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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0054300 |
Transcript ID | LotjaGi5g1v0054300.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.1 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A151RT93|A0A151RT93_CAJCA Sister chromatid cohesion protein PDS5 isogeny B-B; Found in the gene: LotjaGi5g1v0054300 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:9241078..9250865) extracted from Lotus japonicus Gifu genome v1.2.
GTAAAAATAAAAATAAATAAAAAACAAACCCTTAAAAAAAATGATATATATATACACACACGTAGTATATTAATTGATTT TGCCGAAAATCAATCTCCCCAAAACACAACACACTCACTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGTTGTTTT TCTGTTGTGAGTTTCTCACTTTCTCTCGCTACTCCGTTTCTCTGTTTCGCAAACGCGAGAAACAGTTGAAAAACCCTAGC TATCGTTTTCGTTTTCTGTGTGTGTTGGTTTGAATCTACTTCAATTGGAGGGGTTTTAGGGTTAGGGTTTCGATGGAGTG AGAGCGCGCAGCAAGATCTACAACGAAGAACCACTCCAAACTCCTCGTCAATGGCTTCCACCGATAAGGAGCTTGAAAAG CAGCTACGAGAAGCTGGTAACAAGCTCGCAAATCCTCCATCCTCCGTCGACGACCTTCTTCGTCTTCTCGATGTAAGCAC TCTCCTCCCTCCATTTCGCGTTTTCACTGTATGTAGCATGTTGTTGTTGAGGGTTTCGTGATTCGATTTTGTGTGAATTG CATGCCGTGGCTGACTTTAGTTTTGCCCTAATTGTCATGTTTTGGAATGGTTTATGCTTTGTACTGAATTGTTGTGATTA ATTTGCAATTAGTAAAAGTCATGAACTGTTTGGATTTTGTTGGTTGTGAAATTGAAAGTAATTTGTGTTTATATCCTCAA TTATGAAGTGTAAGATATTGTGAGTGAGTGAATCAGATCTTTCAAAAATTCAGTTTTGAATGAAATGAATTCTGCTAGTT TTGAGATTTGGATATTAATGAGTATCGGTGTGCTTGCGCGTTGTGTGCTACTTTCACCACTGCTTGTTTCATGAATGAAG TTACTACTGAGGTTTAATTTGTAATAAAAGTATTAAATCTGCAATTTGCTGGCTGGTGTTGGTTCTCATCAACATTAATC GCGCGAATTATTTTGTTTTGCCAACATCTACAGTCTAGGGTTTTTAAACAAATGGTGCTAGAGGAACTGGAAATCGTTTA ACAGAATGATGTTCTTGAGTTCATTCAGAATGATCACGAAACTGAAGATACAGCTGTGTACTGGCTGAGTTTTCTAAGAT GCAACTGAGTTTGTGGTAGAAAATAGGAGAAGCTGAGGAGAATACCGAAGTGTAGGATAACTAGTTATCCTAAGCCAAAA TAAAATAAGGAAATATAAATGATTGGAAATTAGTTGTTTGCTATATATATTTTGTATTATAGTTTTTTAGTAATATAAGG TGTACTTGTCCTGCCAAATTTATCTAGTCACATGCAAAAACGTGGTATGGTTGTATCTGTTAATTATCACTAGATTACAT