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IPR039776 is a Sister chromatid cohesion protein Pds5.
<p>This entry includes sister chromatid cohesion protein Pds5 and its homologues. In budding yeasts, Pds5 is required for both sister chromatid cohesion and condensation [[cite:PUB00090089]]. It forms the Pds5-Wapl complex that unloads cohesin from chromosomes [[cite:PUB00090090]].</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Mitotic sister chromatid cohesion | The cell cycle process in which the sister chromatids of a replicated chromosome are joined along the entire length of the chromosome, from their formation in S phase through metaphase during a mitotic cell cycle. This cohesion cycle is critical for high fidelity chromosome transmission. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.1 transcriptional regulator; Swiss-Prot: sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5; TrEMBL-Plants: tr|I3S8P0|I3S8P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0099300 | 5 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.1 transcriptional regulator; Swiss-Prot: sp|Q04264|PDS5_YEAST Sister chromatid cohesion protein PDS5; TrEMBL-Plants: tr|I3S8P0|I3S8P0_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0099300 | 5 | ||
| – | Sister chromatid cohesion PDS5-like protein; TAIR: AT1G77600.2 ARM repeat superfamily protein; Swiss-Prot: sp|A4L9P7|PDS5A_RAT Sister chromatid cohesion protein PDS5 homolog A; TrEMBL-Plants: tr|K7LX49|K7LX49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0160100 | 10 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.2 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A0B2R5L9|A0A0B2R5L9_GLYSO Sister chromatid cohesion protein PDS5 like B-B; Found in the gene: LotjaGi1g1v0378300_LC | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.2 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A0B2R5L9|A0A0B2R5L9_GLYSO Sister chromatid cohesion protein PDS5 like B-B; Found in the gene: LotjaGi1g1v0378300_LC | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.2 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A0B2R5L9|A0A0B2R5L9_GLYSO Sister chromatid cohesion protein PDS5 like B-B; Found in the gene: LotjaGi1g1v0378300_LC | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.2 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A0B2R5L9|A0A0B2R5L9_GLYSO Sister chromatid cohesion protein PDS5 like B-B; Found in the gene: LotjaGi1g1v0378300_LC | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B; TAIR: AT5G47690.1 binding protein; Swiss-Prot: sp|O43312|MTSS1_HUMAN Metastasis suppressor protein 1; TrEMBL-Plants: tr|A2Q1R4|A2Q1R4_MEDTR HEAT; Found in the gene: LotjaGi1g1v0438100_LC | 3 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT1G15940.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A; TrEMBL-Plants: tr|K7L820|K7L820_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0350400 | 8 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT1G15940.1 Tudor/PWWP/MBT superfamily protein; Swiss-Prot: sp|Q6A026|PDS5A_MOUSE Sister chromatid cohesion protein PDS5 homolog A; TrEMBL-Plants: tr|K7L820|K7L820_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0350600 | 8 | ||
| – | Sister chromatid cohesion protein PDS5 like B; TAIR: AT5G47690.3 binding protein; Swiss-Prot: sp|Q9NTI5|PDS5B_HUMAN Sister chromatid cohesion protein PDS5 homolog B; TrEMBL-Plants: tr|K7MJA4|K7MJA4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0005800 | 10 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.2 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A151RT93|A0A151RT93_CAJCA Sister chromatid cohesion protein PDS5 isogeny B-B; Found in the gene: LotjaGi5g1v0054300 | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B-B; TAIR: AT4G31880.1 transcriptional regulator; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|A0A151RT93|A0A151RT93_CAJCA Sister chromatid cohesion protein PDS5 isogeny B-B; Found in the gene: LotjaGi5g1v0054300 | 11 | ||
| – | Sister chromatid cohesion protein PDS5 like B; TAIR: AT5G47690.1 binding protein; Swiss-Prot: sp|Q5U241|PD5BB_XENLA Sister chromatid cohesion protein PDS5 homolog B-B; TrEMBL-Plants: tr|K7MAX3|K7MAX3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0282400 | 11 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| mobidb-lite | MobiDBLite | 1 | 7.14 |