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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0231900 |
| Transcript ID | LotjaGi5g1v0231900.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Agenet domain-containing protein, putative; TAIR: AT1G09320.1 agenet domain-containing protein; Swiss-Prot: sp|Q9FZD9|DUF3_ARATH DUF724 domain-containing protein 3; TrEMBL-Plants: tr|A0A1J7GLB7|A0A1J7GLB7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0231900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:53935298..53939302) extracted from Lotus japonicus Gifu genome v1.2.
TCAAATTCCCGCCAACACAACACACAGACACAGACACAGGTGCGTGCGTGCGTGAAACCCTAATCCGATGGCACCCAAAT CTGCCACCGCCGTCTCGCCCTTCCTGAAACCCGGTACCGCGGTGGAAGTCTGTTCCGAAGACGACGGTTTCCGCGGCTCC TGGTTCACCGGCAAGATCGTCCGCCGTCTCGCCAATAACAAGGTCTCGGTGGAGTATGATAGCCTGACTGAGGACGACGA AGGCACCAAGCCCTTGAAAGAAACCCTGCACATTCGCCAGCTCCGGCCACTCCCCTTGCCGGAGACTCAACATGAGTTCA AATTCGGCGACGAGGTGGACGCTTACCACAACGACGGGTGGTGGGAGGGTCATATAACTGAGGAATTAGGGAATGGTAGG TTCGCTGTGTATTTCAGAGTCTCCAAGGAGCGGATCGAGTTTCCGAAAGAGGAGCTGAGGACTCACCGTGAATGGATTGA TGACCATTGGGATCCGCCGTTCGAATTGCCGAAGCAGGAGGAGCAGGTATGCTTCTGTGTTGATTTTAGTTGAATTTTGT TATGATTTGTTGAATTAGGAGGATTTTAGGGTTAAATTGTATGGCTTAGGATGTTGCTGATTGTAAATTTGTAATGCTGT TAATTAATTTAATAGGTGAATGAATCGAACAAGGTGTTGTTGACACCGAATGCGAAGTCTGAGGAAGCTGTGAACAAGGT GTTGTTGACACCGAAAGCGAAGTCTGTGGAAGCTGTGAACAAGGTGTTGTTGACACCAAATGTGGAGTCTGAGGAAGCTG TGAACAAGGTGTTGTTGACACCAAATGTGGAGTCTGAGGAAGCTGTGAAGCTGAAGAAGAAGGAGGAGTTGTTTTGCGTG GGGGCGTTGGTTGAGGTTAGCAGTGACGAAGAGGGTTTCCAAGGGGCTTGGTTTTCTGCCACCATTGTCGAGGTTATGGA ACAGGAGAAGTTCCTGGTTGAGTACCATAACCTGACTGATGACGATGGCCAACTTCTGAGAGAGGAGATTGATTCCCTGC ACATAAGGCCTCCTCCTCCGCCAGAAAATGGTGTTGTTGCTCAATTTAGTCGTCTTGACGAAGTTGATGCTCTGCACAAT GACGGCTGGTGGGTCGGTGTGATTTCTAAGGTTCTTGGTGACTCCAAGTATATAGTTTACTTCAGGGGCACCAATGAAGA ATTGGAGTTTCAGCAATCCGAGTTGAGGGTGCATCAGGACTTCATTGGTGGCAAATGGGTTATGGCTAAGGTATATGACT GCATTGGTTTTTAGTTTTCGAGTAAGCACATTTGAACTTCCCCTTAATAACTAGTCTTTATTTACATAGCAACATATATA GTCAAAATAGTCCCCTAATTGGGATTGGCTTCAAGCATTCAATCCTCTTCTTGTAATCTACTATTTAGTTTAAATTTTTG TTACTGAACCCCAGCTATCAAGGCAGTTCAAACAACGATTTCTGAAACGAGTTACATTTTTCTTCAAAGAATTGAATTTG AGTCTTGACAGTTTGTGAATCTCTAACCTTCAATTCTTGTCCTGTCTGTTTTGTTGACTTGATTGTGAGTGACTGTACGG CGTGGCTGTGCGTGGAAAATTGACCCTAACGCTCAAGTCTTTCTTTGAGAGAGTTTGAGTGATCTTAAAGGAAGTGAAGG