TTTCTTTGGTGAATATCTATCTAAGATTATATTTGCTTATGTTGCCCTGACTATTGTTGATGTATACTTTGTGAATTAAT TGCTTGATATAAAAGGAAAACAGAATTATATTGTAAAATATGAACCAGTAGTAGCTACTGCATATGATACAGCATGCTAT TCATATCTATTGAAGATTATACTAGTTTTGTTGAAATTAAGTTTTTAATGTTTACATAACTGCCTGTATGCCTCTCACTG AAGTTGTCTGTGGATTCTGTTTCTTCTCAATAGCTAATACTCCTAGGTCTCAGAAGTTGAGTCTGATATTTTTTGACGTG CTCTTCGTATTTACTTTAATTTTTCTGAAGTTGTTGATACTGCATATAATTTTAACAAGTATTGTGAAATGCATTATTTA ACTCTCCTTGTTCATCTAGTCACTCTTTCTTAGTAAAGCATGGGTTTGAATTGTTCAGGAATTCCCCTCTGACATAAGTT AAGATAGTCTGAAGAACGAGTAATAGGTGAACATTGACCAAAATATTAATTACCTGTGCTTGATCTTACTTTCTTTACCC TTGAAACTGCAGCAAGTTGAAAATTGCCTATTGAAGGTAGAACAATCACCTCCCAAGTCTATGCAAGATGCGCTCTCTCC ATCATTGAAGGCATTAATTGATGATAAACTTTTAAGGCATTCAGATATTGATGTCAAAGTTGCAGTTGCCTCGTGCATCA GTGAGATAACAAGAATCACTGCACCTGATGCTCCTTACGATGATGACCAAATGAAGGTACGCGCTATCATTTTCTACTAT AAGTTAATCAATTATCATGTTCTTTACAAATAATATTTGTGAAGCTTTATTGATGTCATTTTCTTCCAGGCGGTCTTCCG GTTAATTGTATCTTCATTTGAAAATCTATATGATGATTCAAGCCGGTCATGTGCAAAAAGGACTTCGATTCTTGACACAG TTGCAAAAGTCAGGTCATGTGTGGTAATGCTGGATCTTGAATGTGATGCCCTAATTTCAGAGATGTTTCAGCATTTCTTC AAGACAATAAGGTAAATGCTATGAATACAAGTTCAGCATAATAATAGCTTCTGATTCCTTTTTATTGCATTCCTCTAGCT TCGTATTATATTTAGCAATATATTCCAAAGGAAGTACATTAAGTGGGTATCTACTTTAGGTGTAAAATATTTTCAGTATT ATAATGCATCTATTGAGAAATGTACTTTTGATTGAGTGTGACAGTATTACTGCTTCTAGATAAAGATCTTGGTGTTTCTC ACATGGTTTTGCCTTTATTTATTTTGATGCAACCTGATATGGGTTTTTATTGCACTAAGGCAGTGTTTGAAAGAGCTTGT CTGGATCTTATTGTAGTTTTTTTTAAATGATATAAACATGTAAGCTGTTGTTGGTTAAGCACTTAAGCTTATAAAAATAA CTTGTGACCTATCTATAAGCTCTTTTGAGCTTATTTTAACAAGCTAACGAAAATCAGCTTATATTAAGTTTCTGGCATAG GCTCTCATGTGATAAGCACTCACTTAATAAGCATTTAACTACCTTATTTACCCAAACGTGTTCGTAGTTATTGCATTCTT TATCTGGGGAAACTTATAAAATATAAGAGGCTGGTAATTTATTGTAACGTTAATTAAGCATTTGTTTCTATGACATAGTT TTTTATACTAGTTGGTTAAATTAAATGATGTGATTTTGTTCATCGTTTGAAGCTAATATTAAATAATTTTTGGTGTAAAA AGTTAATATTAAATTTAAGTGGCATTTGTAATTCTAGTGTTTCTTTGTATTTATGATTTGATTTATCTTTTCCTTTTTCC ACCCTTTTTTATCTTAATACCTTGTATATGGGTGTTGGTTCAAGTGTTTATTTGCTTCCATATTTTTGTTACATATAGAC