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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0261700 |
| Transcript ID | LotjaGi5g1v0261700.4 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial carrier protein, expressed; TAIR: AT4G03115.1 Mitochondrial substrate carrier family protein; Swiss-Prot: sp|B0G143|UCPB_DICDI Mitochondrial substrate carrier family protein ucpB; TrEMBL-Plants: tr|V7BG77|V7BG77_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0261700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57033778..57038085) extracted from Lotus japonicus Gifu genome v1.2.
TTCTGTCTTTGTTCACCAATCACCTGACATGGTTATGAATCGGAAATAAGAGAGAGATCTGGTCTCGAGAAAGCATAGGT AGAAGAAGAATGTCTGAGAATTCTACTCCTTCCAATAACTCAGCACTTTCAGGTCGCGCTTTCTTCATTTTCCTTCTCCC ATTTCCACGGGATAACAAAAAAATGATTCGTTTTGCTGCATCATGACATGACAGGACCCGGCAAGCAGAACTGGGCTGCG TCTCCTTCAACAATTTTCAACCACTTCGCCACCAGTGGACTTTCCGTCGCAGTTGCAACTTCAATCACTCACCCTCTAGG TTCCTCTTCCGGGATCCCTCCTATAAATAAATACTTCCATTTTGGTTTCCTGTTTTCTTTGTGTTTGCAATTTCATTTGC TTTTATTGCAAAATGACAACAGGGAAATTATCTATTTAGGACAAATTATTGTCTGCAGTATATGCAAATTAGACCAAGTA TATATATGGTATTGATTTTGTCTGTTGATGGTCAAATTAGCTGGTGATGTTTATATGAGATCAAGTCCTTTATATGTTGA GAGGAAACTGTTATATTTAATTTGGTTTTTGGAGAAACCAAAAGCAAATATTAAATATATCCACATAACTTGTTTCTACT TGTAGTGCAGATGTATTGAAAGTAAGGCTGCAAATGCAACTTGTTGGCCAGAAAGGTCCTTTGACTGGAATGGTAGTTTG CTTAGTTCAACTTTTCCTCTCTTGACCTCAGTTGTCACATTATAGCACAAAGTTTTTGCTGCAGACACACAAAGTCAATT AAGCATTGTTTTCAGGGACAAATATTTTTAAATGTCATGAAGAATGAAGGACCAAAGTCTTTATATCTGGGTTTGACACC TGCATTAACAAGGTCAGTTGTTTATGGAGGACTACGCTTGGGTTTGTATGAACCCTCTAAGCATGCCTGTGATATTGCTT TTGGCTCCTCCAATGTTTTAGTTAAAATTGCTTCGGGAATGTTTGCTGGGGCTATTTCAACTGCGCTGACGAATCCAATG GAAGTTCTCAAGGTGAGGTATCATATCCTTTTCTACTAATTTAAATATACTTTTTTTCTTTTGTTTATTCAAAACCATAT TGCCACGATCAGGTGCGTCTGCAAATGAATCCAGACATGAGAAAGAGCGGACCGATTTTAGAGCTTCGAAGGACTGTATC TGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGGCCCTGCCATGGCCAGAGCAGGTGCCTTGACTGCATCCCAGTTGG CTACATATGATGAAACTAAGCAGGTCAACTTTTAAAATGTATCTTTTCATCTCTTCCTCTTACCCCTAATTTATTTTTGT CTTTACTGTCAATTTATCATTTCTTGTGCTTTATCCTTATGTAGATTTTAGTCCGGTGGACATCTCTTAAAGAAGGATTT CATCTACATTTGATGTACGGCTCTACTCTCTGTTTTATTTGCATAAAATATATTGAACTGAAACAATGTTTTACCAGATT GGCACACCATACAAGTACAGTTCTGGACTAATTCAAACTTACACCATCACAATTTATCATTTTTTTAAGATCAAAATCAT TCCCCATTATCTGACCCAACTGAACTAATTGTAGTTTGTACCTTGTAGCTCAAGCACAGTTGCAGGCATACTGAGCACCC TCATAACAGCACCCATGGATATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTGCTAGAATCTATAAAAAT GGATTTCAATGTGCATACCAGGTATTAATGTTGTTTTTTCATCTCCCAAACCTGCAGTACTTTTTTTCTCCTTTTATACC