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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0294500 |
| Transcript ID | LotjaGi5g1v0294500.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | WD repeat-containing protein; TAIR: AT3G49660.1 Transducin/WD40 repeat-like superfamily protein; Swiss-Prot: sp|Q55FJ2|WDR91_DICDI WD repeat-containing protein 91 homolog; TrEMBL-Plants: tr|K7N3V2|K7N3V2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0294500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61191948..61196931) extracted from Lotus japonicus Gifu genome v1.2.
ATGAATGCTACCAACCTACTCAAAAGAGATATCGTACATCTAAATCATAAATTGTCGCAGCTTCAGGCTTTACTCGATGA GAAAGAGGCACAATTATGCCAATTTAGAAGGTAAGCATATTTTTATTCATTGCTCTTCGTCTCTCATGAGTCATGTTTAG TTTTCTAATTAATCTGGATTGAAGTTTGGAAGGAAGTATTAGTTCATCAAGCAATTTGCGTGAAGAAAGTACCCATATGT CAGAAGATTCTCCGAAGGTTTATCCAAGAGGAGTTCAAAAAGAGATTAGCCAAGATTCTATTGTTGATAGACCTGGATAT GTTCAGTCTGAGATTATCAGCTCCAAGTCAGGTGAAGATTCACCTTTCTTAATGAATGATCATCTGGTAAATGGCAGAGC TGGCGATGCCACTGCAAAAGGTCATGACAGTCCCCATATAGGAAGATATATATACTTCAAGGCCTCTTCCTCTTTGTAGT TGCTTGGTTGTATTTTGAGCAAGATGATGGCTACTTTCCATGGATATAGACTTATTTATATTATTATATTCATGTGCTGA CTTCTTCTAAAATGTAATCAATTCATTATTATTATTTCTAAAAAATAAATCAGGATGCTTTGTGTTCATCTGATCTTCAA AACACATCTAATTTTTAGGATGTTGAACAAACTGGTATTTAGGCTGAGGTGTCATTATGATTTCAGTAACCATATATTTC TATTTGGAAGTAAAACTTAACAATTATTTCGTGGCAGAAAATGATAGAGAAGTTTATGGGGAAGAAGATTTTGCTGAGGT CAAAGTGGAGCACCAGGTAAATTTGCATACCCTCCTTTGTTCCACAGTTTCATCTTACTTTTGACTAAGGTGAAAAGTCA TCCTGGCTTGCTTTCAACATGCCTTTTTTCATTATGAGAGTGAGCGAAAGAAGAATGGTTCGGGTGGAGGGCCTTAAACA GAAGGGGCTCACAGAATACTTCAGGGCTGGAGTGAAGAGCCACAAAAGCACCTGTCAGGAACTGTATAAAAAGGACCGAT AACTACATATGGTCTGAGACTGACTTCCTTGAAAAGAGGGAGACGAGTTATGTAGGCATAAGGGATAAAAAAACGTTAAT GTAGATATAAAATAGGAGTTTAATGGATATGCACTGACAGTGTAGAATAGTTTTACACAGACATCCAATTGAATTCCGCC AAATCAGAAAATATCTTATTCTTTTAATTAAAATTAAAGTCAAATGTAATTATCTCTCATATGTGGCATGCTTTGATTGG ATGACTGTGTAAAACTATTTTACACTATCAGTGCATATCCATTAAACTCATAAAATAGATATAAGGGATAAAAAAACCGT CTTTCTTAAAAAATGTCAGAAAAAAAATACCTTTTGATAGAAGCTCAAAAAGGTACATTATGAAAAAAGGAAAGAAATTT GTTTCAAGAAAATAATTAATGCCATTGCAATTGGTGTAAATATCAAATCATTGTGATTCTCAGGAGACATTTTTGGGGCA