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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0071300 |
| Transcript ID | LotjaGi5g1v0071300.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lung seven transmembrane receptor, putative; TAIR: AT5G18520.1 Lung seven transmembrane receptor family protein; Swiss-Prot: sp|Q8BUV8|GP107_MOUSE Protein GPR107; TrEMBL-Plants: tr|V7BF79|V7BF79_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0071300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:11810008..11816129) extracted from Lotus japonicus Gifu genome v1.2.
CGCATTCGCACAATCGCGCAACTAAGCCAAAATTAAAAGTAAAAAAATGGAAAAAGCAATGCCGTTCTCCTAATTATTTT CGCTTCATTTGTATATAACTCCGCCTAGAGCTAGAGATCACAACTCACGAGCTACGACGTCGTTTTAAAATTCCAAATTC TTCAAAATCGCAATCATCTTTGTATCGTCTTCTACAGATCCCTGATTCACTTCGAAATCCTTCCACCGTCGACGATGGCC AAAACGGCATCCGCCGCCGCCGTCTTCCTCCTCCTCCTCCTCTTCCTCGCCACCCCCTCCACGGCGGAGATCAAGTCCCT CACCATAACCTCCGACACCCGCCCCATGATCCTCTTCGAGCAATTCGGATTCACACACACCGGCCACGTCTCCATCGCCG TCTCGGAGGTCTCGGTGGCGGCCTCCGCCTCCGCCTCCCAACCCGACCCCTCCCGCCTAGGGTTCTTCCTCCTCAGCGAG GAGTCGCTCATCCAAGTCGCGATTGAGATCCAGCAAAACCCTTCCTTCTGCGTCCTCGATTCACACTACATCACCCACCT CTTCACCTTCCGCGACCTCTCGCCGCCGCCATCGGCGTCGTTCAACCGCTCCTACCCCGTCACCTTCCCCAACGAGTTCA GCCTCTTCTTCGCCAATTGCGCTCCGGACACCTCCGTCTCCATGGCCGTCCGCACCGAGCTTTACAACCTCGACAATGAC GGCTCCCGCGACTACCTCTCCGCCGGGGTAACCCGCCTGCCTACACTCTTCTCCGTGTTCTCCCTCGCCTACCTCGCCTT CTTCGCTATCTGGGTCTACATCTGCTACACCAACCGCCGCTCCTTCCACCGCATCCACCTCCTCATGGCCGCGCTCCTCC TCATGAAGGCACTCAATCTCATCTGCGCCGCGGAGGACAAGCACTATGTGAAAGTCACCGGCACCCCTCACGGCTGGGAC GTCCTCTTCTACATCTTCCAGCTCATCCGCGTCGTGCTTCTCTTCACCGTCATTGTCCTCATCGGCACCGGCTGGTCCTT CCTCAAGCCATTCCTTCAGGAGAAGGAGAAGAAGGTCCTCATGGTTGTCATCCCCCTGCAGGTTCTCGCCAATCTCGCCT CCGTCGTCATTGGCGAGACTGGACCCTTCATCAAGGATTGGGTCACCTGGAACCAGGTTTTCCTTCTGGTTGATGTCATT TGTTGCTGTGCTATCATCTTCCCCATTGTTTGGTCCATTAGGTCCCTCAGGGAAACTTCCAAGACTGATGGCAAAGCTGC TAGGAACTTGGCCAAGTTAACCCTCTTCAGGCAATTCTATATTGTTGTCATTGGCTACTTGTATTTCACTCGCATTATTG TCTTTGCCCTCAAAACTATCACGGCTTATAAGTACCGGTGGGTCAGTAATTTCGCCGAGGAGGCTGCTAGTCTTGCCTTT