ATGCATTTTTTTTTATTTCTTCAGGCAGCTGGAAGCAATGTGTGTGCAAACACAGTTCTAACTAGCAATGTTTGAAAATT TCAGGGAGCATCATTCGGGGAGTGTTTTTGCATCCATGGAAACCATAATGAACCTTGTTCTAGAGGAAAGTGAAGATATA TCGTTGGACTTGCTCTGTCCAATCATAGACAGTGTAAAGAAAGACAATGAGGTTGGAGTTTGAAGATTTGATTTGATTCT TTATTTAAGTAGATTGTGATTTGAAGTTAAAGCATATTTTCCTTGCTCATTTCTTCTGGTCATCATGATTCAGGAAGTTT TGCCAATTGCTCGAAGGTTGGGGGAGAAAGTTCTTGAAAGTTCTGCAACCAGACTTAAACCCTATTTAGTGCAAGCAGTT GATGCCTTGGGTCTTTCTTTGGATGATTATGATGATGTTCTTGCCTCAATATGCCAAGATACATCTGGTAACCTGGACCA AAATGATGTATGTGCTACTAGTGATAATGTGGTTAATTTTCTTGCTTTCATTTTTATGAATATTTGATTGGTATATAATT ATTTCTTGATGAGATAACTTATACTTTCCATACATTTTGTTTTCTATTTATTTGTTCTGTTTTTTTCCACCAGCTTTGAC ACTTGGAACATGTCAACTTTTCTTGGTCAGGTTACAGAGAATTCAAAAGAAGCTGAACAACCTCAACAAGATGATCCTGT TGGTGACAGGTCTCCTAAGTCAGTCATGAGTAATGGCATTGCACAGGCTGGAGAAGATGATGCTTTGGTAGATTCCAAGT CCCTATTGAAGCCAGATGATACTGATTATTCTGTTCAGTCCAAAGGTGATAATTTATCAGGTAATGAGAAGCCCAATGAT TTGAACCCTGAAAATGTTGAGAGCAATGAACTAAAGCCAGTTCAACCAACGAAGAAGAGGGGAAGGAAACCTAGCACTTC AAAAATGGCAGAGCCTTCTGAGGGTTCATATCTTGCTGATGAGAAAGATGCTGAGAAAAAAATTGACTCCAAAAGTCATA GCAAGGATGTTCCTAGTTCTCATAAGGGTGATTGTGCTGAGGCTGCAGGACCTTCAAAGAATAACAAAGAGGTTAATGCC AAGATTTCATCACCTAAAGCAGGTGATGGTGAATCTGATGCTGTTGCTTCTCCTTCACCAAGTGAGAGGACCCATGATGA TGAAAGCCGTTCAAAGAAACGTGGACGCACGAAAAAGAAAGATAGCTCGGCAAAAGAAGTGGCTGCGGAAGATGTTTCGC AAAAGGTGTCTGAAGGAACATGTGATTCAGAAGCAAAACCAACTAGGCCATCAGCAAAAAAGGGACTTGGACGTGGCTCT GATGTCAAAATAACTACTGTCGTAGATGCAGTAAAAAAAGGTAGTGGGTCAAATGATTTAGATGTGAAAAAACAATCTGC TAAAAAAACAGAAGAAAGAAACAAGGGTAGTGGTGGGTCATCCTTGAGGCTGTCAGAGGACAAGAAACGGAGTGGACGGG GGAAAGGTAACCCTGAAAAAGCTCTTGCAAAATCTTCCGCTAAAGATGAGGATGAGGTACTTCTGGGTTCTATTATTTAT TCATCTTATTGCAGCATCATATTGTTTTCCTTTTTATTTTGTTCAAAAAATAATGATTAAATAGCTTTTGTAAATTATTT AGGAAATGGTGTCTTTGCAAAAGTCAGCTATGAAATCAACCAAAGAACATTTGGAGGAGACACCTAAGACAAATTTGAAG AGGAAACGTACTCCAGGAAAAGAAAATGTATGGGTCCTGCTCGGTAATTTTAAAATTATGAAAATTAAATCTTATGGGAC TTGTCCTTTAGGAAAATCCTGTCTTCAGCTATATAGTTTCTGTGCTGGAATTTTTCAGTATAGGCAATTTTGTTATGATA