CACCAGTCCAATCACCCGGTGCCGCTTCTCTACATCTGGAAACAACATTGCTAGTGCCTCTCTGGATGGAACTGTCAGGT ACCCTCTTGGGAGTTGATGTAAACAAACATATCAAGATTATTACCCTAGGGGGAAATTAGAACATTCTTCATCTATTAGT ATTAATTACCAGGATGTAGCCTGTACTTATTTTCCACTATTAAGACTCCTTAGGAGTAGATGTATTTAGTGCAATACCAG CCAGCAATTCTTTTAACAATTGATAAGAATTTAAATTAAAGAAAGATATGAAGCTTGATGTACTCCAATGCATTTATGTT TAGAAATAGCCCTTTATAATGCTTACTTTTATGATATCAAGCTTCTTTACCTTTCACGGCAATTCTTATTTAGTTTTTAT GAAATCCCTCTCAAGCAATTTGGTCTCTGATTGCTCTATATGTTTTAATAAAGGATATGGACATATGATGCATCAACTCC AGTATCTAGAAATGCAACCATATATTGTGGCACCGAAATTTTGTCGCTTGACTGGGAATGTAAATCAGACCGCTTGGTAT GTGAATTGATTTATCAAGGAGATTGAGAGATTGAAATTATTCAGTTTTATTCATTATATGAGACTGTAAATTCAAATGAT AAAGCTGTTCCTTTTGATAAAAGCTTCTAATAGGTACATCTGATGGGTGCATTAAAGCTTGGAATGTGGATGCAAAGAGA GTTGTTTGTGACCTTAACACAACAGAAGAATTTCCAAGGTATTTCCTAATCATATATTGTTAGGTTTCTCTATTCATCAT TTTTTAACTGACACGTGTGGTTTTACAGTGTGTTGGACATAAAGTGCAGTCCCGTTGAACCTATTTTCGTGTCTGCAGCA GCTTCTAGAGGGTATTCACTAAAATTTTAAATATTGAATTCTTTATTGTAGTAGTAAATTGGTTTAATTTGGTGATTCAA TCCTCTGTTTTCATACAATGCTAGTCCAATTATCATATATAAATTTTTCTGTTTGGATTTTGGACATACGAATTAAACTA CAGTTAAATACCATTGGTCAAGGTATCTGGCCTTTTATTATGCTCTCAATGGACATCCTTTCTATTGTTTATTTTTTGTT AATTTACACTGTTAACACATTTTAGCAAGGAATTCTGAGGACCATGTTGTCTGTACAGGGCTGGTTCCAACTATCCTCAC AACCTGGGTTTCGCTTCACTAACTGTGTGGAACATGAAGACGTGGAAAGCCATGGTATGTGCTTCTTTGAATAGAATGTT TATGTTAATGTTGTTTTATGGCTATGTTTAATTTTGAATTTCATAAAGACAGTCCTTCCTCTTGGAGAAGATCCACCAGC AATTACTTCTCTATGCTTCAATCACAATGGGAAGATTTTAGCAGCATCTGCTGTGGATGGAATGATTCACATGTTTGGTA TCCTTAATTTCATTTATTCGACTACTTCTCTATGTTAATATATTTCGTAATTCACCTGTTGCTGGAATTGCTGACTTCCA TCATAGCGCGTAGCTTGTATTTAAGAAGTCATAACTGCCCTTGCTGGAATTGCTAATTTGATGCTTTTATTGTGCTTTCT CGAGGTTCCTAATGAATATTGGGATCAGATATTTGGTGTTCGTGTGTATTTTTATATCATATGTGAAAGATTTTTTACGT GAAAGTGAGAGGAACAAATCTTGACCATTAGATCTAACCATAAATGGTTAAGATTAAAACATGAACGCATGTGACCATTA AATAATTTTTAATTTTGACCATCCATGTGTCTAAATTTATCCCCCTCACGGCCTCACCCCATTCTCGCTAGATACAACCC TATATATGTGTGTGTATAGAGAACCTATTGTGAATGTATAAGCTGGGGGTCACATAGTTTGACAATCATGTCTTCCTTAT CAATCCAAAGACATGTCTGCTGGTCTACAAATCACTGGCTGGCCTGCACATGATTCTTCTATCAGTTCAATTTTTTTTGG ACCAGATGAGACTAGCATTTTTAGCCTGGGCTCTGATGGGAAGGCAAGTACTGCTAATTTAATGTTATTCTTGCTTGTAA AGTGGATGCCACACTTCATACTAATTGGTTCTTTGTTATCAGATTTTCGAGTGGAGTTTGCAAAATCAAGGTCAAATCTT