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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0286900 |
| Transcript ID | LotjaGi5g1v0286900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aquaporin-1; TAIR: AT4G10380.1 NOD26-like intrinsic protein 5;1; Swiss-Prot: sp|Q9SV84|NIP51_ARATH Probable aquaporin NIP5-1; TrEMBL-Plants: tr|A9YTW6|A9YTW6_LOTJA Major intrinsic protein NIP5;1; Found in the gene: LotjaGi5g1v0286900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60354236..60362784) extracted from Lotus japonicus Gifu genome v1.2.
CACAAAATAGTGTAAGAACACAATTTTAAGAACCTAAAGATGGATAGAAATACTTTGATAGTATTTCTAACTCGAATAAT TGTCAATACCTGTATTACACCATTAAATAAGTATTTAAAAGCAATAATGCAATGCCTTTGACTTTCCCAGAGATAATTAA TATCATAAAATGGTGTAGAGTTCGCGTATTGTGGTAGCAACTCACCGACGCCAGTGCTTTCTTTCTTTTCTATGATGAGC ACGTTCCAAACTCATTTTATAATCAAACCCCAACTCACTTCTTCTCCATGATCTTCCTCAATTGTTAATCCTCACTTTCC CGACCATTCGCCGCTACCTCCACCTTCAACAACAACAACAAACGCTTTTCCTTTCTTTTTGTTTCTTTCTTTCTTTTTCT TTCTCTGTGTTTTCTCCATCTTCGAAATTGGATCACAACCATCCCCACAAGTTTTCTCCGATTCCATTACTCCAACCTCT TCAAAAACCCACACATGCTCCTCCATTTCCCAATCTCAATCGCAATTTCATAGCTAGCTTCTAAGTTTCCCAATCTGGGT CCGTTCTTCTCTTCCTCCATTCCTTAAACACACATCAATAAAAACCATCCAATTATGTAACTGTACCTCTTAGCACCTTC AAACCCCCCAACAAAAAAACCCAAAAAAATTTTGTTTCTCCTTACATTGCAAAAAATTATGTAGTGTGTCAATATTCACT ATTCTATCCAATTGCTTGAATTATTGTTAGTTCTATTTCTATTTATAAAATTTGAAGAAAAAAAAAAATGCCACCAGCTG TGGAAGAAACTGAGATTGGGACTCCAACATCGATGCCGGCTACTCCAGAAACACCGGGAGGGCCGCTGTTCACGTCGCTC CGAATCGACTCGCTGGACGCTCGCGGGTCGTTCACGGGGCCTCGGTGCATGTGTCTGCCGCCGAAGGCTCATACGTGCTT GACTGATTTCTCTGCTGGTATTGGGATTGGAATTCCGAGTGTGCCTCTTACTCAAAAGGTACTAACTACTAACAACCCTT CTCTCTTTCTTTCTGCTTTGAGTCAACGAATTTTGCTGTATTTTTTAGCATATATTTTTTCTTACACCGCCCATGAATTA ATGGCATTTTGATATGACGATAGCATTGTCATAGTTATTTAATGTGTTACGATACCGATGAGATGTGGTTTTTCATAAAA TAATGCAACTATGAGGTTTTTCATCCGTCGTATATGATCTTTTATGGGGAATGTTCAATGCTCACAACTTGCTTGATGTG GAAATGAGTAATGATATATAAACATCTCATTATTTATACACTTTATTTTCACATATTTTTATTTCTATCTCTCCTTTTAT CATCTATTACATCTTATACTTTCTTTCTCTTACTTTTTCTTTTCTTCCTATCTCTCTCATTCTCCACCTCTTTCCACCTC AATTTAGAGGTGTGTACAAATAATTATTGTTGTGGAAATAGATGATTCTAATAAATACAGGTTAAACGTGATTATTCATT