TATGTTGTCATGTTCTACATGTTTCAACCGGTGGAGAAGAATGAGTATTTCGTGCTCGACGAGGAGGAAGAAGAGGCGGC AGAGCTCGCGCTCAGGGAAGAAGAATTTGAGCTTTGAAAGAATTTCAGCTCACCCTCTTTGTCAACCACAGGTATCAGAT TCTCCCATGACTTAAAAATTGCTACTGCTTTTGTGGATCAGCTGTTCAAGTTTGCCGCCAGTGCATTATCATTCTATTAT ACATGACTATACTTTGTTTTCTAGTTTTTGTTTGCAATGTTGATAATGTATTGTGAGGAATTGAAGAAAAAGTTTACTTG AGAAGCTGTATGCTCAGTTGCTGCTCAGTTATTTTGGTACTGATCATTGTTCTTTGAATTTCAATTTTACATATTCACGC TCTTCTTGATTGTATAGTAAGGATGAACACTACACAATGACTTGATTTCACACTACAAACCTTTAATTTGTTGAGGGGAG AGTTATATTTAGAGCTAGTGAAGTCTGTAATTTAATAGAGTACCTTTTGAATAACTTGCCAAGATCTTTGCTCAAACTCC AAGTACCTTAGAGACGTGTATTCTTATTTCCTTCTTTTCCTTAACATTCTATTCTACTGTTTGAGACATGACTATACTGG AGTAACTGGACTACTGCCTATATTCTAGTCTGTTTTTTTTTTTGCAGTTGTAGTTATTAATCATAGCCACCTAACTATTC GTATGTTAAATTGTGTGTGTCTTGTTCCCTGTTTACACCTGGTCATTTTTCTGAAAGATCTGCTATAAGTGCTGATGTTT TTAGCAGTTGAAATACAATTTGGGCAGATGCATACAAAATGGATGGTTTGTGAAGAGTTCCCTCCCTCTTGAAACCTCAA TTTGATCAAGTTGCTTTAAGTGTTTTGCCTCTCATCATCAACTTTCCTACACTCTTTTTGGCATCTTAAATTTATCTTCA ACAGTATGAAACTATGAATTGCATGCCCATAGAGTGATCCTTTTCTGTTTGCACTTTCTCAGCCTTAAATGCGTGAATGG AGAGAAGTGAAGCAACTAGCTGTCGCTTATGATGTAATGTGGGTAGGAGTTCGTCAGCCTTAGACGCTCAAATCTAGAAT TTAGCTTTTGTTTCGAAACACAAGCTAAATTCTAGAAGTTAATTGATGCAACCCACCAGTATATGGTTTTTGAAAGCATG CAATACACTTTATAGTTATACGCGATGGTAGTACACATGATTACTCTAAGTATGAAAACCCGTGTGGACTATTTCATGCA TCTATATTCTTTTGGTTTTAAAGTCAACGTATGTTATTGCCATCATTTAACTGCCATGATGATTTTCTTTTGATAAGCTG GATAAAATATATTAAATGAAGTACAAGGGTTACTTCAACCCAATACAAGTAGGAACCAAGAGAAAGAAAAAATAAATGTA TCAACTTTACAATAGCTAGATCAATGATCACCAACTAGCTGATAGTACCCACCACCTCCTTAGAGAAAGACTAGGAAAAG TGCTTCATTAAAACCTTACCAGGAAAAACCCCCTTGGGAAAACCTAATGAAGTAAAAGAAGTACACAAATCTTAATTGAA ATCTCCAAGGAGGACTATATAAAATAACACAACTAGTAAAATGACTAATTTTAGCTGCTCAATACAAAACATCAGGACAA TGCAGTAGCCAAAATTCCAGTAGCAAACTGTGTAGTTAGTAAGCCTTCAAATTCCTTCCAAGCAAGATCGGGTATCACTC CAGGATCCAACCTCCAAGCATGTCTGATACCCAAAGAAGCCCCACCATCATGATGTGTTCATTGTACAACAAACATGACA TGCTACTTTGATCAAGCCATCACAATGAAACATTGCAGGACCCACGAGCATCATGGTATCCATTCCACGGCAAAAAATCC