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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0261700 |
| Transcript ID | LotjaGi5g1v0261700.3 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier; TAIR: AT4G03115.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|B0G143|UCPB_DICDI Mitochondrial substrate carrier family protein ucpB; TrEMBL-Plants: tr|A0A0S3SS56|A0A0S3SS56_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0261700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57033744..57038091) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCTTTCTGTCTTTGTTCACCAATCACCTGACATGGTTATGAATCGGAAATAAGAGAGAGATCTGGTCTCGAGAAAGC ATAGGTAGAAGAAGAATGTCTGAGAATTCTACTCCTTCCAATAACTCAGCACTTTCAGGTCGCGCTTTCTTCATTTTCCT TCTCCCATTTCCACGGGATAACAAAAAAATGATTCGTTTTGCTGCATCATGACATGACAGGACCCGGCAAGCAGAACTGG GCTGCGTCTCCTTCAACAATTTTCAACCACTTCGCCACCAGTGGACTTTCCGTCGCAGTTGCAACTTCAATCACTCACCC TCTAGGTTCCTCTTCCGGGATCCCTCCTATAAATAAATACTTCCATTTTGGTTTCCTGTTTTCTTTGTGTTTGCAATTTC ATTTGCTTTTATTGCAAAATGACAACAGGGAAATTATCTATTTAGGACAAATTATTGTCTGCAGTATATGCAAATTAGAC CAAGTATATATATGGTATTGATTTTGTCTGTTGATGGTCAAATTAGCTGGTGATGTTTATATGAGATCAAGTCCTTTATA TGTTGAGAGGAAACTGTTATATTTAATTTGGTTTTTGGAGAAACCAAAAGCAAATATTAAATATATCCACATAACTTGTT TCTACTTGTAGTGCAGATGTATTGAAAGTAAGGCTGCAAATGCAACTTGTTGGCCAGAAAGGTCCTTTGACTGGAATGGT AGTTTGCTTAGTTCAACTTTTCCTCTCTTGACCTCAGTTGTCACATTATAGCACAAAGTTTTTGCTGCAGACACACAAAG TCAATTAAGCATTGTTTTCAGGGACAAATATTTTTAAATGTCATGAAGAATGAAGGACCAAAGTCTTTATATCTGGGTTT GACACCTGCATTAACAAGGTCAGTTGTTTATGGAGGACTACGCTTGGGTTTGTATGAACCCTCTAAGCATGCCTGTGATA TTGCTTTTGGCTCCTCCAATGTTTTAGTTAAAATTGCTTCGGGAATGTTTGCTGGGGCTATTTCAACTGCGCTGACGAAT CCAATGGAAGTTCTCAAGGTGAGGTATCATATCCTTTTCTACTAATTTAAATATACTTTTTTTCTTTTGTTTATTCAAAA CCATATTGCCACGATCAGGTGCGTCTGCAAATGAATCCAGACATGAGAAAGAGCGGACCGATTTTAGAGCTTCGAAGGAC TGTATCTGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGGCCCTGCCATGGCCAGAGCAGGTGCCTTGACTGCATCCC AGTTGGCTACATATGATGAAACTAAGCAGGTCAACTTTTAAAATGTATCTTTTCATCTCTTCCTCTTACCCCTAATTTAT TTTTGTCTTTACTGTCAATTTATCATTTCTTGTGCTTTATCCTTATGTAGATTTTAGTCCGGTGGACATCTCTTAAAGAA GGATTTCATCTACATTTGATGTACGGCTCTACTCTCTGTTTTATTTGCATAAAATATATTGAACTGAAACAATGTTTTAC CAGATTGGCACACCATACAAGTACAGTTCTGGACTAATTCAAACTTACACCATCACAATTTATCATTTTTTTAAGATCAA