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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0170500 |
| Transcript ID | LotjaGi5g1v0170500.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT3G63280.1 NIMA-related kinase 4; Swiss-Prot: sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2; TrEMBL-Plants: tr|I1L868|I1L868_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0170500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43897760..43902760) extracted from Lotus japonicus Gifu genome v1.2.
CGGGAAAAGGACGCAAGCAACAAAAAGAGAGAGAAAGAAATAAATTAAAGAGAGAGCAGAGCACGGGAACACTGATGTAA GGACACTAGCTAGGGGGTCCTCACGCTTCTCTTCCACTCCACATTTACTTCAAATCACCATTTTCAACTTGGTGATTATT TTTTTAGTTTCACTCTTTCTCTCTGAATGAAGTGAAGTGAAGTGGGTTTGATTTTCAGCTGAAAAAATGGAGCAGTATGA AGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAACAAAAAGTAACCAC CCCATTCTACTCTCATTTCTTCTAAGTTCTAACTCAGTAATCTATGTTTGATTCAACTAGGTTATTTTACTTCAAATGTT TTATTTATCATGTTTGGTTATACTAAGCTCCTATGTTAATTTTTATGTATTCAGGTATGTTCTTAAGAAGATTCGCCTTG CCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGGTAGTAGTAGTAATAATGCTCCTTGTTTTTTTTCCTTTT TTTTTAGTTGAAGTTTAATTTTTTTGGCAGCTTGAGATGTTTTAGCCTAAGTTTTATAATTGATTTTTAGTCCATAACGT ATAATAGTTACAATGCAGTTCTTTCTAATTATTGGGTTACATTCTAAAATGTGATACTGGATGCTTGCTATTCTTATATG CTTTGTTGGACTCTGGTTTTGCAGATGGAGCTCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGATTCATG GGTAGAAAAGGTCAGACATTTAAAAAAATCAATAATTTTTTTTTGTAAAATATTGTTGCTTTTTCTTGTTCTGTTGTGTT CTGGTTAATTTGATTTACTAAGATTTTCAGGAGACCCCCCATTTTAGTTTAAGTTGACAAAAGTGAATAATATTCACTTG TTTCTTCATAAATGCTGATACTTTTAGTTGATGGTGGAACATCCTAATGTAACACGGTATATGGTTTTATACTATTTTAT TAATTTTGATTCTGAAATTTGCAATCTGGTACCTTCACCTCCAGGGTTGTTTTGTATGTATTGTCATTGGCTACTGTGAA GGAGGAGATATGTAAGTCATGGTTCACATTGAATTCAAGCATTTGAGGAACTCAGAATATTTATGGAGACATTTTATCTT TCCTTTGCTAATAATACATTCCCTCTATAATTTATATGCTGCACAGGGCTGAAGCTATTAAAAAGGCCAATTGTGTTCAT TTTTCGGAAGAGGTTTGTCACTCTTGCAGCAGCTTCTTTTACTTCTGAATAATTTTCATTCCTATGTGAAAACCTGTTGG TGCTTTTAACTAATTGATATCTATAAACTTTTGTACGCAGAGGCTTTGTAAATGGCTTGTTCAACTGCTGATGGCACTTG ATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGGTGAATGATTTCTCTAAATTCAATAACCGATGGGGTTAT GTAGCTGGCTATCTGAAACCTTCGAGAACCTACTTTATACTGATGTTTATCCACATCAATTTCAGTGTTCAAATATCTTT TTGACAAGAGATCAAGATATACGTCTAGGTAATGACTTTCTTCATTCTATCCTTTAGCCTCACTCAGACTTCATGAATGT GTTCAAAGTGTAAACATCTCTAATTTGTGCCTTGTTTTGGTAACCTATTCTTATGCATGGATGCAGGTGACTTTGGTCTT GCCAAAATGTTAACATGTGATGATCTTGCTTCCTCGGTACGTGTTTTGGTCAAAATATTCTTTTGATCACTTTTACTTTA TCTCTTACTGTGTTCTTGACTTGCTTTACACTTCAGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTGGCTGA TATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTAAGATAGTACTATTTGTACTCTCAAGATCCTGTGGGCATA AAAACCCTTCCCCTTTCCCTGTTACAATTTTCTGTCAATTGCAATTGAAATTGGGTATAACATAAACATTGTGTCAGGAT GCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGTAAGTTACTATGACTGCCAGTTGTTCACTTCT ATTTTAATGAACCATTATTTGCAGAACTTTTTTATCATAAGGGGAACCTGGTGGGGGGTCAAATAATTCATTTGAAATGT TGAACAAAATATTTACGTTACTTCATCATTCATGTCCATGGTGATGTCTGAGTTATTTCATTATGGAGAACAACATCAAA