ATTTTTTAAATGCGCTACCAATGTTGTGAGATGTTACCAATCTATGTTCTTATATAGGAGTGTAGGAAGTAATTCTATGC AAGTTTATATGGGCATACTCCTTTTGATAGTCTGCATTGTGATGCACTTTCAAAACATACGCAGTTCTGGCCTTTCTTGC TTATTGCAGAGTTTTACATTTCTTATCACGCTGATTGCGAATTTTCTGGTTGTTGTCTCAGGAATCTGATAACAAGAAAT ATGGTGACGAGCTTGTTGGAACCCGTGTTAAGGTTTGGTGGCCAGAGGATAAAGAGTAAGAACACTTCGTTGCAATTTGT ACTTTTTCCATACTTGGTTGCTGAAACTGTTTGTTTACTTGGTATACATGGTTGCATGTTCTTTACAATTGTGGTGCTAT CCTGTGGAGTGGTGCAGAGTGACTATTATTCTCACATATTAAAATCTGACTTCCTCACACCGTATTGCGGACATTATTAT CTTTCTAGGGGGAAATTCTTTTCTCGTGACCCCTTGCATCCTGGGTTTATTTCTAGGGTGAACATCATGTTCTTTCTGAA CATATCCTTCGCACTTTGACAGATAGTTGACACAAACCAATCAGAGTTTGTACAATCCTAGAGTTGTCTGTCCTTGCATG GCCCACCAATTTTCGCAGATTCCCAGTAGTCCTCCCCTATTTTACTTTCGGCTTTACTCACTGTTTGAACTGGCAATTGA ATCAGAGATAGTGAAGAAAATTGGTACTGAAACACAATCGAGAACCCTAAGATACTGAATCCCAAAGTATTACTGAAATT CAAGAAGAACAGAGATGAATAAAGGAAAATCCCAACTGAATCAACCAACAGATCCAATTCCCAATTCAGTTATTTCCCCC AATGTGGTTCATTGTAACCACTAACTAAATAGTAGTTAGTGGTTAACCTAAACCCTAAACTAACCATGCTCTGACTCAGA TGTCCCCCTAACTCCACATGAGACCAAATGTGAGGTCCTCCTAACTACACATGAGATCAAATGTGATGCCACAGGATATT GGCAGCTTTTCACTCTTTACTTCTAATTAGTCCCTTATTCCTTCTTACATAGACCTTTTTCACCACAGGCTTAACCTATC CCTGTCTCTAACACTCAGCAACCTGCATCTGTCTTTTTTGCACTGCACTTAATTGGGAAGTTCCCCAGAGGCCAGAGCCA GAGCAGCCTGCATGTCTTTGGCACAGCTGCTTGTCCTGCTTCTGGCGAGGCACTTCCTTTTTCTAAGCCTCTATTCAGAA ATTTTGTGCTAAGGCCACCTGTATTATGCCTTGGATTTATGATTTGGCAATTTAGCTGTGGATTTTGGGCATTAATAATT GATGTCTTAAGTTTTGAGTTCTGTATATGTTTGAGCACAAGTTTGCTTATGAGAAATTATCAGCTTTGTATCTTCTATTT TCAATGCAACAGTTGCTTGCTTCATGATGTGCTATACAGTATTAGTGTTTATAAGTTTAACTGCCTCTATCTTCAATTAA CTACTATGCTATGTACTCAGTTTGCTGAACCTTTTTGGTTAAGTTCTCTTGTTTTAATGGTTTGAACTCTAGATTTTGTG CTAATTTTGTCCCGTGCTTTAACGGTTTGTATAAGCTGTTAGGTTGTGTTATTTTAGCTGTACCAATGTTCCATAATGCA AACTGTAACTATGTTGCTTATGATAAGATCCTAAGATTTGCTATAAAAAGCTTTCTTATGAAATGTTGGACTTGGGAGAG AGATATATTTGAATTGGAAAATGGAACTAATGCTTTTTTGTTGCTTTTAACACTATCATATGTATATTCCATTTTGGCAG TTCACTTCTTTTTTCTATTGAAATAGAATATCTATATTTGTTGACACAAATCTCTTACAGGTTTTATGAAGGTATTGTCG