AATCATTCCCCATTATCTGACCCAACTGAACTAATTGTAGTTTGTACCTTGTAGCTCAAGCACAGTTGCAGGCATACTGA GCACCCTCATAACAGCACCCATGGATATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTGCTAGAATCTAT AAAAATGGATTTCAATGTGCATACCAGGTATTAATGTTGTTTTTTCATCTCCCAAACCTGCAGTACTTTTTTTCTCCTTT TATACCAGTCTTCTGCTTCTTTATCCACTTAGACAGTTTCCATCGTTGCCCAACAGAGATTTACTTATCATTATTCATAC TTTTTTGATGAACTTTTGGCTGAAGTCTGTGACAATGTCAAGTAAAGAGGCATTGAAATGTGATGATAAGTAATACCAAG ATTTTAGCAGAGTTTAAAACACAGCTCAACTTTGGAAAAGAAAAGGGTGTTGCTTATTAAACCAGTGTTCTATCTTCTTT GGAAAAAATTTCTGACCTTTAAGTGGTAGGTGCATTGAATTAAATTGATCTAGGAAACAATATTTTCTGACCAGTATTTA GTGGAGGCAGTTTGGACTTTGGACAAAATTTTCAACAATGCTTGTATAATAAGAAAAAATCAGATAATCTTGCAATGACT ATGAGTCTTTTAAATAACAGTTTCTCACATAAGTTGAAATTTGTTTCTGCACCTCAATTTTTTCAGAAGCTCCCCCCTCT AACTTCTCCAAAACCACGTACAAATTTCAAAGCTTTTTTTGGAATTTAAGAACCAACTACTAATCTCAATTAAGAAGCTC GTATAAGCTAAGCTAATCCAAACTGGGTCTGAAATTGTAAGAGTTTGGAAGTATTGAAAGCACTTGACCTTTAAATGAAT TTGTTCATATGGTTGAGTATATCTAGGCTTCTATTAACCTTATTCCTGTGAGATAAATGCTTCAATTTTAATATGATTGT GCTGCTTTCATAAATGTTAACAAGGACTTTTTATGCCAGCACATTGGAATCCTGGAAAGTCTTAGTTTTGTTGAACTTAT CTTACTTTGAAAGGTTGACTTTATTTGATAACTTGGTACTCTGCCATATATGTTCTATGCTTCTACTTTCCTGCATTCCT TGAGTCAGCTTGGCTTTGCTGATTCTTGTTTGTGGAGAATCACGATGTGCAGGCAGATTATTTAATGATACCTGAAGGGC CTAACTCCTAAGATAAACGATTGCATTGTATTTTGATTAACAAAATTCTTAGCCTCCTTCTATGTGTATAATGAAGAACA GAACATAATTTGAGAAAGACAGTGTGTCAGTGTCATTGGAGTTGTTTCCAAACAATAAAAAGAAAAAGAAGCCCTAAGGA GTTTCTCTTTCTCTTCTTTCCCCTTTCTCTGAAGGTGAAATTATTCAGTTTATTAGCTTATAAATTAATGAAATGATTTT CACATACTCAAACCTGAAACAATTCTAAATTTATTTTATGGCATTCCATTCACTATGAATTCCTTTTGTTATTTAATGCA TTTTGTATGTGTGGTTTCAGGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGTAAGTTTATGTTGGTTAGCAT TCTTGCATGGAACTTATTTGTTTTACATCATCTCGAAAGAGGTTTGGTGACACTTCTTAAAAATTATTACAAATCACAGC TACTGTCTCTATTATTGAAACATAGATTGTCACTTAAGATAGAATGTTTTCAGGTTTTAATTGGGAAATTTTTACGTAGT TTATACATCAACATGTAGTCAAGCCTAATCCGACTCCGCCCTAAGGCCTGATCAAAGCATGTCATTTTGATATATGAGAG GGGTTTGATGAATAAAGTCAAAATGTATTAACTTGTCATGCCATGTGTAATACCGTGTGGTAAAGAAGCCCTAAGTTTTT TGTTTTTTTGTTTTGCTTTGTTTTACTTGGAGATGAGGTGCTATCAGAAGCACATATAAACTCAACCTGCTTCTGTTTTT CTTTGGGGCTGGGAGCATGCATAATTTTGTTTGCATTGCATATTAATTAATTTATGTGGTACCTTTTGTCAGGGGCTTTG CAATATTTGCAAGATTAGGGCCACAAACCACAATTACATTTATATTATGTGAGGAGCTAAGGAAACATGCTGGATTGGAG