GTTAAATACTTAGATTAGATATATATTAATCAAATACTATTAAAATAGTTTGTTTTATATTTATTAGCTGTTGTAATATA GGGGTTTAGATTTGTTTTTTATTAATTGCTGGCAGCAAAATTCTAATTACCCCATTTTTGAGAATGTTTTTTGTCTCATG CACTCAACTTATAGTGGATGTTAAAATTCATATTGTTTGTTCATAACAAAACAAGACAACAACCGCAAAGCGGTAGACAT TCGGCTATAGTTGCATGTGAACCTGAGTCAAATCATAGCCTTTCACGTTTGGAAGTTCTTGCTGAATTTCTCATATGACA ACCCGAGTCAAATCATAGCCATTCACCTTAGAACACCTTAGAATAATGTTTCATAGAGTCATAGTGTACGAATTTTATCA GGCCAGATTACTAAGTGTCTCATATAGTCTGTATATATATGTACCCTACACAAAATATTTGAACTAATATTATTTGATTC TAGGTCGACATATTTAGCTATTGAGTTTGGCTTACTGGTTAACTTATATTTTAGGCATAATTGCAAATTTGATACCTCTA GTTTGGACTTTGTATGATTTTGATTATTTTCAAGTTAATTAAGTCTCTATACTTTAAAAATAAGAAAAAATGGTCCTTTT CTTAATTTTCATGCAGAAGAAATTTCTTTTTTGACAGTGTATTGTCTTTACAAATACAAAGAAATTCTTTAATCTTCATT TTCTATTAAGCTATTTTGGGTCTACGATAGATTGATGAAATAATGTAAATTCAACGTGTTAAGTAAAAATCCCAGTGAAA ATGTTCTAAAATTTGAAAAATTTATAGAATATGAGATTAGAGTTTTTTTTTAACGTGTATATGAGATTAGAGTTTTTTTT TGTGCTAAGGAATTAAAAAACAAACACGAAAAGAAACAAAGCAAATTAGCTAGATATTTAATCATTTTAATTGTTAGATT TTGAGTGAAATAAGATTTACAGTGATTTTTTAAAAAAAGCAAAATTTTTTTTGATAAAATTAAAGAAGAAAATGTACACT GTCTTTCTCAAAAGGATAGCGAAATCCTAAAGAACTAAAAAAGAATGACAACCCAACTAAACACCTTCAAAGGGCAGAAG ATACAAACCCCAAAATTCCAACAAACAAACAGACCAGTCAAACCCCAGAAAGCAGCAACTAAGAGAGCTAAAAACAAATA AAACCATAAGTAGCTAGCAAGTGAACCCCCTACTCGACCTCCTCTGCTTTCCTCTTTCCCTAAGAAGACCTGCACGCATT AATCTATGCAATAATTTTGTTCAGAGCAATATCATTTGTACATTCATATGCCATGTCTAAATATTTCCCCATCAAGTATA CTCATCTTCCTAGTCAGCACACCTTGTGGCTATGAGGATTTTGTTGGCAAAAACATCAACTGATTCTCTTTGCTTGCCTC CTCTACAGTCGCGCCCTCGCTCCGCTAAAAAATCATTTGGGGAGATATCACATAGAAAATTAGAATTTGACAATTTTAAT TAGAATAATAGTGATTGGGAGCTTAATTATTTTGATTTTAATTATTGTGTGATTAAAAATTTTAAAACAAATTATAGGAC GACCAAAATCCATAGAAAGACTAAAAATATAATTAAGTCTATATTTTATTTATATATTTATAAAATTGTAGTGTAGAAAA TGTTAATTTTATATATTTACTCAATAAATTGTTTTACAATTTCAAATTAAATTATATTTAAAATTTCAAATTTATTTCTA TTTTTTAAAATTGATTTTTTATTTAAAATAAAAAACTGTATTTAGAGTTCTAATAGGGAAAAAATTGCATGAGCTTATAG GTTGAAACCTTAGTCAAGACCAATTCTACACCGAAGACGTACATAATTAAAAATCTACTATTACTTTATTGTATAAGAGG AGTTTAAGATGATAAGAGTTTAGTAGTAATTTTATTTCAGTGACTTTAGTCTTTTTTTTTACAATGCATTTGTCCTTTTC