ATTCTTTTGATTCTTCCAGTAAGAAGCACAAGGTGATTTACAATCTGTGCTATAATCTAACTACACTGCAACTCCTTTTC CCCTCCCCCTTCCCAATAACCTGTATATTTTAACTTTTGTGTGTATAGATTAATTGAATACTGAATCTGGCATTTTTTTG CATATGTAGCAAACTCAGGACTACTTAATTCCTTACTGACATTTTTTTAAATTGTCAAATTGGCTCATTACTAGTATTTT TATTCTCTTCTGACTGCTCTTGCTATTTTAGGTCTTGTATGATGATGGTGATCAGGAAACATTAAATCTTAAAAAGGAAA AATGGAGTATTATTCAAGATGATGCTGATTCAGATGAGGTGGGCCTCTCTTTCTTGAACATGTTCTATTAAAATTTTCTT CATCTTAATTGAAGATATTTATTTCTGTTTACAGGAAGAAGCAAGAGGTGGTACCAGTCATGATGATGCTTCCGCTGATA TGTATGTTTTTCTCGTGGATGATGTTTATTAATTATTATAAATGTCCTTTTTGTTACATTGTTTGAAGAATATCCTTTGT GTTGTAGCAGGTGTCCAATTTCTGCTTGGTGTGTTATGTTTTTTGTGCCACTTTTACGTTACTGGTCTCATACATCCTTT TTGGTGGAATGATACCCTAAAAGTATCTAGAGATATATTTTCCCTATGCTGATTTGCTCATGCCTTATGATTTATCCTGG GGCAATGTTCTGAAATATTTTGAAGTTGGTTTCATTTTGTCATTCCTGATGGTTATTGCTGTGCTGTATATTTTGATGTT GCAGCCAATTTGTGTGTGTATTATAAAGCAATTTAAAAACATGATAATATAAGTATTGCTGGGTACTTTCAGGTGGATGT GATGATAAATTGCAATAAGTGCTAAGAATTCATTGAATTAATATGCCAGAAATATTCTACATTGGAGGGTAGACATTGCT GTAGATTTTTTGCATCCTGTTAAAAGATTCAATTGGATATAACCTATTTGTTACTGTATTTTGTAGATTGTGCTTTTTAG CTGAGCTTGTCGTCAGTTTTTAGGTTTTCCCTCTTATACATCCTCATTTTCCTATGATTATATTCAGGCCACCCACAAAG AAAGGGAAGACAAGTGCTGGTGAAACCAAAAAGGAAGGAAAGAGGGATTCTGCTTCTAAAAGGTATGTAAATGCTGTTAT GAATTGATGTCAAATGTCATCTCCATTCTTCTTTTGATGTCTCAATTTTTTACTTCCAGTAGCGGAGGAGCCACATCAAG TAAATCAAAAGGGGCATCCATGAAGTCTAGCCATAAGTCAAAGCCGGTTGGCAAATCTGAGGATGAAGTGGGTAGAAAAT CTAAGGATAATTCTCTGAAGAGATGTGATGAATCTATTGATGCTGCACAAAAAAGCAAATCCAAGAACACCGACAGTTCC AAGATAAGCAGATCAAAAGATGACGTTAGCACACCAAAATCTGCCAAGTCTAAGCATGAAACTCCGAAGACTGGAAAATC AAAGCAAGAAACATCTAAGATTGCTGCTGCTTCCAAGGCAAAATCTCCCAAAAGTGGCAAGTCTAATACCAATGGCCCTG GGAAGGTGAAATCTGTTTCGTTGAAGTCTACAGATTCAGAGGATGAGACCTCAGATGATTCAACCAGAGAGGTAGAAGAC ACAAAGGGTAAGACATCAACTTCATCGAAGGTTGGGAGTGAGGTCAAAAGTGGAAAGAAGCGTGGAAGAAACTAGAGATG GTGTGTCCTTTAGCTGCTTTCTCGTTTTCTGCTTATCAGTATTTGAACATTCCTTTCCTCAGTCGGGTCCCTCTATTTAA CCGTTTGTGGTAACCTCCTAATTATTGGTGGCATTTTTATCTGTAGTTATGCTAGTTTAGCTGTCCTAGGAGTTAAGTAT