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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0261700 |
| Transcript ID | LotjaGi5g1v0261700.5 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, expressed; TAIR: AT4G03115.5 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|B0G143|UCPB_DICDI Mitochondrial substrate carrier family protein ucpB; TrEMBL-Plants: tr|V7BG77|V7BG77_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0261700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57033803..57038022) extracted from Lotus japonicus Gifu genome v1.2.
CTCGAGAAAGCATAGGTAGAAGAAGAATGTCTGAGAATTCTACTCCTTCCAATAACTCAGCACTTTCAGGTCGCGCTTTC TTCATTTTCCTTCTCCCATTTCCACGGGATAACAAAAAAATGATTCGTTTTGCTGCATCATGACATGACAGGACCCGGCA AGCAGAACTGGGCTGCGTCTCCTTCAACAATTTTCAACCACTTCGCCACCAGTGGACTTTCCGTCGCAGTTGCAACTTCA ATCACTCACCCTCTAGGTTCCTCTTCCGGGATCCCTCCTATAAATAAATACTTCCATTTTGGTTTCCTGTTTTCTTTGTG TTTGCAATTTCATTTGCTTTTATTGCAAAATGACAACAGGGAAATTATCTATTTAGGACAAATTATTGTCTGCAGTATAT GCAAATTAGACCAAGTATATATATGGTATTGATTTTGTCTGTTGATGGTCAAATTAGCTGGTGATGTTTATATGAGATCA AGTCCTTTATATGTTGAGAGGAAACTGTTATATTTAATTTGGTTTTTGGAGAAACCAAAAGCAAATATTAAATATATCCA CATAACTTGTTTCTACTTGTAGTGCAGATGTATTGAAAGTAAGGCTGCAAATGCAACTTGTTGGCCAGAAAGGTCCTTTG ACTGGAATGGTAGTTTGCTTAGTTCAACTTTTCCTCTCTTGACCTCAGTTGTCACATTATAGCACAAAGTTTTTGCTGCA GACACACAAAGTCAATTAAGCATTGTTTTCAGGGACAAATATTTTTAAATGTCATGAAGAATGAAGGACCAAAGTCTTTA TATCTGGGTTTGACACCTGCATTAACAAGGTCAGTTGTTTATGGAGGACTACGCTTGGGTTTGTATGAACCCTCTAAGCA TGCCTGTGATATTGCTTTTGGCTCCTCCAATGTTTTAGTTAAAATTGCTTCGGGAATGTTTGCTGGGGCTATTTCAACTG CGCTGACGAATCCAATGGAAGTTCTCAAGGTGAGGTATCATATCCTTTTCTACTAATTTAAATATACTTTTTTTCTTTTG TTTATTCAAAACCATATTGCCACGATCAGGTGCGTCTGCAAATGAATCCAGACATGAGAAAGAGCGGACCGATTTTAGAG CTTCGAAGGACTGTATCTGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGGCCCTGCCATGGCCAGAGCAGGTGCCTT GACTGCATCCCAGTTGGCTACATATGATGAAACTAAGCAGGTCAACTTTTAAAATGTATCTTTTCATCTCTTCCTCTTAC CCCTAATTTATTTTTGTCTTTACTGTCAATTTATCATTTCTTGTGCTTTATCCTTATGTAGATTTTAGTCCGGTGGACAT CTCTTAAAGAAGGATTTCATCTACATTTGATGTACGGCTCTACTCTCTGTTTTATTTGCATAAAATATATTGAACTGAAA CAATGTTTTACCAGATTGGCACACCATACAAGTACAGTTCTGGACTAATTCAAACTTACACCATCACAATTTATCATTTT TTTAAGATCAAAATCATTCCCCATTATCTGACCCAACTGAACTAATTGTAGTTTGTACCTTGTAGCTCAAGCACAGTTGC AGGCATACTGAGCACCCTCATAACAGCACCCATGGATATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTG