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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0170500 |
Transcript ID | LotjaGi5g1v0170500.2 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT3G63280.1 NIMA-related kinase 4; Swiss-Prot: sp|A2ZMH2|NEK2_ORYSI Serine/threonine-protein kinase Nek2; TrEMBL-Plants: tr|I1L868|I1L868_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0170500 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:43897595..43902864) extracted from Lotus japonicus Gifu genome v1.2.
GGTATTGTGACTATTTGTGAGTGAGAGGGCGGCAAATGAAAAGAGAATTGGAAAAAGAAGTAATGCAAGCAAACTGAAAA AGAAAAAGACAGAGCCAGAAATGGTTCAACAAACACATCACATAGAAATAGGAGCAGGTCAAAGTCTTCAAAAGTGTGTG TATTCCGGGAAAAGGACGCAAGCAACAAAAAGAGAGAGAAAGAAATAAATTAAAGAGAGAGCAGAGCACGGGAACACTGA TGTAAGGACACTAGCTAGGGGGTCCTCACGCTTCTCTTCCACTCCACATTTACTTCAAATCACCATTTTCAACTTGGTGA TTATTTTTTTAGTTTCACTCTTTCTCTCTGAATGAAGTGAAGTGAAGTGGGTTTGATTTTCAGCTGAAAAAATGGAGCAG TATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAACAAAAAGTA ACCACCCCATTCTACTCTCATTTCTTCTAAGTTCTAACTCAGTAATCTATGTTTGATTCAACTAGGTTATTTTACTTCAA ATGTTTTATTTATCATGTTTGGTTATACTAAGCTCCTATGTTAATTTTTATGTATTCAGGTATGTTCTTAAGAAGATTCG CCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGGTAGTAGTAGTAATAATGCTCCTTGTTTTTTTTC CTTTTTTTTTAGTTGAAGTTTAATTTTTTTGGCAGCTTGAGATGTTTTAGCCTAAGTTTTATAATTGATTTTTAGTCCAT AACGTATAATAGTTACAATGCAGTTCTTTCTAATTATTGGGTTACATTCTAAAATGTGATACTGGATGCTTGCTATTCTT ATATGCTTTGTTGGACTCTGGTTTTGCAGATGGAGCTCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGAT TCATGGGTAGAAAAGGTCAGACATTTAAAAAAATCAATAATTTTTTTTTGTAAAATATTGTTGCTTTTTCTTGTTCTGTT GTGTTCTGGTTAATTTGATTTACTAAGATTTTCAGGAGACCCCCCATTTTAGTTTAAGTTGACAAAAGTGAATAATATTC ACTTGTTTCTTCATAAATGCTGATACTTTTAGTTGATGGTGGAACATCCTAATGTAACACGGTATATGGTTTTATACTAT TTTATTAATTTTGATTCTGAAATTTGCAATCTGGTACCTTCACCTCCAGGGTTGTTTTGTATGTATTGTCATTGGCTACT GTGAAGGAGGAGATATGTAAGTCATGGTTCACATTGAATTCAAGCATTTGAGGAACTCAGAATATTTATGGAGACATTTT ATCTTTCCTTTGCTAATAATACATTCCCTCTATAATTTATATGCTGCACAGGGCTGAAGCTATTAAAAAGGCCAATTGTG TTCATTTTTCGGAAGAGGTTTGTCACTCTTGCAGCAGCTTCTTTTACTTCTGAATAATTTTCATTCCTATGTGAAAACCT GTTGGTGCTTTTAACTAATTGATATCTATAAACTTTTGTACGCAGAGGCTTTGTAAATGGCTTGTTCAACTGCTGATGGC ACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGGTGAATGATTTCTCTAAATTCAATAACCGATGGG