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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0077800 |
Transcript ID | LotjaGi5g1v0077800.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Receptor-like kinase; TAIR: AT1G16670.1 Protein kinase superfamily protein; Swiss-Prot: sp|C0LGH3|Y5614_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g56140; TrEMBL-Plants: tr|A0A0L9TVW5|A0A0L9TVW5_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0077800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:12699955..12702497) extracted from Lotus japonicus Gifu genome v1.2.
GGGCACATCACATCATTATCATCCATTCTATGTTTATCCTTAGCTTACAAATCTTTTATGTTCCTTTTCACACCTCACCT CACGGCTCACGTACCATCTCAGCATCTTCCACAACAAAAAGGTTTCGTCATCTCCCTCAAAAAAAGAATTTAAAATTTCC AAAATGGAGAAACGAGGTTAAGAAACTTTCAAGTAGTAGTAGCTAATTGTTGAATACACGTTCTCCTAAGCCTTCATCAT TCATTCATATATAACACCGAAAACTTACATCGTAGGCAATTATTATTTACCCTTTTCTTAAACTATACCATGATTTCTTT TCTCGCTTGTTTCTCTGCATCAACCACCGAACAAGGTAATTATAGTACAAATTGAATAAAACAAGTTTTCTCAACTTTGA TGATTTGGTTTTCAATTTTTCATTCATCATGTTTTGAACTTACATGCAGATTATCCAGAGGAAGAGAGTGATGGAAGCTT TCGTGTGTTCACTTATAACCAATTGAGATCAGCCACTGCTAATTTCAGTGACAAGATTGGAGAAGGTGGTTTTGGCTCTG TCTACAAGGTAATTTGACTCCATTTTGCTTTGCAATTAGAGTTTGAACTAAAATTAGCTTACTGCATGTTTGGATATCAT TCTACAATTGTTTCGAATACCAGAATTAATTCTGGATTTTGGGGGAAGCTTCTATGAGTAGCTTCTAGAGTTTTAAAAAA GAGTTGATTTTGAGAAAAAAGAAGCTGATCAAAATATGCTATTAATTAGTGTTCATGGTTGGTGTTTGTGATTGATTGGA AATGACTTATTGGGGTTAACTTGATTTGTAAAGGGAAGGCTTAGGGATGGAGCTTTTGTGGCGGTGAAAGTGATTTCAGT TGAGGTAGAATCCATGCGTGGAGAGAGGGAATTTGTGGCGGAATTGGCAACGATGGCGAATATCAAGCACCAAAACCTGG CCATTCTTAGAGGGTGTTGTGTGGAAGGAGCACACAGATATTTGGTCTATGAATACATGGAGAACAAAACCCTCCACCAT ACTTTCCTAGGTAAGTTTGGGATTTCTGTCCTTCTGAATTTCCAAAATAATAAATTTTTGCATATAAGGGTAGTAGCAGT AAAGGACTAGAAATGATTCTGTTTTTATGGATTTTGATCGATAGGTTCTGAGGATAGAAGAATGAAATTCAGCTGGGAAG CAAGGAAAAACATATCCATTGGTGTGGCTAGAGGCTTTGTCTTTCTCCATGAGGAGCTGAGGCCTCATATTGTGCACAGA GACATCAAAGCAGATAATATACTTCTTGATAAGAATTTCACACCAAGAGTTTCAGACTTTGGTCTGGCAAAATTGCTGAG AGATGAAGCATCTTACATCAGTACTAGAGTTGCAGGGACATTGTGAGTGAGAATGCTAAAAACAGTTACCATGACTAAAT CATTTGAATCCTTTTTATTCCTTGACTAATAATGGGGCAATTGTTGTTTTTGAAATGAACAGGGGTTATCTAGCTCCAGA GTATGCTAGTTCAGGAAAGTTGACAAGAAAATCAGATGTTTATAGCTTTGGGGTATTGCTTTTACAAATTGTCACTGGCC AAGCAGTTGTAGATGCCTATCAAGATGATGAACGTTTCATTGTAGAGAAGGTATGAAAATTGGAGTAGAAAAGAACATTT TAACTTGTGGCTAGCAAATTCAGCCTAACTTTGTGGGGGGAAATTGGGAGAGAAAACAAATGATAGAGTTTAAAGTTTAA ACCAAATGGGGTTCCCTTTATTATGTTGTTTCAACTGTTAATTTTATGATTTGGTCAAGGTGAACAAACATGAATGTGTT GGTTTGAACATGTTTGCAGGCTTGGACAGCTTATGAAGCCAACAATCTATTTAGTGTGGTGGATCCAGTGCTTGATTCGA GCGTTCCCGTGGAAGAGGCCATAAAATTTCTCAAAGTTGGTTTGCTTTGTGTGCAGCAAAACGCCAAGCTTCGGCCGCGA ATGTCAGAGGTTGTAGAGAAGCTGACAGTTAATGTTGATATGAAAGATGTTTCAATTTCAAAACCTGGGTTTGTTGCTGA TCTCAGGAACATTAGAATCAAGCAAGAAGTAGCCATGAACTCATTAAGTCCTTCTGGAACATCCTTTGCAAGCTCCATTT