AGTCTTCTGCTTCTTTATCCACTTAGACAGTTTCCATCGTTGCCCAACAGAGATTTACTTATCATTATTCATACTTTTTT GATGAACTTTTGGCTGAAGTCTGTGACAATGTCAAGTAAAGAGGCATTGAAATGTGATGATAAGTAATACCAAGATTTTA GCAGAGTTTAAAACACAGCTCAACTTTGGAAAAGAAAAGGGTGTTGCTTATTAAACCAGTGTTCTATCTTCTTTGGAAAA AATTTCTGACCTTTAAGTGGTAGGTGCATTGAATTAAATTGATCTAGGAAACAATATTTTCTGACCAGTATTTAGTGGAG GCAGTTTGGACTTTGGACAAAATTTTCAACAATGCTTGTATAATAAGAAAAAATCAGATAATCTTGCAATGACTATGAGT CTTTTAAATAACAGTTTCTCACATAAGTTGAAATTTGTTTCTGCACCTCAATTTTTTCAGAAGCTCCCCCCTCTAACTTC TCCAAAACCACGTACAAATTTCAAAGCTTTTTTTGGAATTTAAGAACCAACTACTAATCTCAATTAAGAAGCTCGTATAA GCTAAGCTAATCCAAACTGGGTCTGAAATTGTAAGAGTTTGGAAGTATTGAAAGCACTTGACCTTTAAATGAATTTGTTC ATATGGTTGAGTATATCTAGGCTTCTATTAACCTTATTCCTGTGAGATAAATGCTTCAATTTTAATATGATTGTGCTGCT TTCATAAATGTTAACAAGGACTTTTTATGCCAGCACATTGGAATCCTGGAAAGTCTTAGTTTTGTTGAACTTATCTTACT TTGAAAGGTTGACTTTATTTGATAACTTGGTACTCTGCCATATATGTTCTATGCTTCTACTTTCCTGCATTCCTTGAGTC AGCTTGGCTTTGCTGATTCTTGTTTGTGGAGAATCACGATGTGCAGGCAGATTATTTAATGATACCTGAAGGGCCTAACT CCTAAGATAAACGATTGCATTGTATTTTGATTAACAAAATTCTTAGCCTCCTTCTATGTGTATAATGAAGAACAGAACAT AATTTGAGAAAGACAGTGTGTCAGTGTCATTGGAGTTGTTTCCAAACAATAAAAAGAAAAAGAAGCCCTAAGGAGTTTCT CTTTCTCTTCTTTCCCCTTTCTCTGAAGGTGAAATTATTCAGTTTATTAGCTTATAAATTAATGAAATGATTTTCACATA CTCAAACCTGAAACAATTCTAAATTTATTTTATGGCATTCCATTCACTATGAATTCCTTTTGTTATTTAATGCATTTTGT ATGTGTGGTTTCAGGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGTAAGTTTATGTTGGTTAGCATTCTTGC ATGGAACTTATTTGTTTTACATCATCTCGAAAGAGGTTTGGTGACACTTCTTAAAAATTATTACAAATCACAGCTACTGT CTCTATTATTGAAACATAGATTGTCACTTAAGATAGAATGTTTTCAGGTTTTAATTGGGAAATTTTTACGTAGTTTATAC ATCAACATGTAGTCAAGCCTAATCCGACTCCGCCCTAAGGCCTGATCAAAGCATGTCATTTTGATATATGAGAGGGGTTT GATGAATAAAGTCAAAATGTATTAACTTGTCATGCCATGTGTAATACCGTGTGGTAAAGAAGCCCTAAGTTTTTTGTTTT TTTGTTTTGCTTTGTTTTACTTGGAGATGAGGTGCTATCAGAAGCACATATAAACTCAACCTGCTTCTGTTTTTCTTTGG GGCTGGGAGCATGCATAATTTTGTTTGCATTGCATATTAATTAATTTATGTGGTACCTTTTGTCAGGGGCTTTGCAATAT TTGCAAGATTAGGGCCACAAACCACAATTACATTTATATTATGTGAGGAGCTAAGGAAACATGCTGGATTGGAGGCAATC TAGTTACAGGAGCCTCCACCAACTAGGCTAGTGCCTACACCAACTGACTAAATATTGATTCTTGAAGTGCTGAGGAACTA CTGTAAACAAGGCCTGACTGGGTGAATTCTTGTAGATAGTTATTCTCTTTTCGCAATGGTGATTTAATGCATTCCCCAGA ATACCAGATCGCATTTTCGCAACTATGCAAACGGTAGTAAAAGATTCATCTATCCAAGCATCTGGTTGTCATGTTTTTCT GCTTATTTCCCATTTCATGGAGTGTCTATTTGTACTTAAATGGAAGGAGTACATACTCTTGTAGCACTGTAAGTTTTTCC AGTGGCGCTGACCAGTTAGAGCTCCACAATTGAATTAAGTAGAAAAAATAAAATGGGTCCCCTCTAACCCAAAGGAAAAA GAAAAGGAAGGGACCAGTCATTTGTTGGTTTTAACCATAAGTATCATAGGCAATCTTATTCGACCCATGTGTGGGAAAGG TAATTTGATATCAAGATTTATTTTCTCTCTCGAGTAGTGCTTCCTTTGAGAGAAAATATTACCATTTC