GGAAAAACTTGAAACTAACTTAGCTTAGTAGGATCATGGGAGAGTGGAGGTGCCTCATTATATATTTGGGAAATCATGCT CTGATCATCCATATTTGATTGGTTGAAGTAGGAGTTCACCGCTTCTCACAATTGAGATCAATGTTTTGCTTCAGTGAACT AGATTAGAGGCTTGACAGTCCGTACTTCGTTAGCCTTCAAAACCTCAATTCCTCCATTATATGGTATGATTACTTTATAT TTAGGAGTGCATAAATGTGGATTTGCAAAAGAGGCTCTCTCACTTAAGTCATTCTTTAAGGAAGTGTTAGCAATCTTAAT AGAAGTGAAAAAAAAATGACTGGAGTGCACTTACATAGACATGCATGGAGAGAAATGTGGTTGGTATAATTGTTGAACTT AGTGGGAATGTGGGATCATGGAGAGTGTCTTAGAATTCGAGTTAGGTCTAACTTTAGGCTAAAAGCTAGCTTAGAAGTGA TGGTTGAGCTACCATTTATAAAGACTTATTTGGCCAAGAAAGTGATAAGTATAGACCCTTAGTCAAGAAGGTCTATGTTA GGAGAAAGAGGGGAGGAGCAGGGGATAATAACCCTGTAACTGACTCTAACTGACTTCATGGGGGGTTAGGATTCTGTTAG TCTGTTAGTCCCTTGTAACTGACAACTACCTACTATAAAGGGTAGTTAGCAGGGTAGTTAGAATCACTTCTGAGTTGTTA GGAAGAGTGGAGAGTCTGGTCTCTCGAATAACCAGTGGGTTCTTCTGTAGTTTGTGAGTTTCTTCTGAATCTTCTTGGAT TCAGTGTGAGTTTCAATACAATTCTTCTCAGTTTTCTTCAGAGTTTATCAGAAAGTCAGTGTGAAAGGATAGAGATTGAA GAAATTTGGAGGTACAAAAGAAAGTGAGTGTGAACGAATTGTAATTGAATAAATACTTCGGTGCCATATTCACCCTCATT CTCATTGTGAATTGAGATCATGGGGTCAGGGGAGTTCACTTAAAGTACAGGGTAAACCATAGAAGAAACAAGTCGAGTGA AAGCATAAACTTGTGCAGACTGGAAAATATCAGTCTAGCGAGCCATGCTTTCTATTTGAAAGTCACAATTGAAACTAATA AGTATGTCAAAATAGAAGTTTAGATTGGGATGCTTGTGGGTGTGGTATCAACGGTAGTGTTATGTAATGTTTAAGTAACA TCAATCAAATTATAACATGCTTAATTGCACTTTCAGCTTTTCTTGATTTTGATTCCCAACTTCTTTGTACCATAAAAATT GCATTAATTTCAAACTAAATGGATCCAAAGTTTAATTAAGTCATTACAATATTGCACACTAGTAGTTGTTTGGCATTTGT TCATGTTGTTATTGGCAACTTATTAACATTGTTGATCAGTATTTGATGTTGACTTGATGGACAAGGCTCTTAAAAAATAT TGTGTTGTGATTTTAATTCATTAATATTTAAAAACAAATAAACTTTTACTTGCTTGTTTTATATTAACTCGTCACACAAG ATTCTCTTCCTTTATATGTGAGAGTATATTGTAAAGACAGCTTCTAGTCTATTAAGTGCAGTACTGAGCCGGTTACAAGT TTTAACTGATTCAGTTATTGACTCAGCTAGATAACTTAGATTCACTGGGGTATAAACCTTGTATCTCTACAGTTTCTCAC GTAATGGAAATTACACATTTCACTCCGTCTTCTGTTTTCTCTTTCCTTCTCTTTCTCTAACTCTATCAATATGACATTCT CTTTAAACCTTGTAATCTCGACTCTTAAGCATGCAAAAATATTTTGTTTTGAAGATAGTAATCTGGAAATCATTATTGGT TTCAGGTTGTTCAGGCGCGTTGAAGTTGCGAACGCCAAAGATAGCAAGAGAAAGAAGAAGAAACTCTGTTTTGGTCTAGC TAGTTGCCACGGTTGTGAATAATTGCAAAGAGAATAGAACTCCTGTATAGTTTAAAACTTGAACTCATCTTTGCTATGCT AATGGTCATTGTAGGTTGCAGATCAAGTATAGCTTAGCATTTTTAAGGCTGGACCTTGATTTTAGTTTCATTACATCATG CTATGGAATTGCAACTTGTGCTTTTAGCTATGCGAGTAGTATTTCATTTTGTTTGGTTTTTTACTGGAAATCCCCACATA CGGAAGTGTGTGTTTAACCCTCAAACCGATGATGATGGAGATAAAGCCCTCCTTGGAATAGTGACTTCGAATTCAGGTCC TTGACATTGCAGGTACAGTTTACGTGAGTTTTTCCCATTTGCCAATGTGACTTTGAATGAGAAAGCAAGGGCTTTTGTAC CCAAA