ATATAAAATTATACAAATACCCACACCAAATAATTATAATATCATAGTAATAATAATAATGTTATTCTATAAGTTTTATG TAATCAGGTCACGTGCAACGTACCAAGAAAATAGTAAATAATAAACTAACATGAAAGTCATCAAACTTTGCTCTGTCGTA CTCCTATTAATCCAAATTAAAAAGGCAAGATTTTCAGTCTAATTTACAGTTTTAATATTCCTTTTTCCACATCACGCCCA TCCATTGGTGATGCTATTTTGCTGTATGACGTTTAATATAATTTGTCAACTTGTGAATTTTTCTAACTCTTGGTTCGTAC TACGTACGGTATCCTTTTTATAATGTCACTTATTTTTGTGCTTATTTATTTTAATTTTAATTTTTTTCTAGAAAATAACT ATTAAATTTTGAAAAAAAAAATGTATTGGGTGATCAAATTTTACAGGTTGACTGAAAATTTGTTGGCCAACTGGTCAATT TTTCGTTAATTCAATGATAAGGTCCAACGTGTATGACAAAAAAAATGTAAAGTTCAAATGCTAATGCTTTTATGTTGGGT TTTCTTTTCTAATTTGAGCTCTGATATACTCCTTCCGTTCCTAATCTTTTGTTGTTGAAGGTTATGCACATTGTTTAAGA GTGCAATCATTGATATATTTATTGACATAAACATTCTTATTTAATGTTGAGTTAAAGTGAAGAAAAAAAATTATAGTTAT TGGTTAAGAAACTTAATATGATTTTGATTTGTGAAAATAAGAGGTGGTAGGTGAGAGATATAGTAATAAATGAGGGTATG CATGGAATAAATTGAGAAAAAATGCATTGGGTTTGTAAAACAATAAAAGTTTTAGAATTTAGACAAAAAATTAAAACAAA AAAAATAAGGAACAGAGGGAGTAAAAAATAGTAAACTCCAAGTAATTAATTTGTTTTCTTGATTTTTTGAAAGACAAGTT ACAAATAGTTAATTTGTTGGAGCAAGATAAGGTTTATTAATAGACATGCAACAAGTTCACGTCTCCACACTTTTCTTTAT TTTATTGGATGATGTATTCTTTTAGTGGTGACCCCTAATGTGGACCACTTTTAAAGTGGTCTAATTTTAGACCACATTTT TTAACTTGCTATAACAGGTCAACACATTTTTTTTTAAAGAAATTTAATATATGATAAATTTTTAATGATATTTTTTCTTA AAAAAAATGTGTCAACCAGCTATACTCAGTTAAAGTAGGTGATGTAAAATTACACCACTTAAAAATGGTGCATATTAGAG TAAGTTCAATTTGGCCACTAATTAAACAAGAACGTGTAAACATAAAAGAAATTGAAGAATCACAATTCTTTTGCTAAGAT GAGTTGATATTATTATTGACTCGTAGATAGATAGATGGGTGATCCCCGCTACTTTGACATATTCATCAACTATCATTCAA TATTCATAAATGTTGCTGAAGTTTTTCTTTAAAACCATGTATTGATAAATTCTCAATTTGAAATCTTACACATAAAGTTC CACTTGTACAAGCAAAATCTTGAATAACTCTCCAACTAAAAGTACAAGGAAAAGTAAAATCTTGAATTCAATCTGCATAA ACATGATTGCAACATTATGATTTATGATATATGATCAGCATGATCCATAAGCACATATTAGAATTGGGTATTGAACTATG TTGGAACTATTGCATCTTCAAACTCTTATACTGTTAGAAGTCCCACATTGGCTAGAGATGTGGCCAACCAAATGCTTAAA AAGGGTAGAGCAACCCTCAACTCTTGAGCTAGCTTTTGGGTTGAGTTAGGCCTACATAATTCCAATATGGTATCAGATCC TATCCTAGATCCATTTGTTCTGTGGAGACCTCCCGTATTTGAGCCACCCTTTAACGTTAATTCACGCTCCAGATGAGAGA AGCCTATGTGAGTTAGTTTTTGCATTTCTGAATTGATTCCGATGAAAAAAAGGTGATCCAAACATAAATGTAACATTATG ATATGATCAGCATGACCCATAAACATAAATTAGAATTGAGTATTGAAGAATGTTATTTTGGAAATCCTTTTTTACAATTG