TCAATGACTTTTTGTTGTCTTCTATTCGAGCAGGATATGCAAGCATTGATTAACAAAATAAACAAGTCTTTAGTGGCTCC ACTACCAACAATGTATTCTGGTTCTTTGTGAGTACTCTATTTACTAAGAATCTTATGTTAATCTTTATCTGTATTTTCCC CATTTTATGAAGCGGTTATGTTAGTTCCCATACCTGCAGCATTTGAGTGATGTCTGTGCCTGGTTTATTGGGATATGCAT ATATTGCTGATCCTGAAAAAAATGCATCCATTAGTTTGTCAGACGGAGACCTCCATTAGATTTTGTCTTACATTTTCTAA TGGACCCAAAGTTGTTGCGAATTGGAAATTTAAGTGATCTTGCATCCATGAAGTGTTTATGTCATCATTTTGAAAACATC TACACCTTATCTTTCAATTCACTTAGTATTAGCATTCTTTGTGTCAGAAACATGTACAGTATGGGGTTTGGTTTACCAAT TTACATTGTGCAATGATAACCTGCTGGTTTAGCAGCAATCAACCTTGAAACAAATCCTAATACACTCCCAGATGTGGATA TATCTTATTGACTCATTCTCAGTCTTTGTACTTGTTATTTGTTGCTGTTTATTCCATTGACCCATTAAATGACTTTATGT AACTTGATGTATATTGTTTTCTTCTTTCAGTCGAGGCCTTGTGAAGAGTATGCTACGGAAAAATCCAGAGCTTAGGCCAA GTGTATGTTTTCTCTCGAGAATTTCTTTTATATTTTTCTATATGTAGATTAACTTAGGAAAAACTGGTCTATACAAAGTA AGTGTAATGCATATCTTGAGTTATAAAGATGAGTCAGATGTCCTAACAGCAGAATATGTTTAGAAGCAGAATATGAGCCA ATTGTTATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAATTGTTTGTCAGCGTGTAATTTGCTCTT TTTCCATCATCATATAATGTGTTTGTGCTTATTCTGCTTGGTTACTTTGTTTTGGTAGATTTATTCAAAATGAGTTAAGC GCAATTTGTTTTCGCAGGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACATAAAACTA AATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAGAGCCAGC ATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCTAGTATTT CTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACATTATGAA CAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCAGACGACA CACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCAGTAAGTTTAAGCACACTAACAACACAGCAGCTCC ATTTGTATTCATTTGATAATATAGTGCTAATTACGGAGTTTTCTAATTACATATCACCTATATTTCCTAACTCGAGTTTA GTTACTCTTATACGCAGATTCTCTTATCCATATTAATTTTCAATAGAGCTTAACTTGTCTGGGTTTCTTTGTTGAATTAA TAGTGTGTGTGTGTGTGTGTGTTACTGAAGATTCTGTGCATCGATTTATTTGTTTGCTTATCATCATTTCAGCTTCCAGC ATCTTATACTCCAGCTGGTAAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGCCACTA CTACCCCTTATAGAACCAGTGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAATCGAC AAGATGGCTGAATTCCCTCTGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCAGCTCA GTGCTCTTCTGGTTCCCCAAGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGACAAAG CCAGTGTCCCTACCAGTGGCAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAACTGCT GTTTCAAGCCGTAGCCATTCCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGAGCGGA GGCATTGGAGGGGTTGCTTGAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCTGAAGC CGTTCGGGCAAGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTATGAGGC TTTCTGATGCACATGCACTTTTGTGATCACTAACAACAGTGTAAATCAATGTAGCAGTAGACAGTAGTACTTTATATGTA GCTAGAATTTGAAGGGTAACTTAGCTTCTAATCTTATAATTCTAGTTGACTCCGTAGGTAGGCATTTCTTAGACAGTTTC AACTTTCAAGTTTAATGTTAATGACTTTCTCATCAAAATATCAGTATAGATGTTCAAATTCTTCTGTTTGCGGGAAAAGA AACTCTAATTTAGTTTGTAATGTAGGCAATGTCAGTATGAA