GTTATGTAGCTGGCTATCTGAAACCTTCGAGAACCTACTTTATACTGATGTTTATCCACATCAATTTCAGTGTTCAAATA TCTTTTTGACAAGAGATCAAGATATACGTCTAGGTAATGACTTTCTTCATTCTATCCTTTAGCCTCACTCAGACTTCATG AATGTGTTCAAAGTGTAAACATCTCTAATTTGTGCCTTGTTTTGGTAACCTATTCTTATGCATGGATGCAGGTGACTTTG GTCTTGCCAAAATGTTAACATGTGATGATCTTGCTTCCTCGGTACGTGTTTTGGTCAAAATATTCTTTTGATCACTTTTA CTTTATCTCTTACTGTGTTCTTGACTTGCTTTACACTTCAGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTG GCTGATATACCCTATGGCTCTAAGTCAGATATCTGGTCTTTGGGTAAGATAGTACTATTTGTACTCTCAAGATCCTGTGG GCATAAAAACCCTTCCCCTTTCCCTGTTACAATTTTCTGTCAATTGCAATTGAAATTGGGTATAACATAAACATTGTGTC AGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGTAAGTTACTATGACTGCCAGTTGTTCA CTTCTATTTTAATGAACCATTATTTGCAGAACTTTTTTATCATAAGGGGAACCTGGTGGGGGGTCAAATAATTCATTTGA AATGTTGAACAAAATATTTACGTTACTTCATCATTCATGTCCATGGTGATGTCTGAGTTATTTCATTATGGAGAACAACA TCAAATCAATGACTTTTTGTTGTCTTCTATTCGAGCAGGATATGCAAGCATTGATTAACAAAATAAACAAGTCTTTAGTG GCTCCACTACCAACAATGTATTCTGGTTCTTTGTGAGTACTCTATTTACTAAGAATCTTATGTTAATCTTTATCTGTATT TTCCCCATTTTATGAAGCGGTTATGTTAGTTCCCATACCTGCAGCATTTGAGTGATGTCTGTGCCTGGTTTATTGGGATA TGCATATATTGCTGATCCTGAAAAAAATGCATCCATTAGTTTGTCAGACGGAGACCTCCATTAGATTTTGTCTTACATTT TCTAATGGACCCAAAGTTGTTGCGAATTGGAAATTTAAGTGATCTTGCATCCATGAAGTGTTTATGTCATCATTTTGAAA ACATCTACACCTTATCTTTCAATTCACTTAGTATTAGCATTCTTTGTGTCAGAAACATGTACAGTATGGGGTTTGGTTTA CCAATTTACATTGTGCAATGATAACCTGCTGGTTTAGCAGCAATCAACCTTGAAACAAATCCTAATACACTCCCAGATGT GGATATATCTTATTGACTCATTCTCAGTCTTTGTACTTGTTATTTGTTGCTGTTTATTCCATTGACCCATTAAATGACTT TATGTAACTTGATGTATATTGTTTTCTTCTTTCAGTCGAGGCCTTGTGAAGAGTATGCTACGGAAAAATCCAGAGCTTAG GCCAAGTGTATGTTTTCTCTCGAGAATTTCTTTTATATTTTTCTATATGTAGATTAACTTAGGAAAAACTGGTCTATACA AAGTAAGTGTAATGCATATCTTGAGTTATAAAGATGAGTCAGATGTCCTAACAGCAGAATATGTTTAGAAGCAGAATATG AGCCAATTGTTATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTAAATTGTTTGTCAGCGTGTAATTTG CTCTTTTTCCATCATCATATAATGTGTTTGTGCTTATTCTGCTTGGTTACTTTGTTTTGGTAGATTTATTCAAAATGAGT TAAGCGCAATTTGTTTTCGCAGGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACATAA AACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAGAG CCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCTAG TATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACATT ATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCAGA CGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCAGTAAGTTTAAGCACACTAACAACACAGCA