GTGGTCAAGAGACTGTAGCAGGTATATTTATAGTTTGGCACCTTATGATTAGACTCGGAATATTTCTCCTTTCTTTCTTT TTTTTGCAAATATTAAGGCTCAAAATTGTTTTCACCATCCAAAGATGGGAACGCTAGATATATGAAATGGAGGGTTTAGC AAGGAAATATATAACTCATGATATAATTTTTACCTGTCTTCCATGAGTTCCTGTTCTGACTGAGCAAAAGTTGGAAAAGT TAAGAGCTGAGTCATGTCTGTGGATTTTGATTGTGAATTTACACCGGATGTGAATTTTGATTGTGAATTTACACCGGATC CACATCCATCTTCAAATACTTAATTTAAAGCAATGAATTGTAGTTTAGGCAACGGCCATCTTATATTTCTATTATTCTGG AGGAATTCTTCAATGGCCTTTTCTGTAGCAAACATGTATTTTAAAGTTAGATATAGGTCATCGAAATTATCATGCCTATA CATATCAGACGTTAATTGTTAGTGTTGATTTACAAGCTATTCATGAACAATACTTTGTATTACCTAGAGTTAACTTTCAA TTGAATGTCGTAAAATTTCAAAATGGTAATATTATAATTTCATATGTTTTATTTAGTGTTACTAATAGCATAAAATTATG TAATTGTTGGGGGATGGGCTAATCACCTGAATCACAACTGGGATTCAATGCATTTATGGAATAAAATAGGTACGACCTCT GTGTGTGTGTGTGTGTGTGTGTGCTGTTAAAAATACTTTATCTCATTCATGAAATGTGAGGGATAATGTCGTATGTCCGC TCTATATATCCTTGCTTTTAGATATGTGTGGAGAATTAATTCTGAGCATGATGTATTTTTTTTTGACATTTCATAGGTTC TGTTCCCCCCTCAGTGCTTCAAAATATAGCAGACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACATC CAGTTCTGTTAGAGCACCCATATATCAGGTTGATTGTTTCTTGAGTTCTTCTGCATGCATTGTGATTAGGCCTTCCCTTT GAAGGGATTGTAATTTACGTACCTATATTTTAGTTGGACTTGTAAAATTTTGGCTTGAATATTTCCAATTAACTTGTTAC TTGTTAGTTATCTGAAAATGTAAATGTCGGTTGGTTGCGTTGTCAGGTTCAGGGTAATTTGACTGGTTGGAGAACACTTC CTCACGGTGCTCCTATTACCGCTGTAGATTGGCATCCGACATTACCCATTTTCTTGACTGGATCAGCTGATAACTCTGTC AGAGTAACATCTTTGTTATCATAG
CDS sequence (LotjaGi5g1v0294500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATGCTACCAACCTACTCAAAAGAGATATCGTACATCTAAATCATAAATTGTCGCAGCTTCAGGCTTTACTCGATGA GAAAGAGGCACAATTATGCCAATTTAGAAGTTTGGAAGGAAGTATTAGTTCATCAAGCAATTTGCGTGAAGAAAGTACCC ATATGTCAGAAGATTCTCCGAAGGTTTATCCAAGAGGAGTTCAAAAAGAGATTAGCCAAGATTCTATTGTTGATAGACCT GGATATGTTCAGTCTGAGATTATCAGCTCCAAGTCAGGTGAAGATTCACCTTTCTTAATGAATGATCATCTGGTAAATGG CAGAGCTGGCGATGCCACTGCAAAAGAAAATGATAGAGAAGTTTATGGGGAAGAAGATTTTGCTGAGGTCAAAGTGGAGC ACCAGGAGACATTTTTGGGGCACACCAGTCCAATCACCCGGTGCCGCTTCTCTACATCTGGAAACAACATTGCTAGTGCC TCTCTGGATGGAACTGTCAGGATATGGACATATGATGCATCAACTCCAGTATCTAGAAATGCAACCATATATTGTGGCAC CGAAATTTTGTCGCTTGACTGGGAATGTAAATCAGACCGCTTGCTTCTAATAGGTACATCTGATGGGTGCATTAAAGCTT GGAATGTGGATGCAAAGAGAGTTGTTTGTGACCTTAACACAACAGAAGAATTTCCAAGTGTGTTGGACATAAAGTGCAGT