYDEYVPMVDKTVDVGWKEKHSTTQNSFGSTEKYLSRTGKSDGNCAYFWAIIVGFFVAIFTFARSI AFRVTKGIQDSETGSSQNPPKMAVDSIVNEEFRPPSPAPRFTEAELLSSASKRLCELEEKVDILNSKPNIMPYEKEELLN AAVYRVDALEAELIATKKALYEALIRQEELLAYIDCQERRKFEKKKFCW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 44 | 44 | 1.3E-13 | – | |
| PANTHER | 1 | 526 | 526 | 7.6E-294 | – | |
| PANTHER | 1 | 526 | 526 | 7.6E-294 | – | |
| Phobius | 1 | 379 | 379 | - | – | |
| SUPERFAMILY | 7 | 53 | 47 | 2.88E-16 | ||
| Pfam | 11 | 36 | 26 | 3.3E-7 | ||
| SMART | 12 | 37 | 26 | 2.0E-9 | ||
| PRINTS | 15 | 37 | 23 | 3.7E-5 | – | |
| Gene3D | 45 | 266 | 222 | 3.5E-75 | ||
| SUPERFAMILY | 57 | 249 | 193 | 9.55E-60 | ||
| SMART | 57 | 228 | 172 | 4.6E-53 | ||
| ProSiteProfiles | 57 | 231 | 175 | 26.178 | ||
| CDD | 58 | 225 | 168 | 8.84176E-40 | ||
| Pfam | 60 | 226 | 167 | 2.5E-33 | ||
| PRINTS | 184 | 203 | 20 | 3.7E-5 | – | |
| Phobius | 380 | 401 | 22 | - | – | |
| TMHMM | 380 | 402 | 23 | - | – | |
| Phobius | 402 | 529 | 128 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0012600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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