ATCAAATTCCATCCCACAGCATGCCTCCCAGCGTATATGCTAGCATCAATCTTCCAAGAAATTGTTCCATCATGCAAATA GGTCCTGCAAATTCAAAACATCTAGAACCAGGCAAAAAATGAGTGACATTACAAACATGAGAAACATGCAACTGGTTCGC TATACCACTCTGAAATTGCATGGATGAAATTTCTATGCTTTGCTCTTAGCCACAACCAAGCTTTCAGTTTGATCTACTCA AAAATCTGTATAGGTTGGACATCTTCCCCTCTAAAAAATTTACCATTTATGCCCACCCACAAATGCCATATATTTGCTAG CCAAACCACCAAGAGCCCCTTCCTGACTGAACCAGAACCAACCCAAACAAATTGCTGCAAGTGCTCCTTAGCAGAAGCTG GAAGAACCATGAACCATCCCAGCCAATTTTTCACAAGAGCCCAAATCTGCCATGAAACTGAGCAACAGAAAAATAGATGA TTCGTTGATTCCTCATATTGTAAGCACAAGGGACAAATAGAGCTATCAATAGCAACATTCCTTCTCATCAAATTTGTTCT AGTTTGAACACGAGCAATTAAAACTCTCCACCCTAAAGCAATTGCGTTCGTACAGGCTTTGCCCACAAATATCTGAATAC GACATCCTCATCCGAATTGTCAAAATCCATAAGCAGAGCTAACAGTATAGATCTCATTCCCTTCCTTTATCCAACACCAC GAATCTTTCTTTCCCCTCACCAAACTTACAAAAAAAAAATGCGTGACATTACAGAGAAACATGCAACTGGTTCGCTATAC CACTCTGAAATTGCATGGAGGAAATTTCTATGCTTTGCTCTTAGCCACAAGCTTTCAGTTTGATCTGCTCAAAATCTGTA TAGGTTGGACATCTTCCCCTCTAAAAAATTTACCATTTATGCCCACCCACAAATGCCATATACTTGCTAGTCAAACCACC AAGAGCCCCTTCCTGACTGAACCAGAACCAACACAAACAAATTGCTGCAAGTGCTCCTTAGCAAAAGCTGGAAGAACCAT GAACCATCCAGCCAATTTTTCACAAGAGCCCAAATCTGCCATGAAACCGAGCAAGAGAAAAATAGATGATTCGTTGATTC CTCATATTGTAAGCACAAGGGACAAATAGAGCTATCAATAGTAACATTCCTTCTCATCAAATTTGTTCTAGTTTGAACAC GATCAATTAAAACTCTCCACCCTAAAGCAATTGCGTTCGTAGGGGCTTGCCCACAAATATCTGAATACGGACCTCCTCAT CCGAATTGTCAAAATTCATAAGCTCCTCATAAGCAGAGCTAACAGTATAGATCTCATTCCCTTCCTTTATCCAACACCAC GAATCTTTCTTTCCCCTCACCAAACTTACAGAAGAAATAATCTTCATAAGTTCCTGCCACTCACCCTGCAAATTGCCACC CACTTCAAATCTCATAACCAACTATCATCATTTCACGACCCCATCGATGTCACCTTATCCTGTTGCTGCTCAGGTATACA ATACAAATCAGCAAATTTCTCCTTAAATTTACCCCACCATGCCAGTCTTCATTCCAAAACTGGATATCATTTCCTTCCCC AACCCTCCTACTCACACAACCCTCAAACCAGTAGCCAGCCGCCTCCCCCGCACAAGATTTAATTAAATCCCTCCACCAAA TAGAAGTCTTTGAAGTTGCCCCATGCCCATATTTTACAGATAAAACTTGACACCATAACTGCTCTCTCTATTATGAAGAA ATCGCCATCTCCACTTTCCAAGTAAAGCAACATTAAATTTCTCTAAATCTCGAACCCCAAGGCCACCCGCCAATTTTGGT TTACAAATTTGGGACCAACTCACCCAACAAATTCTCCTGTCTTCCTCCCCACCACCCCATGTTTTTCTTACTGCACAAGG GTAGTGTGAGCTAAAATCTTTCTAATTTGTGAGTGCTCTCAACAAAGCTTTTAAGTCTATTTTGATTGATAAGTTGGTCG