GCAATCTAGTTACAGGAGCCTCCACCAACTAGGCTAGTGCCTACACCAACTGACTAAATATTGATTCTTGAAGTGCTGAG GAACTACTGTAAACAAGGCCTGACTGGGTGAATTCTTGTAGATAGTTATTCTCTTTTCGCAATGGTGATTTAATGCATTC CCCAGAATACCAGATCGCATTTTCGCAACTATGCAAACGGTAGTAAAAGATTCATCTATCCAAGCATCTGGTTGTCATGT TTTTCTGCTTATTTCCCATTTCATGGAGTGTCTATTTGTACTTAAATGGAAGGAGTACATACTCTTGTAGCACTGTAAGT TTTTCCAGTGGCGCTGACCAGTTAGAGCTCCACAATTGAATTAAGTAGAAAAAATAAAATGGGTCCCCTCTAACCCAAAG GAAAAAGAAAAGGAAGGGACCAGTCATTTGTTGGTTTTAACCATAAGTATCATAGGCAATCTTATTCGACCCATGTGTGG GAAAGGTAATTTGATATCAAGATTTATTTTCTCTCTCGAGTAGTGCTTCCTTTGAGAGAAAATATTACCATTTCTTTTCT GTTGTTGTATTATGTTTCAAGGTTTCGT
CDS sequence (LotjaGi5g1v0261700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGCTGGGGCTATTTCAACTGCGCTGACGAATCCAATGGAAGTTCTCAAGGTGCGTCTGCAAATGAATCCAGACAT GAGAAAGAGCGGACCGATTTTAGAGCTTCGAAGGACTGTATCTGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGGCC CTGCCATGGCCAGAGCAGGTGCCTTGACTGCATCCCAGTTGGCTACATATGATGAAACTAAGCAGATTTTAGTCCGGTGG ACATCTCTTAAAGAAGGATTTCATCTACATTTGATCTCAAGCACAGTTGCAGGCATACTGAGCACCCTCATAACAGCACC CATGGATATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTGCTAGAATCTATAAAAATGGATTTCAATGTG CATACCAGGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGGGCTTTGCAATATTTGCAAGATTAGGGCCACAA ACCACAATTACATTTATATTATGTGAGGAGCTAAGGAAACATGCTGGATTGGAGGCAATCTAG
Protein sequence (LotjaGi5g1v0261700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFAGAISTALTNPMEVLKVRLQMNPDMRKSGPILELRRTVSEEGVKALWKGVGPAMARAGALTASQLATYDETKQILVRW TSLKEGFHLHLISSTVAGILSTLITAPMDMVKTRLMLQRASTGARIYKNGFQCAYQVLLTEGPRALYKGGFAIFARLGPQ TTITFILCEELRKHAGLEAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 86 | 86 | - | – | |
| SUPERFAMILY | 1 | 170 | 170 | 1.19E-43 | ||
| Pfam | 1 | 78 | 78 | 7.5E-18 | ||
| ProSiteProfiles | 1 | 76 | 76 | 20.539 | ||
| Gene3D | 1 | 178 | 178 | 1.5E-51 | ||
| PANTHER | 1 | 174 | 174 | 8.8E-82 | – | |
| PANTHER | 1 | 174 | 174 | 8.8E-82 | – | |
| ProSiteProfiles | 85 | 174 | 90 | 24.422 | ||
| Phobius | 87 | 106 | 20 | - | – | |
| Pfam | 87 | 174 | 88 | 9.4E-19 | ||
| Phobius | 107 | 180 | 74 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0261700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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