CTAGCGTTCTTTTTGCCCACTTTCTAGGTGGATTTCATCTTAAGGTGGCAAAAGAAAACATTTGGTTTAACACAGCCTTG ATGAGAGATTGTTTTGGCACATACTGATAATGGCTGGTTGGCAATTTAGTACCTATTTATTTTGTATCTGAAAGGTATGC TGCACAGTATGACTGTTAAAGCGTTGGGGGAACCAGCAGTAAGACTGCACTCTTTCGTACCTATTTGTTTGATTCACTGG TTTTGAAATGCTTTTCTGAGTCAATTTAGTCACTATTCATAGTACTATGTTGGTATTTAGTTAAGTTTAAGATTTTTTTC ATTTAATTTGTTGAGTTCTTTTTTATTTTCTGGAAAAGAAGCCTTATCTTTATTAACTAATGCAAGATGAAATGTGTGCA CACTTTGCATGGGATTGGGGATTGTTATCAGCACTCTTTATAACACTTTTCAACACTCTTATTTGCTGAATCCCAATTTG GGTAGAGCTACATAGATTTCAATCAATCAAAAAGTATTGGTAGCATTTCTTTGCATATGAAGTATAAAATGTGAAGCTTT TTTTTTAGAACTAGCAGCAGTCAGCACTTCTGCAAACGCCAAAGTTATAATTAGGATTATTGTTGAGGAAACAGCTAAAT GATGCGTTTACGATCAATTGGACAGTGTATGCTTGTCGTTACAAATAATGAGTTTTTGTTTCATTAGGAATTAGCATTCA GCGGTATCCTGAATATTTTGTAAGGGGC
CDS sequence (LotjaGi5g1v0054300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCACCGATAAGGAGCTTGAAAAGCAGCTACGAGAAGCTGGTAACAAGCTCGCAAATCCTCCATCCTCCGTCGA CGACCTTCTTCGTCTTCTCGATCAAGTTGAAAATTGCCTATTGAAGGTAGAACAATCACCTCCCAAGTCTATGCAAGATG CGCTCTCTCCATCATTGAAGGCATTAATTGATGATAAACTTTTAAGGCATTCAGATATTGATGTCAAAGTTGCAGTTGCC TCGTGCATCAGTGAGATAACAAGAATCACTGCACCTGATGCTCCTTACGATGATGACCAAATGAAGGCGGTCTTCCGGTT AATTGTATCTTCATTTGAAAATCTATATGATGATTCAAGCCGGTCATGTGCAAAAAGGACTTCGATTCTTGACACAGTTG CAAAAGTCAGGTCATGTGTGGTAATGCTGGATCTTGAATGTGATGCCCTAATTTCAGAGATGTTTCAGCATTTCTTCAAG ACAATAAGGGAGCATCATTCGGGGAGTGTTTTTGCATCCATGGAAACCATAATGAACCTTGTTCTAGAGGAAAGTGAAGA TATATCGTTGGACTTGCTCTGTCCAATCATAGACAGTGTAAAGAAAGACAATGAGGAAGTTTTGCCAATTGCTCGAAGGT TGGGGGAGAAAGTTCTTGAAAGTTCTGCAACCAGACTTAAACCCTATTTAGTGCAAGCAGTTGATGCCTTGGGTCTTTCT TTGGATGATTATGATGATGTTCTTGCCTCAATATGCCAAGATACATCTGGTAACCTGGACCAAAATGATGTTACAGAGAA TTCAAAAGAAGCTGAACAACCTCAACAAGATGATCCTGTTGGTGACAGGTCTCCTAAGTCAGTCATGAGTAATGGCATTG CACAGGCTGGAGAAGATGATGCTTTGGTAGATTCCAAGTCCCTATTGAAGCCAGATGATACTGATTATTCTGTTCAGTCC AAAGGTGATAATTTATCAGGTAATGAGAAGCCCAATGATTTGAACCCTGAAAATGTTGAGAGCAATGAACTAAAGCCAGT