GCTCCATTTGTATTCATTTGATAATATAGTGCTAATTACGGAGTTTTCTAATTACATATCACCTATATTTCCTAACTCGA GTTTAGTTACTCTTATACGCAGATTCTCTTATCCATATTAATTTTCAATAGAGCTTAACTTGTCTGGGTTTCTTTGTTGA ATTAATAGTGTGTGTGTGTGTGTGTGTTACTGAAGATTCTGTGCATCGATTTATTTGTTTGCTTATCATCATTTCAGCTT CCAGCATCTTATACTCCAGCTGGTAAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGC CACTACTACCCCTTATAGAACCAGTGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAA TCGACAAGATGGCTGAATTCCCTCTGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCA GCTCAGTGCTCTTCTGGTTCCCCAAGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGA CAAAGCCAGTGTCCCTACCAGTGGCAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAA CTGCTGTTTCAAGCCGTAGCCATTCCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGA GCGGAGGCATTGGAGGGGTTGCTTGAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCT GAAGCCGTTCGGGCAAGAGAAGGTTTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTAT GAGGCTTTCTGATGCACATGCACTTTTGTGATCACTAACAACAGTGTAAATCAATGTAGCAGTAGACAGTAGTACTTTAT ATGTAGCTAGAATTTGAAGGGTAACTTAGCTTCTAATCTTATAATTCTAGTTGACTCCGTAGGTAGGCATTTCTTAGACA GTTTCAACTTTCAAGTTTAATGTTAATGACTTTCTCATCAAAATATCAGTATAGATGTTCAAATTCTTCTGTTTGCGGGA AAAGAAACTCTAATTTAGTTTGTAATGTAGGCAATGTCAGTATGAAAAAAGTTTATCCTTCCATTTTGTGATGTATTTTC ACATTATCGAAGTTTTTTTTAGGATACACATTATCTAAGAAGTTTGATAAATAAAATGATAATACATGGG
CDS sequence (LotjaGi5g1v0170500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCAGTATGAAGTTCTAGAACAGATTGGCAAGGGTTCCTTTGCTTCTGCTCTGCTTGTCAGGCACAAGCACGAAAA CAAAAAGTATGTTCTTAAGAAGATTCGCCTTGCCCGCCAGACTGACAGAACACGTAGATCTGCACACCAGGAGATGGAGC TCATCTCTAAAGTGAGAAATCCATTTATTGTAGAGTATAAAGATTCATGGGTAGAAAAGGGTTGTTTTGTATGTATTGTC ATTGGCTACTGTGAAGGAGGAGATATGGCTGAAGCTATTAAAAAGGCCAATTGTGTTCATTTTTCGGAAGAGAGGCTTTG TAAATGGCTTGTTCAACTGCTGATGGCACTTGATTACTTGCATGCAAATCATATTCTTCATCGTGATGTCAAGTGTTCAA ATATCTTTTTGACAAGAGATCAAGATATACGTCTAGGTGACTTTGGTCTTGCCAAAATGTTAACATGTGATGATCTTGCT TCCTCGGTTGTGGGAACACCAAGTTATATGTGCCCAGAGCTCCTGGCTGATATACCCTATGGCTCTAAGTCAGATATCTG GTCTTTGGGATGCTGTGTATATGAAATGGCTGCTCACAAGCCAGCTTTTAAAGCTCTTGATATGCAAGCATTGATTAACA AAATAAACAAGTCTTTAGTGGCTCCACTACCAACAATGTATTCTGGTTCTTTTCGAGGCCTTGTGAAGAGTATGCTACGG AAAAATCCAGAGCTTAGGCCAAGTGCAGCAGAGTTACTCAATCATCCACATCTTCAACCTTATATTCTTAAAGTTCACAT AAAACTAAATAGCCCCAGAAGAAGTACTTTTCCTTTCCAATGGGCTGACTCAAACTATGCAAGGAGAACACGGTTTGTAG AGCCAGCATCTTTTTCCACTCTTTCTGTCTCCGACAGAGGTAAACGATTGTCATTCAGTAATGACAGGGCCTTGAATCCT