TTAACAACTGCTGCCTGCTAGGACGTGTTATCTAAGCTTGAAAATATTTTACCTAAGGTATATAATTCTTGCTCGCTTAG ATGGGGATAAAAGTAGAATCCTCCACATACAAGGGCACCAACGTAGAACCAACATTTACCTAGGGTATGTCATTCTTGCC CGCTTAGTTAGAGTGTTTCTTATTTTCCCGTCATAAACGATGAAGCGGTAACTGGTTCTACATTGACGCCCTGATAGATT TGCAAACACCATCCGGATTTTGGTCATTGTAATAACATGAAAGTTGGAATTTTATTTGAATCCTGACCCTTTTTTTGTTA ATCATGTTTGTTGTTTGAAATCTATTTAAAAATTTGAATCTTTGATTTATGATTGTTCTAAAAAAGAGAAACCCTCCCTC CAAGGGTTGGCAATTGAGGGAAAGGTTATTCCTTACTTGGTTATAATAACCTGATTGTTGGTAAATCATGCAGATGGTGC CTAACAATTGATATTTATGGATGACCATGGTAGGGCATCGGTAAAGAATTACCTGTAAATCATTGTACAATTGATTCTAA TGTCAAAACCAATTGTAGGGAGATGTTGTTGTCAATAGCTTATGGGTGCCAGATCAGATTCTAAGGGAAATTGATCCGAA CATGCTAATATTCACATTTCATATATCCGTTTTTATCCTATGGTTGGCGGTTATAACACCCGTACTTTTATTTACTGGGC ATATATATAACTGCGATCACTGTTTGTCTTGGATGAAGTAAG
CDS sequence (LotjaGi5g1v0071300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAAACGGCATCCGCCGCCGCCGTCTTCCTCCTCCTCCTCCTCTTCCTCGCCACCCCCTCCACGGCGGAGATCAA GTCCCTCACCATAACCTCCGACACCCGCCCCATGATCCTCTTCGAGCAATTCGGATTCACACACACCGGCCACGTCTCCA TCGCCGTCTCGGAGGTCTCGGTGGCGGCCTCCGCCTCCGCCTCCCAACCCGACCCCTCCCGCCTAGGGTTCTTCCTCCTC AGCGAGGAGTCGCTCATCCAAGTCGCGATTGAGATCCAGCAAAACCCTTCCTTCTGCGTCCTCGATTCACACTACATCAC CCACCTCTTCACCTTCCGCGACCTCTCGCCGCCGCCATCGGCGTCGTTCAACCGCTCCTACCCCGTCACCTTCCCCAACG AGTTCAGCCTCTTCTTCGCCAATTGCGCTCCGGACACCTCCGTCTCCATGGCCGTCCGCACCGAGCTTTACAACCTCGAC AATGACGGCTCCCGCGACTACCTCTCCGCCGGGGTAACCCGCCTGCCTACACTCTTCTCCGTGTTCTCCCTCGCCTACCT CGCCTTCTTCGCTATCTGGGTCTACATCTGCTACACCAACCGCCGCTCCTTCCACCGCATCCACCTCCTCATGGCCGCGC TCCTCCTCATGAAGGCACTCAATCTCATCTGCGCCGCGGAGGACAAGCACTATGTGAAAGTCACCGGCACCCCTCACGGC TGGGACGTCCTCTTCTACATCTTCCAGCTCATCCGCGTCGTGCTTCTCTTCACCGTCATTGTCCTCATCGGCACCGGCTG GTCCTTCCTCAAGCCATTCCTTCAGGAGAAGGAGAAGAAGGTCCTCATGGTTGTCATCCCCCTGCAGGTTCTCGCCAATC TCGCCTCCGTCGTCATTGGCGAGACTGGACCCTTCATCAAGGATTGGGTCACCTGGAACCAGGTTTTCCTTCTGGTTGAT GTCATTTGTTGCTGTGCTATCATCTTCCCCATTGTTTGGTCCATTAGGTCCCTCAGGGAAACTTCCAAGACTGATGGCAA AGCTGCTAGGAACTTGGCCAAGTTAACCCTCTTCAGGCAATTCTATATTGTTGTCATTGGCTACTTGTATTTCACTCGCA TTATTGTCTTTGCCCTCAAAACTATCACGGCTTATAAGTACCGGTGGGTCAGTAATTTCGCCGAGGAGGCTGCTAGTCTT GCCTTTTATGTTGTCATGTTCTACATGTTTCAACCGGTGGAGAAGAATGAGTATTTCGTGCTCGACGAGGAGGAAGAAGA GGCGGCAGAGCTCGCGCTCAGGGAAGAAGAATTTGAGCTTTGA