CTAGAATCTATAAAAATGGATTTCAATGTGCATACCAGGTATTAATGTTGTTTTTTCATCTCCCAAACCTGCAGTACTTT TTTTCTCCTTTTATACCAGTCTTCTGCTTCTTTATCCACTTAGACAGTTTCCATCGTTGCCCAACAGAGATTTACTTATC ATTATTCATACTTTTTTGATGAACTTTTGGCTGAAGTCTGTGACAATGTCAAGTAAAGAGGCATTGAAATGTGATGATAA GTAATACCAAGATTTTAGCAGAGTTTAAAACACAGCTCAACTTTGGAAAAGAAAAGGGTGTTGCTTATTAAACCAGTGTT CTATCTTCTTTGGAAAAAATTTCTGACCTTTAAGTGGTAGGTGCATTGAATTAAATTGATCTAGGAAACAATATTTTCTG ACCAGTATTTAGTGGAGGCAGTTTGGACTTTGGACAAAATTTTCAACAATGCTTGTATAATAAGAAAAAATCAGATAATC TTGCAATGACTATGAGTCTTTTAAATAACAGTTTCTCACATAAGTTGAAATTTGTTTCTGCACCTCAATTTTTTCAGAAG CTCCCCCCTCTAACTTCTCCAAAACCACGTACAAATTTCAAAGCTTTTTTTGGAATTTAAGAACCAACTACTAATCTCAA TTAAGAAGCTCGTATAAGCTAAGCTAATCCAAACTGGGTCTGAAATTGTAAGAGTTTGGAAGTATTGAAAGCACTTGACC TTTAAATGAATTTGTTCATATGGTTGAGTATATCTAGGCTTCTATTAACCTTATTCCTGTGAGATAAATGCTTCAATTTT AATATGATTGTGCTGCTTTCATAAATGTTAACAAGGACTTTTTATGCCAGCACATTGGAATCCTGGAAAGTCTTAGTTTT GTTGAACTTATCTTACTTTGAAAGGTTGACTTTATTTGATAACTTGGTACTCTGCCATATATGTTCTATGCTTCTACTTT CCTGCATTCCTTGAGTCAGCTTGGCTTTGCTGATTCTTGTTTGTGGAGAATCACGATGTGCAGGCAGATTATTTAATGAT ACCTGAAGGGCCTAACTCCTAAGATAAACGATTGCATTGTATTTTGATTAACAAAATTCTTAGCCTCCTTCTATGTGTAT AATGAAGAACAGAACATAATTTGAGAAAGACAGTGTGTCAGTGTCATTGGAGTTGTTTCCAAACAATAAAAAGAAAAAGA AGCCCTAAGGAGTTTCTCTTTCTCTTCTTTCCCCTTTCTCTGAAGGTGAAATTATTCAGTTTATTAGCTTATAAATTAAT GAAATGATTTTCACATACTCAAACCTGAAACAATTCTAAATTTATTTTATGGCATTCCATTCACTATGAATTCCTTTTGT TATTTAATGCATTTTGTATGTGTGGTTTCAGGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGTAAGTTTATG TTGGTTAGCATTCTTGCATGGAACTTATTTGTTTTACATCATCTCGAAAGAGGTTTGGTGACACTTCTTAAAAATTATTA CAAATCACAGCTACTGTCTCTATTATTGAAACATAGATTGTCACTTAAGATAGAATGTTTTCAGGTTTTAATTGGGAAAT TTTTACGTAGTTTATACATCAACATGTAGTCAAGCCTAATCCGACTCCGCCCTAAGGCCTGATCAAAGCATGTCATTTTG ATATATGAGAGGGGTTTGATGAATAAAGTCAAAATGTATTAACTTGTCATGCCATGTGTAATACCGTGTGGTAAAGAAGC CCTAAGTTTTTTGTTTTTTTGTTTTGCTTTGTTTTACTTGGAGATGAGGTGCTATCAGAAGCACATATAAACTCAACCTG CTTCTGTTTTTCTTTGGGGCTGGGAGCATGCATAATTTTGTTTGCATTGCATATTAATTAATTTATGTGGTACCTTTTGT CAGGGGCTTTGCAATATTTGCAAGATTAGGGCCACAAACCACAATTACATTTATATTATGTGAGGAGCTAAGGAAACATG CTGGATTGGAGGCAATCTAGTTACAGGAGCCTCCACCAACTAGGCTAGTGCCTACACCAACTGACTAAATATTGATTCTT GAAGTGCTGAGGAACTACTGTAAACAAGGCCTGACTGGGTGAATTCTTGTAGATAGTTATTCTCTTTTCGCAATGGTGAT