AGTATTTCTGGAACTGAACAAGGTTCTCTGTGTTCTACTCAAAGAGCACAAGGATTCTCTGCTTGTTCAAAAGACAAACA TTATGAACAATCTGTTGGCTGTGTCAGTGAAGAATGCAATATGCCAAGAATGAGAACAGCTAAGGAATCTGCCACCCCCA GACGACACACAATACCATCGAAGATACCCCGAATTAGTTCCAAATATGATTCACTTCCAGCATCTTATACTCCAGCTGGT AAACTTACCCCACCAACTCGCAGAGCTTCCCTTCCACTGCCTACAACAACCATGGCCACTACTACCCCTTATAGAACCAG TGTCGGTTTTCTTCGTAGTGTGGATTCTCCTAATATTTCTGTTAATGCGCCACGAATCGACAAGATGGCTGAATTCCCTC TGGCCTCCGGTGAGAATATTCCTCTCTTCCCTGCTCGTAGAGCTTCATCAACATCAGCTCAGTGCTCTTCTGGTTCCCCA AGGAGCATTATTGACTGCACAATCACAAAGGACAAATGCACAATCCAGGTTGTGGACAAAGCCAGTGTCCCTACCAGTGG CAGTGATGGTGGTGCTGCAGTTTCACATAGCAACGAGTGCTCTGAACATGTAGCAACTGCTGTTTCAAGCCGTAGCCATT CCTCCTCTGCTGAGTCTTGCCAGCGCAGGTTTGACACCTCGTCTTACCAGCAGCGAGCGGAGGCATTGGAGGGGTTGCTT GAGTTCAGCGCACGGCTCCTGCAACAGCAGAGGTTTGAAGAGCTTGGCGTGTTGCTGAAGCCGTTCGGGCAAGAGAAGGT TTCTCCAAGGGAAACAGCTATTTGGTTGACTAAGAGCTTCAAAGAAACTGTGGTATGA
Protein sequence (LotjaGi5g1v0170500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEQYEVLEQIGKGSFASALLVRHKHENKKYVLKKIRLARQTDRTRRSAHQEMELISKVRNPFIVEYKDSWVEKGCFVCIV IGYCEGGDMAEAIKKANCVHFSEERLCKWLVQLLMALDYLHANHILHRDVKCSNIFLTRDQDIRLGDFGLAKMLTCDDLA SSVVGTPSYMCPELLADIPYGSKSDIWSLGCCVYEMAAHKPAFKALDMQALINKINKSLVAPLPTMYSGSFRGLVKSMLR KNPELRPSAAELLNHPHLQPYILKVHIKLNSPRRSTFPFQWADSNYARRTRFVEPASFSTLSVSDRGKRLSFSNDRALNP SISGTEQGSLCSTQRAQGFSACSKDKHYEQSVGCVSEECNMPRMRTAKESATPRRHTIPSKIPRISSKYDSLPASYTPAG KLTPPTRRASLPLPTTTMATTTPYRTSVGFLRSVDSPNISVNAPRIDKMAEFPLASGENIPLFPARRASSTSAQCSSGSP RSIIDCTITKDKCTIQVVDKASVPTSGSDGGAAVSHSNECSEHVATAVSSRSHSSSAESCQRRFDTSSYQQRAEALEGLL EFSARLLQQQRFEELGVLLKPFGQEKVSPRETAIWLTKSFKETVV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 604 | 604 | 0.0 | – | |
SUPERFAMILY | 1 | 316 | 316 | 2.43E-82 | ||
PANTHER | 1 | 604 | 604 | 0.0 | – | |
Gene3D | 1 | 83 | 83 | 3.0E-21 | – | |
CDD | 3 | 258 | 256 | 7.87857E-136 | – | |
ProSiteProfiles | 4 | 258 | 255 | 44.951 | ||
SMART | 4 | 258 | 255 | 2.9E-82 | ||
Pfam | 4 | 257 | 254 | 2.5E-63 | ||
ProSitePatterns | 10 | 33 | 24 | - | ||
Gene3D | 84 | 273 | 190 | 5.5E-57 | – | |
ProSitePatterns | 125 | 137 | 13 | - | ||
MobiDBLite | 395 | 419 | 25 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0170500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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