CDS sequence (LotjaGi5g1v0231900.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCCAAATCTGCCACCGCCGTCTCGCCCTTCCTGAAACCCGGTACCGCGGTGGAAGTCTGTTCCGAAGACGACGG TTTCCGCGGCTCCTGGTTCACCGGCAAGATCGTCCGCCGTCTCGCCAATAACAAGGTCTCGGTGGAGTATGATAGCCTGA CTGAGGACGACGAAGGCACCAAGCCCTTGAAAGAAACCCTGCACATTCGCCAGCTCCGGCCACTCCCCTTGCCGGAGACT CAACATGAGTTCAAATTCGGCGACGAGGTGGACGCTTACCACAACGACGGGTGGTGGGAGGGTCATATAACTGAGGAATT AGGGAATGGTAGGTTCGCTGTGTATTTCAGAGTCTCCAAGGAGCGGATCGAGTTTCCGAAAGAGGAGCTGAGGACTCACC GTGAATGGATTGATGACCATTGGGATCCGCCGTTCGAATTGCCGAAGCAGGAGGAGCAGGTGAATGAATCGAACAAGGTG TTGTTGACACCGAATGCGAAGTCTGAGGAAGCTGTGAACAAGGTGTTGTTGACACCGAAAGCGAAGTCTGTGGAAGCTGT GAACAAGGTGTTGTTGACACCAAATGTGGAGTCTGAGGAAGCTGTGAACAAGGTGTTGTTGACACCAAATGTGGAGTCTG AGGAAGCTGTGAAGCTGAAGAAGAAGGAGGAGTTGTTTTGCGTGGGGGCGTTGGTTGAGGTTAGCAGTGACGAAGAGGGT TTCCAAGGGGCTTGGTTTTCTGCCACCATTGTCGAGGTTATGGAACAGGAGAAGTTCCTGGTTGAGTACCATAACCTGAC TGATGACGATGGCCAACTTCTGAGAGAGGAGATTGATTCCCTGCACATAAGGCCTCCTCCTCCGCCAGAAAATGGTGTTG TTGCTCAATTTAGTCGTCTTGACGAAGTTGATGCTCTGCACAATGACGGCTGGTGGGTCGGTGTGATTTCTAAGGTTCTT GGTGACTCCAAGTATATAGTTTACTTCAGGGGCACCAATGAAGAATTGGAGTTTCAGCAATCCGAGTTGAGGGTGCATCA GGACTTCATTGGTGGCAAATGGGTTATGGCTAAGGTATATGACTGCATTGGTTTTTAG
Protein sequence (LotjaGi5g1v0231900.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPKSATAVSPFLKPGTAVEVCSEDDGFRGSWFTGKIVRRLANNKVSVEYDSLTEDDEGTKPLKETLHIRQLRPLPLPET QHEFKFGDEVDAYHNDGWWEGHITEELGNGRFAVYFRVSKERIEFPKEELRTHREWIDDHWDPPFELPKQEEQVNESNKV LLTPNAKSEEAVNKVLLTPKAKSVEAVNKVLLTPNVESEEAVNKVLLTPNVESEEAVKLKKKEELFCVGALVEVSSDEEG FQGAWFSATIVEVMEQEKFLVEYHNLTDDDGQLLREEIDSLHIRPPPPPENGVVAQFSRLDEVDALHNDGWWVGVISKVL GDSKYIVYFRGTNEELEFQQSELRVHQDFIGGKWVMAKVYDCIGF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SMART | 11 | 80 | 70 | 6.4E-17 | ||
| PANTHER | 12 | 174 | 163 | 1.8E-93 | – | |
| PANTHER | 12 | 174 | 163 | 1.8E-93 | – | |
| Pfam | 16 | 76 | 61 | 1.1E-19 | ||
| SMART | 82 | 138 | 57 | 1.2E-14 | ||
| PANTHER | 223 | 358 | 136 | 1.8E-93 | – | |
| PANTHER | 223 | 358 | 136 | 1.8E-93 | – | |
| SMART | 224 | 291 | 68 | 3.2E-14 | ||
| Pfam | 229 | 288 | 60 | 3.6E-19 | ||
| SMART | 295 | 351 | 57 | 1.7E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0231900.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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