TCAACCAACGAAGAAGAGGGGAAGGAAACCTAGCACTTCAAAAATGGCAGAGCCTTCTGAGGGTTCATATCTTGCTGATG AGAAAGATGCTGAGAAAAAAATTGACTCCAAAAGTCATAGCAAGGATGTTCCTAGTTCTCATAAGGGTGATTGTGCTGAG GCTGCAGGACCTTCAAAGAATAACAAAGAGGTTAATGCCAAGATTTCATCACCTAAAGCAGGTGATGGTGAATCTGATGC TGTTGCTTCTCCTTCACCAAGTGAGAGGACCCATGATGATGAAAGCCGTTCAAAGAAACGTGGACGCACGAAAAAGAAAG ATAGCTCGGCAAAAGAAGTGGCTGCGGAAGATGTTTCGCAAAAGGTGTCTGAAGGAACATGTGATTCAGAAGCAAAACCA ACTAGGCCATCAGCAAAAAAGGGACTTGGACGTGGCTCTGATGTCAAAATAACTACTGTCGTAGATGCAGTAAAAAAAGG TAGTGGGTCAAATGATTTAGATGTGAAAAAACAATCTGCTAAAAAAACAGAAGAAAGAAACAAGGGTAGTGGTGGGTCAT CCTTGAGGCTGTCAGAGGACAAGAAACGGAGTGGACGGGGGAAAGGTAACCCTGAAAAAGCTCTTGCAAAATCTTCCGCT AAAGATGAGGATGAGGAAATGGTGTCTTTGCAAAAGTCAGCTATGAAATCAACCAAAGAACATTTGGAGGAGACACCTAA GACAAATTTGAAGAGGAAACGTACTCCAGGAAAAGAAAATGAATCTGATAACAAGAAATATGGTGACGAGCTTGTTGGAA CCCGTGTTAAGGTTTGGTGGCCAGAGGATAAAGAGTTTTATGAAGGTATTGTCGATTCTTTTGATTCTTCCAGTAAGAAG CACAAGGTCTTGTATGATGATGGTGATCAGGAAACATTAAATCTTAAAAAGGAAAAATGGAGTATTATTCAAGATGATGC TGATTCAGATGAGGAAGAAGCAAGAGGTGGTACCAGTCATGATGATGCTTCCGCTGATATGCCACCCACAAAGAAAGGGA AGACAAGTGCTGGTGAAACCAAAAAGGAAGGAAAGAGGGATTCTGCTTCTAAAAGTAGCGGAGGAGCCACATCAAGTAAA TCAAAAGGGGCATCCATGAAGTCTAGCCATAAGTCAAAGCCGGTTGGCAAATCTGAGGATGAAGTGGGTAGAAAATCTAA GGATAATTCTCTGAAGAGATGTGATGAATCTATTGATGCTGCACAAAAAAGCAAATCCAAGAACACCGACAGTTCCAAGA TAAGCAGATCAAAAGATGACGTTAGCACACCAAAATCTGCCAAGTCTAAGCATGAAACTCCGAAGACTGGAAAATCAAAG CAAGAAACATCTAAGATTGCTGCTGCTTCCAAGGCAAAATCTCCCAAAAGTGGCAAGTCTAATACCAATGGCCCTGGGAA GGTGAAATCTGTTTCGTTGAAGTCTACAGATTCAGAGGATGAGACCTCAGATGATTCAACCAGAGAGGTAGAAGACACAA AGGGTAAGACATCAACTTCATCGAAGGTTGGGAGTGAGGTCAAAAGTGGAAAGAAGCGTGGAAGAAACTAG
Protein sequence (LotjaGi5g1v0054300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASTDKELEKQLREAGNKLANPPSSVDDLLRLLDQVENCLLKVEQSPPKSMQDALSPSLKALIDDKLLRHSDIDVKVAVA SCISEITRITAPDAPYDDDQMKAVFRLIVSSFENLYDDSSRSCAKRTSILDTVAKVRSCVVMLDLECDALISEMFQHFFK TIREHHSGSVFASMETIMNLVLEESEDISLDLLCPIIDSVKKDNEEVLPIARRLGEKVLESSATRLKPYLVQAVDALGLS