GGAGTATGGCCAGTAGTCTTGCTCGTTAATTAGATTCACCATTCATTTGTTTAGGAAATTAGGAAAGGGATCATGCCAAA TTTTGTTGTATAGCATTGCTTGATTGAGTTTTGTTGAAATGTTTATAATCCTGTTTTGTTCTTTGGCTGTATATCATGCA ATGTAGGTTGATTAAATTTGTTTCTTTTTTTAATTAATTTGTGGAATTTTTTTCCTTGGTGAGTGCATCTAGAGGGCCCT GCAATTTGCAAAACCTGCTCTCATGTGGACAGTTTTGTCATCAATTTTCATATTAGTTGGTGATAGTATCCTTTAATTAT GGAGAAGAGTGGACTTTTTTTTTGAACGTGAGAAGAGTGGACTTTAGAACAATAGGTTGTTAG
CDS sequence (LotjaGi5g1v0077800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATTTCTTTTCTCGCTTGTTTCTCTGCATCAACCACCGAACAAGATTATCCAGAGGAAGAGAGTGATGGAAGCTTTCG TGTGTTCACTTATAACCAATTGAGATCAGCCACTGCTAATTTCAGTGACAAGATTGGAGAAGGTGGTTTTGGCTCTGTCT ACAAGGGAAGGCTTAGGGATGGAGCTTTTGTGGCGGTGAAAGTGATTTCAGTTGAGGTAGAATCCATGCGTGGAGAGAGG GAATTTGTGGCGGAATTGGCAACGATGGCGAATATCAAGCACCAAAACCTGGCCATTCTTAGAGGGTGTTGTGTGGAAGG AGCACACAGATATTTGGTCTATGAATACATGGAGAACAAAACCCTCCACCATACTTTCCTAGGTTCTGAGGATAGAAGAA TGAAATTCAGCTGGGAAGCAAGGAAAAACATATCCATTGGTGTGGCTAGAGGCTTTGTCTTTCTCCATGAGGAGCTGAGG CCTCATATTGTGCACAGAGACATCAAAGCAGATAATATACTTCTTGATAAGAATTTCACACCAAGAGTTTCAGACTTTGG TCTGGCAAAATTGCTGAGAGATGAAGCATCTTACATCAGTACTAGAGTTGCAGGGACATTGGGTTATCTAGCTCCAGAGT ATGCTAGTTCAGGAAAGTTGACAAGAAAATCAGATGTTTATAGCTTTGGGGTATTGCTTTTACAAATTGTCACTGGCCAA GCAGTTGTAGATGCCTATCAAGATGATGAACGTTTCATTGTAGAGAAGGCTTGGACAGCTTATGAAGCCAACAATCTATT TAGTGTGGTGGATCCAGTGCTTGATTCGAGCGTTCCCGTGGAAGAGGCCATAAAATTTCTCAAAGTTGGTTTGCTTTGTG TGCAGCAAAACGCCAAGCTTCGGCCGCGAATGTCAGAGGTTGTAGAGAAGCTGACAGTTAATGTTGATATGAAAGATGTT TCAATTTCAAAACCTGGGTTTGTTGCTGATCTCAGGAACATTAGAATCAAGCAAGAAGTAGCCATGAACTCATTAAGTCC TTCTGGAACATCCTTTGCAAGCTCCATTTGGAGTATGGCCAGTAGTCTTGCTCGTTAA
Protein sequence (LotjaGi5g1v0077800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MISFLACFSASTTEQDYPEEESDGSFRVFTYNQLRSATANFSDKIGEGGFGSVYKGRLRDGAFVAVKVISVEVESMRGER EFVAELATMANIKHQNLAILRGCCVEGAHRYLVYEYMENKTLHHTFLGSEDRRMKFSWEARKNISIGVARGFVFLHEELR PHIVHRDIKADNILLDKNFTPRVSDFGLAKLLRDEASYISTRVAGTLGYLAPEYASSGKLTRKSDVYSFGVLLLQIVTGQ AVVDAYQDDERFIVEKAWTAYEANNLFSVVDPVLDSSVPVEEAIKFLKVGLLCVQQNAKLRPRMSEVVEKLTVNVDMKDV SISKPGFVADLRNIRIKQEVAMNSLSPSGTSFASSIWSMASSLAR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 4 | 351 | 348 | 2.4E-165 | – | |
PANTHER | 4 | 351 | 348 | 2.4E-165 | – | |
Gene3D | 11 | 116 | 106 | 1.3E-29 | – | |
SUPERFAMILY | 23 | 311 | 289 | 1.75E-75 | ||
SMART | 39 | 313 | 275 | 5.7E-32 | ||
ProSiteProfiles | 39 | 313 | 275 | 36.965 | ||
Pfam | 42 | 309 | 268 | 1.7E-48 | ||
CDD | 45 | 312 | 268 | 5.30764E-93 | – | |
ProSitePatterns | 45 | 67 | 23 | - | ||
Gene3D | 117 | 323 | 207 | 2.3E-56 | – | |
ProSitePatterns | 163 | 175 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0077800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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