Protein sequence (LotjaGi5g1v0071300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKTASAAAVFLLLLLFLATPSTAEIKSLTITSDTRPMILFEQFGFTHTGHVSIAVSEVSVAASASASQPDPSRLGFFLL SEESLIQVAIEIQQNPSFCVLDSHYITHLFTFRDLSPPPSASFNRSYPVTFPNEFSLFFANCAPDTSVSMAVRTELYNLD NDGSRDYLSAGVTRLPTLFSVFSLAYLAFFAIWVYICYTNRRSFHRIHLLMAALLLMKALNLICAAEDKHYVKVTGTPHG WDVLFYIFQLIRVVLLFTVIVLIGTGWSFLKPFLQEKEKKVLMVVIPLQVLANLASVVIGETGPFIKDWVTWNQVFLLVD VICCCAIIFPIVWSIRSLRETSKTDGKAARNLAKLTLFRQFYIVVIGYLYFTRIIVFALKTITAYKYRWVSNFAEEAASL AFYVVMFYMFQPVEKNEYFVLDEEEEEAAELALREEEFEL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| TMHMM | 7 | 24 | 18 | - | – | |
| Phobius | 7 | 18 | 12 | - | – | |
| PANTHER | 9 | 440 | 432 | 7.1E-259 | ||
| PANTHER | 9 | 440 | 432 | 7.1E-259 | – | |
| Phobius | 19 | 24 | 6 | - | – | |
| Phobius | 25 | 177 | 153 | - | – | |
| Pfam | 135 | 416 | 282 | 6.1E-50 | ||
| TMHMM | 175 | 197 | 23 | - | – | |
| Phobius | 178 | 198 | 21 | - | – | |
| Phobius | 199 | 206 | 8 | - | – | |
| TMHMM | 204 | 226 | 23 | - | – | |
| Phobius | 207 | 223 | 17 | - | – | |
| Phobius | 224 | 242 | 19 | - | – | |
| Phobius | 243 | 269 | 27 | - | – | |
| TMHMM | 246 | 268 | 23 | - | – | |
| Phobius | 270 | 280 | 11 | - | – | |
| Phobius | 281 | 300 | 20 | - | – | |
| TMHMM | 281 | 303 | 23 | - | – | |
| Phobius | 301 | 311 | 11 | - | – | |
| Phobius | 312 | 335 | 24 | - | – | |
| TMHMM | 313 | 335 | 23 | - | – | |
| Phobius | 336 | 355 | 20 | - | – | |
| TMHMM | 355 | 377 | 23 | - | – | |
| Phobius | 356 | 377 | 22 | - | – | |
| Phobius | 378 | 388 | 11 | - | – | |
| Phobius | 389 | 410 | 22 | - | – | |
| Phobius | 411 | 440 | 30 | - | – | |
| Coils | 421 | 440 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0071300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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