ATTCTAAATTTTAAAAAGTTCGGACAGAATCTACTGTGAGTAGTTTCTTAGTGCCATAATTGATTCCTAAGATAGATAAG CTGATCCAAACGTACTGTTAATGTGAAACAGATTCTAGCAGAGTTTGTGGGGACTTTCATACTGATATTTGCAGCAACTG CTGGACCAATAGTGAACAACAAGTACGATGGAGCAGAGGGTCTGATGGGAAATGCAGCTACTGCAGGATTAACAGTGATG TTCATCATCCTCTCCATTGGCCACATCTCTGGTGCACACCTCAACCCTTCCCTCACCATCGCCTTCGCGGCATTCCGCCA TTTCCCGTGGTCTCAAGTGCCGGCATACATAGCAGCACAAGTCTCTGCCTCCATCTGTGCCTGTTTTGCTCTCAAATATG TTTACCATCCTTTCTTGTCTGGTGGAGTCACTGTCCCTACTGTCGACATTGGACAAGCTTTTGCAACTGAGTTTATCATC ACTTTTATTCTCATGTTTGTGGTTACTGCTGTTGCTACTGATAGTCGCGCGGTGGGTTGATTGTCACTGCTTCTAGCAAT TCATGATCAAATTGCATTTATCATTTGTTTTCCTTTTTGTTAATTTACTTAATGGTCGTGTGCAGGTTGGTGAATTGGCA GGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTCATATCAGGGTAATCAACTTCCCTTATCTTCACACTTTGTTT CATCATTCATTTGTATTTCTTTAGTAAATTGAGATGGAGGAGATGGAGAAAAGTTTTGGGAAATAGGGAAAGCTCTCATC AAAGAAAAAAGGGTGAGAAACATTAAGGAGGTTCCATTATTGAATCAATTATGAGACCTGAGCTACTGTTAATTTTATAT CTAACAATTTAAAGTTCTAATGTTCTATAGCTTACTGTCTAAATTCCAAGGCTATTTAACGCAATCAATATCAAATCAAT GACTTGATACTCAAGGAAACCATAAGAGAAACGCAAGAAGATGTAGTTAATTATCACCTGCTAGCTCCATAATTTCTATC AAACAACACAGACACAGTTAACTTTGACATATCAGCATTTCTGGCAACTTCCCTTCATAACATATACCATTGCTGAAATC TCAAGGACCAAGGGTATTTATAGAAGCCTAACCAGAAACTAAGAAGTAACTCAACTGAAAACTAATAACAGACTAAGAGA TCAGAACCTGCCAAACTAAAACTCTAACTAACAGTATATGTTAGATTTACAGATACCCCCAAGTCCCTAACACATTTTTG ATATAAACTTTAAACTGCTGGATGATAACTTATCATTTAAGAATGATTTTATAAAATTGTAACAGAAAGAAAAAGGACAC TGTATGATAGAAGAGAAATTAAGCACTACATATTTTTATTTTTAAGGTAGCACTACATTAATTAATATAAGGGAGTAGTC TGAATAAGTGCTTAAACCCCCTGGCTCAAAAAAATGTTATGTTAGTTTGGAACTTAACAGTGAGATTTTACAGGTTTTAA TTTGAAATCTTTACTTTTATTTTACAAGTAAATAATCTTAGTGTTTTTACAAGTAAATAATCTTAGTGTTATGTTTATGG ATAAACAAATTGTTAGGCCAACAAGTGGAGGTTCCATGAATCCGGTGCGCACCTTGGGACCAGCCGTTGCAGCAGGAAAT TACAAGCATATCTGGATATATTTGGTGGCTCCAACACTTGGTGCTCTTGCTGGTGCTGGTGTTTACACCCTTGTCAAGCT GCGTGATGATGGTGCTGGACCACCACAACAGGTTAGGAGCTTCCGTCGCTAGATCTAGCTTGCTAGCTACGGAAACCTCA TCCCCACTGCTCATGTTTCAAGCCTCCCTGTATGATAGAACCTATAGAATAAATAAAATGTGGGGACTCCTTATGATTGA TCAAGTGTGTGAATTTATGTGTGTTTTTCTTTGTGTTATCATCATGTACGTCCTGGAAATGTTTGTTGTTGATGTTGATT