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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • cd14066
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 756 results. Now displaying 1 of 16 with 50 rows per page. This search has taken 0.364s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj1g3v3023720.1
LjKlavier leucine-rich repeat receptor-like kinase [Lotus japonicus] gi|353677868|dbj|BAL04590.1| chr1 34474974 34479067 +
1 domain prediction
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Lj2g3v1467920.1
LjSymRK receptor-like kinase SYMRK [Lotus japonicus] gi|21622628|gb|AAM67418.1|AF492655_1 chr2 23244149 23250251 -
1 domain prediction
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Lj4g3v0281040.1
LjFls2 flagellin-sensing 2-like protein [Lotus japonicus] gi|355346200|gb|AER60531.1| chr4 3284600 3289068 +
1 domain prediction
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Lj0g3v0019539.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502083819|ref|XP_004487574.1| chr0 7745945 7749305 -
1 domain prediction
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Lj0g3v0022049.1
n.a. NAK-type protein kinase precursor [Glycine max] gi|351727489|ref|NP_001238698.1| chr0 8903111 8905216 +
1 domain prediction
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Lj0g3v0035439.1
n.a. PREDICTED: probable receptor-like protein kinase At1g11050-like [Cicer arietinum] gi|502124054|ref|XP_004498364.1| chr0 11295149 11297703 -
1 domain prediction
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Lj0g3v0058439.1
n.a. PREDICTED: probable receptor-like protein kinase At2g42960-like [Glycine max] gi|356501467|ref|XP_003519546.1| chr0 19220972 19225538 -
1 domain prediction
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Lj0g3v0059499.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X2 [Cicer arietinum] gi|502166662|ref|XP_004513950.1| chr0 19683288 19688507 +
1 domain prediction
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Lj0g3v0059509.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Glycine max] gi|356545297|ref|XP_003541080.1| chr0 19690149 19694423 +
1 domain prediction
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Lj0g3v0061859.1
n.a. PREDICTED: probable receptor-like protein kinase At5g47070-like [Cicer arietinum] gi|502152552|ref|XP_004508979.1| chr0 20771290 20775478 +
1 domain prediction
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Lj0g3v0067799.2
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 25-like [Glycine max] gi|356575773|ref|XP_003556011.1| chr0 24129425 24131578 -
1 domain prediction
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Lj0g3v0073629.1
n.a. PREDICTED: probable L-type lectin-domain containing receptor kinase S.5-like [Glycine max] gi|356498420|ref|XP_003518050.1| chr0 27656698 27659079 +
1 domain prediction
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Lj0g3v0075369.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Cicer arietinum] gi|502135214|ref|XP_004502257.1| chr0 28565917 28573472 +
1 domain prediction
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Lj0g3v0084029.1
n.a. PREDICTED: LOW QUALITY PROTEIN: wall-associated receptor kinase 2-like [Cicer arietinum] gi|502136069|ref|XP_004502549.1| chr0 33421371 33426989 +
1 domain prediction
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Lj0g3v0088019.1
n.a. Lectin receptor-like kinase Tg-20 [Medicago truncatula] gi|357517167|ref|XP_003628872.1| chr0 35898490 35900862 -
1 domain prediction
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Lj0g3v0112879.2
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like isoform X1 [Cicer arietinum] gi|502166659|ref|XP_004513949.1| chr0 49268904 49272257 +
1 domain prediction
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Lj0g3v0115159.1
n.a. PREDICTED: probable receptor-like protein kinase At4g39110-like [Glycine max] gi|356542359|ref|XP_003539634.1| chr0 50578610 50582102 -
1 domain prediction
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Lj0g3v0135119.1
n.a. PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1-like [Cicer arietinum] gi|502154452|ref|XP_004509705.1| chr0 62037472 62041504 +
1 domain prediction
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Lj0g3v0161519.1
n.a. PREDICTED: probable inactive receptor kinase At1g48480-like [Glycine max] gi|356499089|ref|XP_003518376.1| chr0 75992903 75996790 -
1 domain prediction
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Lj0g3v0173389.1
n.a. ERECTA [Glycine max] gi|351724175|ref|NP_001235257.1| chr0 83382374 83384990 -
1 domain prediction
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Lj0g3v0193779.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290-like [Cicer arietinum] gi|502084183|ref|XP_004487641.1| chr0 94600710 94603351 +
1 domain prediction
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Lj0g3v0211449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502171796|ref|XP_004515104.1| chr0 106530167 106534430 +
1 domain prediction
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Lj0g3v0213759.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X2 [Cicer arietinum] gi|502083819|ref|XP_004487574.1| chr0 108025732 108028971 -
1 domain prediction
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Lj0g3v0220159.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635233 112639990 -
1 domain prediction
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Lj0g3v0220169.1