CCCGTTGAACCTATTTTCGTGTCTGCAGCAGCTTCTAGAGGGGCTGGTTCCAACTATCCTCACAACCTGGGTTTCGCTTC ACTAACTGTGTGGAACATGAAGACGTGGAAAGCCATGACAGTCCTTCCTCTTGGAGAAGATCCACCAGCAATTACTTCTC TATGCTTCAATCACAATGGGAAGATTTTAGCAGCATCTGCTGTGGATGGAATGATTCACATGTTTGACATGTCTGCTGGT CTACAAATCACTGGCTGGCCTGCACATGATTCTTCTATCAGTTCAATTTTTTTTGGACCAGATGAGACTAGCATTTTTAG CCTGGGCTCTGATGGGAAGATTTTCGAGTGGAGTTTGCAAAATCAAGGTCAAATCTTGTGGTCAAGAGACTGTAGCAGGT TCTGTTCCCCCCTCAGTGCTTCAAAATATAGCAGACATGAGATGGCATTAGATGCAAATGGGAGGAGACTCTTGGTAACA TCCAGTTCTGTTAGAGCACCCATATATCAGGTTCAGGGTAATTTGACTGGTTGGAGAACACTTCCTCACGGTGCTCCTAT TACCGCTGTAGATTGGCATCCGACATTACCCATTTTCTTGACTGGATCAGCTGATAACTCTGTCAGAGTAACATCTTTGT TATCATAG
Protein sequence (LotjaGi5g1v0294500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNATNLLKRDIVHLNHKLSQLQALLDEKEAQLCQFRSLEGSISSSSNLREESTHMSEDSPKVYPRGVQKEISQDSIVDRP GYVQSEIISSKSGEDSPFLMNDHLVNGRAGDATAKENDREVYGEEDFAEVKVEHQETFLGHTSPITRCRFSTSGNNIASA SLDGTVRIWTYDASTPVSRNATIYCGTEILSLDWECKSDRLLLIGTSDGCIKAWNVDAKRVVCDLNTTEEFPSVLDIKCS PVEPIFVSAAASRGAGSNYPHNLGFASLTVWNMKTWKAMTVLPLGEDPPAITSLCFNHNGKILAASAVDGMIHMFDMSAG LQITGWPAHDSSISSIFFGPDETSIFSLGSDGKIFEWSLQNQGQILWSRDCSRFCSPLSASKYSRHEMALDANGRRLLVT SSSVRAPIYQVQGNLTGWRTLPHGAPITAVDWHPTLPIFLTGSADNSVRVTSLLS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 453 | 452 | 5.9E-233 | – | |
| Coils | 11 | 31 | 21 | - | – | |
| MobiDBLite | 43 | 63 | 21 | - | – | |
| Gene3D | 101 | 259 | 159 | 1.3E-20 | ||
| SUPERFAMILY | 130 | 450 | 321 | 2.38E-47 | ||
| SMART | 131 | 170 | 40 | 9.4E-9 | ||
| Pfam | 135 | 169 | 35 | 3.9E-7 | ||
| ProSiteProfiles | 138 | 179 | 42 | 13.951 | ||
| ProSiteProfiles | 138 | 455 | 318 | 23.994 | ||
| SMART | 176 | 215 | 40 | 3.2 | ||
| ProSitePatterns | 202 | 216 | 15 | - | ||
| SMART | 275 | 316 | 42 | 0.0032 | ||
| Pfam | 285 | 338 | 54 | 8.5E-5 | ||
| SMART | 319 | 358 | 40 | 0.68 | ||
| ProSiteProfiles | 326 | 361 | 36 | 9.773 | ||
| SMART | 414 | 452 | 39 | 3.2E-4 | ||
| ProSiteProfiles | 420 | 455 | 36 | 9.874 | ||
| Pfam | 423 | 450 | 28 | 0.0062 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0294500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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