TACTTCAGAGCCTGGCTATAGCCATGCTTTGTGTTGTGGTTTGTAAACTTTGAAATTAGTAATAAGTTTTGTTGTGTGAG ACGTTCTGTTTTCTTTTCCCTTTCTTGCTAGTATTTCTTTCTTCAAATTGAGTAAGGCCTTGATGAAATGCAAGAATGAA CATATTTGCCAAGACAACCCCTAATATAAAACCATTATATGACTATTACTTAATAGCTTTAGCTTTTAAGATAATTAATT GTTTAATATGTTTTTTTTTTCGAATATATATATATATATAGATAATGTTGAAAAACAACCTCTCCTAACATTGATACAGT AACCAAGTCAATAAAAAGCTGATAAAAACTCAGCTTCTACAGCAAAACTCTCCACCACTAAAAAAAACCACAAGGAGAAT CCCCAAAGTAAAGTCTACACCTCTAGGAGAATTCCCAATTAAAATTGAAAATAGCGACAGGTTTAACCGCATGGGATCTT ATCAATATGTTAATATGTTTAATATGTTATCAGAGTTTCTATGACTATACGGTCTAAAGTTCAATTATTATCACTCCCAA TTTTTTCTAATAAAAAGTTTAATATCAACACCTAATGGGTGGCTTGTACATTATCTACACTTATAAGATTTTGGAATAAT TAGTTGTTTGATTGTGTTACTTGCAAACAAAACTTCAAAGATTTGACACAATACCTTATTGGTTTTAGTTTTATGTGAGA AGTTCGATAATGTTGCCTAATGTATTTCATTTTTTGTGCTCAATAAGGCATTTGTATTTTTTTTTCCTTCACATTAATAG CATGATCTCTCTCATTTTTCTTCACTCCCAATATAGTTGTATCGAAAGGGGGCTAGCATCAGGCTTAGGCCCTCGATGTA ACAAAAAAAAAAAAGGGGGCTAGCATTAGTCATGACCAATTGACAAAAAAAAATGGTCATGAGTACCCG
CDS sequence (LotjaGi5g1v0286900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCACCAGCTGTGGAAGAAACTGAGATTGGGACTCCAACATCGATGCCGGCTACTCCAGAAACACCGGGAGGGCCGCT GTTCACGTCGCTCCGAATCGACTCGCTGGACGCTCGCGGGTCGTTCACGGGGCCTCGGTGCATGTGTCTGCCGCCGAAGG CTCATACGTGCTTGACTGATTTCTCTGCTGGTATTGGGATTGGAATTCCGAGTGTGCCTCTTACTCAAAAGATTCTAGCA GAGTTTGTGGGGACTTTCATACTGATATTTGCAGCAACTGCTGGACCAATAGTGAACAACAAGTACGATGGAGCAGAGGG TCTGATGGGAAATGCAGCTACTGCAGGATTAACAGTGATGTTCATCATCCTCTCCATTGGCCACATCTCTGGTGCACACC TCAACCCTTCCCTCACCATCGCCTTCGCGGCATTCCGCCATTTCCCGTGGTCTCAAGTGCCGGCATACATAGCAGCACAA GTCTCTGCCTCCATCTGTGCCTGTTTTGCTCTCAAATATGTTTACCATCCTTTCTTGTCTGGTGGAGTCACTGTCCCTAC TGTCGACATTGGACAAGCTTTTGCAACTGAGTTTATCATCACTTTTATTCTCATGTTTGTGGTTACTGCTGTTGCTACTG ATAGTCGCGCGGTTGGTGAATTGGCAGGTATTGCTGTTGGTGCTACAGTTTTGCTCAACATTCTCATATCAGGGCCAACA AGTGGAGGTTCCATGAATCCGGTGCGCACCTTGGGACCAGCCGTTGCAGCAGGAAATTACAAGCATATCTGGATATATTT GGTGGCTCCAACACTTGGTGCTCTTGCTGGTGCTGGTGTTTACACCCTTGTCAAGCTGCGTGATGATGGTGCTGGACCAC CACAACAGGTTAGGAGCTTCCGTCGCTAG