CDS sequence (LotjaGi5g1v0170500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAGTATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAA CAAAAAGTATGTTCTTAAGAAGATTCGCCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGATGGAGC TCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGATTCATGGGTAGAAAAGGGTTGTTTTGTATGTATTGTC ATTGGCTACTGTGAAGGAGGAGATATGGCTGAAGCTATTAAAAAGGCCAATTGTGTTCATTTTTCGGAAGAGAGGCTTTG TAAATGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAA ATATCTTTTTGACAAGAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCCAAAATGTTAACATGTGATGATCTTGCT TCCTCGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTGGCTGATATACCCTATGGCTCTAAGTCAGATATCTG GTCTTTGGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGATATGCAAGCATTGATTAACA AAATAAACAAGTCTTTAGTGGCTCCACTACCAACAATGTATTCTGGTTCTTTTCGAGGCCTTGTGAAGAGTATGCTACGG AAAAATCCAGAGCTTAGGCCAAGTGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACAT AAAACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAG AGCCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCT AGTATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACA TTATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCA GACGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCACTTCCAGCATCTTATACTCCAGCTGGT AAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGCCACTACTACCCCTTATAGAACCAG TGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAATCGACAAGATGGCTGAATTCCCTC TGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCAGCTCAGTGCTCTTCTGGTTCCCCA AGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGACAAAGCCAGTGTCCCTACCAGTGG CAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAACTGCTGTTTCAAGCCGTAGCCATT CCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGAGCGGAGGCATTGGAGGGGTTGCTT GAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCTGAAGCCGTTCGGGCAAGAGAAGGT TTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTATGA
Protein sequence (LotjaGi5g1v0170500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQYEVLEQIGKGSFASALLVRHKHENKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIV IGYCEGGDMAEAIKKANCVHFSEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLTCDDLA SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTMYSGSFRGLVKSMLR KNPELRPSAAELLNHPHLQPYILKVHIKLNSPRRSTFPFQWADSNYARRTRFVEPASFSTLSVSDRGKRLSFSNDRALNP SISGTEQGSLCSTQRAQGFSACSKDKHYEQSVGCVSEECNMPRMRTAKESATPRRHTIPSKIPRISSKYDSLPASYTPAG KLTPPTRRASLPLPTTTMATTTPYRTSVGFLRSVDSPNISVNAPRIDKMAEFPLASGENIPLFPARRASSTSAQCSSGSP RSIIDCTITKDKCTIQVVDKASVPTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLL EFSARLLQQQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 604 | 604 | 0.0 | – | |
| SUPERFAMILY | 1 | 316 | 316 | 2.43E-82 | ||
| PANTHER | 1 | 604 | 604 | 0.0 | – | |
| Gene3D | 1 | 83 | 83 | 3.0E-21 | – | |
| CDD | 3 | 258 | 256 | 7.87857E-136 | – | |
| ProSiteProfiles | 4 | 258 | 255 | 44.951 | ||
| SMART | 4 | 258 | 255 | 2.9E-82 | ||
| Pfam | 4 | 257 | 254 | 2.5E-63 | ||
| ProSitePatterns | 10 | 33 | 24 | - | ||
| Gene3D | 84 | 273 | 190 | 5.5E-57 | – | |
| ProSitePatterns | 125 | 137 | 13 | - | ||
| MobiDBLite | 395 | 419 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0170500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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