n.a. PREDICTED: phytosulfokine receptor 2-like [Glycine max] gi|356546862|ref|XP_003541841.1| chr0 112635481 112639990 -
1 domain prediction
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Lj0g3v0221179.1
n.a. PREDICTED: receptor-like serine/threonine-protein kinase ALE2-like [Glycine max] gi|356536862|ref|XP_003536952.1| chr0 113421794 113427792 +
1 domain prediction
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Lj0g3v0249939.1
n.a. Kinase-like protein [Medicago truncatula] gi|357454055|ref|XP_003597308.1| chr0 129568127 129572119 -
1 domain prediction
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Lj0g3v0250199.1
n.a. PREDICTED: cysteine-rich receptor-like protein kinase 29-like [Glycine max] gi|356574368|ref|XP_003555320.1| chr0 129693879 129697385 +
1 domain prediction
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Lj0g3v0252549.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2-like [Cicer arietinum] gi|502157130|ref|XP_004510769.1| chr0 130962861 130966414 +
1 domain prediction
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Lj0g3v0255899.1
n.a. protein kinase family protein [Glycine max] gi|351724465|ref|NP_001235011.1| chr0 132886409 132888985 +
1 domain prediction
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Lj0g3v0255909.1
n.a. PREDICTED: probable receptor-like protein kinase At2g23200-like [Cicer arietinum] gi|502152796|ref|XP_004509098.1| chr0 132889208 132890885 -
1 domain prediction
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Lj0g3v0257389.1
n.a. PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic-like [Glycine max] gi|356529677|ref|XP_003533415.1| chr0 133590151 133594622 +
1 domain prediction
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Lj0g3v0257449.1
n.a. PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300-like [Cicer arietinum] gi|502124903|ref|XP_004498719.1| chr0 133648660 133651802 -
1 domain prediction
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Lj0g3v0257499.1
n.a. PREDICTED: probable receptor protein kinase TMK1-like [Glycine max] gi|356521171|ref|XP_003529231.1| chr0 133666414 133670992 -
1 domain prediction
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Lj0g3v0259209.1
n.a. FERONIA receptor-like kinase [Glycine max] gi|351724969|ref|NP_001237588.1| chr0 134690484 134692543 +
1 domain prediction
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Lj0g3v0259229.1
n.a. protein kinase APK1A, chloroplastic-like [Glycine max] gi|359807309|ref|NP_001240863.1| chr0 134707127 134710049 +
1 domain prediction
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Lj0g3v0259229.2
n.a. protein kinase APK1A, chloroplastic-like [Glycine max] gi|359807309|ref|NP_001240863.1| chr0 134707127 134710049 +
1 domain prediction
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Lj0g3v0262369.1
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X1 [Cicer arietinum] gi|502121751|ref|XP_004497429.1| chr0 135981117 135986723 -
1 domain prediction
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Lj0g3v0262369.2
n.a. PREDICTED: serine/threonine-protein kinase PBS1-like isoform X1 [Cicer arietinum] gi|502121751|ref|XP_004497429.1| chr0 135981117 135986723 -
1 domain prediction
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Lj0g3v0268469.2
n.a. protein kinase [Glycine max] gi|351726644|ref|NP_001235086.1| chr0 138974609 138976523 +
1 domain prediction
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Lj0g3v0272399.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730-like [Glycine max] gi|356549811|ref|XP_003543284.1| chr0 141143469 141148061 -
1 domain prediction
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Lj0g3v0275209.1
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124155|ref|XP_004498409.1| chr0 142749560 142751112 -
1 domain prediction
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Lj0g3v0275209.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124155|ref|XP_004498409.1| chr0 142749560 142753392 -
1 domain prediction
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Lj0g3v0275229.1
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142760533 -
1 domain prediction
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Lj0g3v0275229.2
n.a. PREDICTED: probable receptor-like protein kinase At1g67000-like [Cicer arietinum] gi|502124170|ref|XP_004498415.1| chr0 142757370 142760533 -
1 domain prediction
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Lj0g3v0275229.4
n.a. PREDICTED: probable receptor-like protein kinase At5g39020-like [Glycine max] gi|356573827|ref|XP_003555057.1| chr0 142757370 142761799 -
1 domain prediction
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Lj0g3v0276029.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X2 [Cicer arietinum] gi|502164208|ref|XP_004513082.1| chr0 143146225 143150724 -
1 domain prediction
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Lj0g3v0276029.2
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g29180-like isoform X1 [Cicer arietinum] gi|502164205|ref|XP_004513081.1| chr0 143146225 143151476 -
1 domain prediction
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Lj0g3v0281699.1
n.a. PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At3g14840-like [Cicer arietinum] gi|502165279|ref|XP_004513505.1| chr0 146062372 146066727 +
1 domain prediction
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Lj0g3v0286449.1
n.a. PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g51880-like [Glycine max] gi|356556621|ref|XP_003546622.1| chr0 148819423 148823480 -
1 domain prediction
 –