TTAATGCATTCCCCAGAATACCAGATCGCATTTTCGCAACTATGCAAACGGTAGTAAAAGATTCATCTATCCAAGCATCT GGTTGTCATGTTTTTCTGCTTATTTCCCATTTCATGGAGTGTCTATTTGTACTTAAATGGAAGGAGTACATACTCTTGTA GCACTGTAAGTTTTTCCAGTGGCGCTGACCAGTTAGAGCTCCACAATTGAATTAAGTAGAAAAAATAAAATGGGTCCCCT CTAACCCAAAGGAAAAAGAAAAGGAAGGGACCAGTCATTTGTTGGTTTTAACCATAAGTATCATAGGCAATCTTATTCGA CCCATGTGTGGGAAAGGTAATTTGATATCAAGATTTATTTTCTCTCTCGAGTAGTGCTTC
CDS sequence (LotjaGi5g1v0261700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAAGAATGAAGGACCAAAGTCTTTATATCTGGGTTTGACACCTGCATTAACAAGGTCAGTTGTTTATGGAGGACTACG CTTGGGTTTGTATGAACCCTCTAAGCATGCCTGTGATATTGCTTTTGGCTCCTCCAATGTTTTAGTTAAAATTGCTTCGG GAATGTTTGCTGGGGCTATTTCAACTGCGCTGACGAATCCAATGGAAGTTCTCAAGGTGCGTCTGCAAATGAATCCAGAC ATGAGAAAGAGCGGACCGATTTTAGAGCTTCGAAGGACTGTATCTGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGG CCCTGCCATGGCCAGAGCAGGTGCCTTGACTGCATCCCAGTTGGCTACATATGATGAAACTAAGCAGATTTTAGTCCGGT GGACATCTCTTAAAGAAGGATTTCATCTACATTTGATCTCAAGCACAGTTGCAGGCATACTGAGCACCCTCATAACAGCA CCCATGGATATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTGCTAGAATCTATAAAAATGGATTTCAATG TGCATACCAGGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGGGCTTTGCAATATTTGCAAGATTAGGGCCAC AAACCACAATTACATTTATATTATGTGAGGAGCTAAGGAAACATGCTGGATTGGAGGCAATCTAG
Protein sequence (LotjaGi5g1v0261700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MKNEGPKSLYLGLTPALTRSVVYGGLRLGLYEPSKHACDIAFGSSNVLVKIASGMFAGAISTALTNPMEVLKVRLQMNPD MRKSGPILELRRTVSEEGVKALWKGVGPAMARAGALTASQLATYDETKQILVRWTSLKEGFHLHLISSTVAGILSTLITA PMDMVKTRLMLQRASTGARIYKNGFQCAYQVLLTEGPRALYKGGFAIFARLGPQTTITFILCEELRKHAGLEAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 140 | 140 | - | – | |
| Gene3D | 1 | 232 | 232 | 3.0E-66 | ||
| Pfam | 1 | 36 | 36 | 7.4E-5 | ||
| ProSiteProfiles | 1 | 37 | 37 | 11.744 | ||
| PANTHER | 1 | 228 | 228 | 7.6E-107 | – | |
| PANTHER | 1 | 228 | 228 | 7.6E-107 | – | |
| SUPERFAMILY | 2 | 224 | 223 | 7.98E-56 | ||
| Pfam | 45 | 132 | 88 | 1.2E-20 | ||
| ProSiteProfiles | 45 | 130 | 86 | 23.629 | ||
| ProSiteProfiles | 139 | 228 | 90 | 24.422 | ||
| Phobius | 141 | 160 | 20 | - | – | |
| Pfam | 141 | 228 | 88 | 1.8E-18 | ||
| Phobius | 161 | 234 | 74 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0261700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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