LDDYDDVLASICQDTSGNLDQNDVTENSKEAEQPQQDDPVGDRSPKSVMSNGIAQAGEDDALVDSKSLLKPDDTDYSVQS KGDNLSGNEKPNDLNPENVESNELKPVQPTKKRGRKPSTSKMAEPSEGSYLADEKDAEKKIDSKSHSKDVPSSHKGDCAE AAGPSKNNKEVNAKISSPKAGDGESDAVASPSPSERTHDDESRSKKRGRTKKKDSSAKEVAAEDVSQKVSEGTCDSEAKP TRPSAKKGLGRGSDVKITTVVDAVKKGSGSNDLDVKKQSAKKTEERNKGSGGSSLRLSEDKKRSGRGKGNPEKALAKSSA KDEDEEMVSLQKSAMKSTKEHLEETPKTNLKRKRTPGKENESDNKKYGDELVGTRVKVWWPEDKEFYEGIVDSFDSSSKK HKVLYDDGDQETLNLKKEKWSIIQDDADSDEEEARGGTSHDDASADMPPTKKGKTSAGETKKEGKRDSASKSSGGATSSK SKGASMKSSHKSKPVGKSEDEVGRKSKDNSLKRCDESIDAAQKSKSKNTDSSKISRSKDDVSTPKSAKSKHETPKTGKSK QETSKIAAASKAKSPKSGKSNTNGPGKVKSVSLKSTDSEDETSDDSTREVEDTKGKTSTSSKVGSEVKSGKKRGRN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
MobiDBLite | 1 | 24 | 24 | - | – | |
PANTHER | 5 | 780 | 776 | 2.8E-209 | ||
PANTHER | 5 | 780 | 776 | 2.8E-209 | – | |
SUPERFAMILY | 39 | 262 | 224 | 2.02E-8 | ||
MobiDBLite | 255 | 609 | 355 | - | – | |
MobiDBLite | 265 | 279 | 15 | - | – | |
MobiDBLite | 312 | 345 | 34 | - | – | |
MobiDBLite | 368 | 395 | 28 | - | – | |
MobiDBLite | 433 | 465 | 33 | - | – | |
MobiDBLite | 509 | 609 | 101 | - | – | |
Gene3D | 608 | 657 | 50 | 3.8E-10 | – | |
SMART | 608 | 667 | 60 | 6.0E-6 | ||
SUPERFAMILY | 610 | 652 | 43 | 5.19E-8 | – | |
CDD | 613 | 657 | 45 | 1.02049E-4 | – | |
MobiDBLite | 636 | 664 | 29 | - | – | |
MobiDBLite | 636 | 876 | 241 | - | – | |
MobiDBLite | 673 | 688 | 16 | - | – | |
MobiDBLite | 695 | 709 | 15 | - | – | |
MobiDBLite | 710 | 725 | 16 | - | – | |
MobiDBLite | 732 | 763 | 32 | - | – | |
MobiDBLite | 769 | 799 | 31 | - | – | |
MobiDBLite | 800 | 832 | 33 | - | – | |
MobiDBLite | 833 | 856 | 24 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Mitotic sister chromatid cohesion | The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission. |
Expression pattern of LotjaGi5g1v0054300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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