CDS sequence (LotjaGi5g1v0261700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGAGAATTCTACTCCTTCCAATAACTCAGCACTTTCAGGACCCGGCAAGCAGAACTGGGCTGCGTCTCCTTCAAC AATTTTCAACCACTTCGCCACCAGTGGACTTTCCGTCGCAGTTGCAACTTCAATCACTCACCCTCTAGATGTATTGAAAG TAAGGCTGCAAATGCAACTTGTTGGCCAGAAAGGTCCTTTGACTGGAATGGGACAAATATTTTTAAATGTCATGAAGAAT GAAGGACCAAAGTCTTTATATCTGGGTTTGACACCTGCATTAACAAGGTCAGTTGTTTATGGAGGACTACGCTTGGGTTT GTATGAACCCTCTAAGCATGCCTGTGATATTGCTTTTGGCTCCTCCAATGTTTTAGTTAAAATTGCTTCGGGAATGTTTG CTGGGGCTATTTCAACTGCGCTGACGAATCCAATGGAAGTTCTCAAGGTGCGTCTGCAAATGAATCCAGACATGAGAAAG AGCGGACCGATTTTAGAGCTTCGAAGGACTGTATCTGAAGAGGGAGTCAAAGCTCTGTGGAAGGGAGTGGGCCCTGCCAT GGCCAGAGCAGGTGCCTTGACTGCATCCCAGTTGGCTACATATGATGAAACTAAGCAGATTTTAGTCCGGTGGACATCTC TTAAAGAAGGATTTCATCTACATTTGATCTCAAGCACAGTTGCAGGCATACTGAGCACCCTCATAACAGCACCCATGGAT ATGGTTAAAACACGTCTCATGTTGCAACGAGCATCCACGGGTGCTAGAATCTATAAAAATGGATTTCAATGTGCATACCA GGTCCTTCTTACAGAGGGCCCAAGGGCACTTTACAAAGGGGGCTTTGCAATATTTGCAAGATTAGGGCCACAAACCACAA TTACATTTATATTATGTGAGGAGCTAAGGAAACATGCTGGATTGGAGGCAATCTAG
Protein sequence (LotjaGi5g1v0261700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSENSTPSNNSALSGPGKQNWAASPSTIFNHFATSGLSVAVATSITHPLDVLKVRLQMQLVGQKGPLTGMGQIFLNVMKN EGPKSLYLGLTPALTRSVVYGGLRLGLYEPSKHACDIAFGSSNVLVKIASGMFAGAISTALTNPMEVLKVRLQMNPDMRK SGPILELRRTVSEEGVKALWKGVGPAMARAGALTASQLATYDETKQILVRWTSLKEGFHLHLISSTVAGILSTLITAPMD MVKTRLMLQRASTGARIYKNGFQCAYQVLLTEGPRALYKGGFAIFARLGPQTTITFILCEELRKHAGLEAI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 217 | 217 | - | – | |
| PANTHER | 19 | 305 | 287 | 7.2E-132 | – | |
| PANTHER | 19 | 305 | 287 | 7.2E-132 | – | |
| Pfam | 26 | 113 | 88 | 3.9E-19 | ||
| ProSiteProfiles | 26 | 114 | 89 | 21.119 | ||
| SUPERFAMILY | 27 | 301 | 275 | 2.88E-69 | ||
| Gene3D | 29 | 309 | 281 | 4.8E-78 | ||
| PRINTS | 31 | 44 | 14 | 3.0E-6 | ||
| PRINTS | 44 | 58 | 15 | 3.0E-6 | ||
| ProSiteProfiles | 122 | 207 | 86 | 23.629 | ||
| Pfam | 122 | 209 | 88 | 2.2E-20 | ||
| PRINTS | 137 | 155 | 19 | 3.0E-6 | ||
| ProSiteProfiles | 216 | 305 | 90 | 24.422 | ||
| Pfam | 218 | 305 | 88 | 3.1E-18 | ||
| Phobius | 218 | 237 | 20 | - | – | |
| PRINTS | 225 | 247 | 23 | 3.0E-6 | ||
| Phobius | 238 | 311 | 74 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP transmembrane transporter activity | Enables the transfer of ATP, adenosine triphosphate, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0261700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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