Protein sequence (LotjaGi5g1v0286900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPAVEETEIGTPTSMPATPETPGGPLFTSLRIDSLDARGSFTGPRCMCLPPKAHTCLTDFSAGIGIGIPSVPLTQKILA EFVGTFILIFAATAGPIVNNKYDGAEGLMGNAATAGLTVMFIILSIGHISGAHLNPSLTIAFAAFRHFPWSQVPAYIAAQ VSASICACFALKYVYHPFLSGGVTVPTVDIGQAFATEFIITFILMFVVTAVATDSRAVGELAGIAVGATVLLNILISGPT SGGSMNPVRTLGPAVAAGNYKHIWIYLVAPTLGALAGAGVYTLVKLRDDGAGPPQQVRSFRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 77 | 77 | - | – | |
| PANTHER | 18 | 301 | 284 | 1.4E-134 | ||
| PANTHER | 18 | 301 | 284 | 1.4E-134 | – | |
| Gene3D | 69 | 293 | 225 | 1.8E-63 | ||
| Pfam | 71 | 281 | 211 | 3.8E-51 | ||
| SUPERFAMILY | 73 | 287 | 215 | 7.98E-62 | ||
| CDD | 76 | 284 | 209 | 3.54126E-53 | ||
| PRINTS | 76 | 95 | 20 | 4.5E-39 | ||
| Phobius | 78 | 98 | 21 | - | – | |
| TMHMM | 78 | 97 | 20 | - | – | |
| Phobius | 99 | 109 | 11 | - | – | |
| Phobius | 110 | 132 | 23 | - | – | |
| TMHMM | 112 | 134 | 23 | - | – | |
| PRINTS | 115 | 139 | 25 | 4.5E-39 | ||
| ProSitePatterns | 133 | 141 | 9 | - | ||
| Phobius | 133 | 152 | 20 | - | – | |
| PRINTS | 152 | 171 | 20 | 4.5E-39 | ||
| Phobius | 153 | 175 | 23 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 176 | 189 | 14 | - | – | |
| Phobius | 190 | 211 | 22 | - | – | |
| TMHMM | 190 | 212 | 23 | - | – | |
| PRINTS | 196 | 214 | 19 | 4.5E-39 | ||
| Phobius | 212 | 217 | 6 | - | – | |
| TMHMM | 217 | 239 | 23 | - | – | |
| Phobius | 218 | 236 | 19 | - | – | |
| PRINTS | 227 | 249 | 23 | 4.5E-39 | ||
| Phobius | 237 | 262 | 26 | - | – | |
| TMHMM | 262 | 284 | 23 | - | – | |
| Phobius | 263 | 284 | 22 | - | – | |
| PRINTS | 264 | 284 | 21 | 4.5E-39 | ||
| Phobius | 285 | 302 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Channel activity | Enables the energy-independent facilitated diffusion, mediated by passage of a solute through a transmembrane aqueous pore or channel. Stereospecificity is not exhibited but this transport may be specific for a particular molecular species or class of molecules. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0286900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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