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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0332400 |
| Transcript ID | LotjaGi5g1v0332400.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | ALG-2 interacting protein X; TAIR: AT1G15130.1 Endosomal targeting BRO1-like domain-containing protein; Swiss-Prot: sp|Q8T7K0|ALIX_DICDI ALG-2 interacting protein X; TrEMBL-Plants: tr|A0A0S3SM52|A0A0S3SM52_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0332400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64959290..64963678) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGGGTCGACGTCGTCCTCCGCCGCGGGCAGCACCAATATCATGCTCGCGATCTTCGAGAAGAAGGCGAACACGGT GGATCTCTACCGCCCCCTCCGCAACTACGTCGCCTTCCACTACTCCGAGCGCGAGGCCCAAAACATCGAAGACGATCTCC AAACCCTAAAGCAGCTCCGCTCCGACCTCGACCGCAACCCCGATCCCTCCCTCCCTTCCCGCCGCGACCTCCTCCAGAAC TACTTCAAGGCTCTCTGCCAGGTCGAGACCCGTTTCCCCATCTCACCCGACCCGGACCATGTCAACTCCCTCACCTTCGT CTGGTTCGATGCCTTCAAGCCCAAACTGAAAGCCTCTCAGCAGAACATCCACCTCGAGAAGGCCTCCGTTCTGTTTAACC TCGGCGCCGTCTACAGCCAGATTGGTTTATCTTACGACCGCAACTCCGTCGATGGCCGCCGGCAGGCTTCCCACGCCTTC ATCGCTGCAGCCGGATCCTTCGCTTTTCTACGGGACAATGCCTCCATGAAGGCCTCCATCGGGAACTCCACCACCGTCGA TTTGTCCGTCGAGTGCGCTGGAATGTTGGAGAAGCTCATGCTCGCTCAGGCTCAGGAGTGTGTCTTCGAAAACACCATTG CTAAAGGGAGCACCCCTGGTGTTTGTGCCAAGATCTCTAGACAGGTTAATCCGAATTTATTTGCAAATTGTTTGTTTGTC TTTCTGATTGTTCCACATGGATTGTTTTGTTTCGCGGCTAATTGTTTTGACTCTACGGTTAGGTTGGACTGTATTATGAG GAAGCATTGGCCGCGCTCAATGTTGCGCCTTTAAGCCAGCATTTTGACAAGTCATGGATAGTTCATGTGCAGTTAAAGTC AGCTCTATTTTATTCAGAAGCTTGTTACAGATGTGGATTGGAACTGCATGAAAAAGAGGAGATAGCGGAGGAGATTGCTA GATTAAGGAGTGCGGTTAGTGTTCTTACCGAAATTAAGAAAAGCTCAAAGGGTGCTGCGGTTCAGATTCTGGATGCGATT AGCAAGTTGGAGGTCAATATTAACCGGAACTTGGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACCTCATGAGAGTTCC TTCTCCCAGTTCGTTGTCACCACTTCCAGCATTTTCTATGGTGAAACCTATGCCGATGAACGAGGTGTTGGATGCGAGCA AAGAGAAGATGTTTGCAAGTCTTGTCCCTGACAACAGTGCAAAGGCTCTCTCTAGGTACACCGAGATGGTGGATGATATT ATAAGAACACAAGCTGAGAAGTTACAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAGCTGCCAGATTC TATTCTTGCTTTGGAAGGAAATTTTACTCTACCAACAAATCTCAAAGAAGATGTCGAGGCTGTGCAGATCAGTGGGGGCC CTGCTGGTTTGGAATCAGAGCTGCAGCAACTTAAGGATCTGAGGAGGGTGAATCAAGAATTGTTGGTTCAGACTGAGGAG TTATTGCAGAAGGAAGCAAGAGAAGATGCTCAGTTTAGAAGCCAATTTGGAACAAAGTGGACTAGGCCTCAATCAAGCAC TTTGACAAAGAACTTGCAGGATAGACTCAACAGGTTTGCGGGTAACCTGAAACAAGCTGCAGAAAGTGATTCTAGGATTG AGCGTTCAGTTAGAGAACATTCGGCTCTCATGGCAATCCTGGATGCCCGTCCGGTAAATTGTTATAGTATTTGTTGTGTC TTATGACATATTTGGTTCTTGGTTTGGTAGTAGTTAAATTCATTGAGTCTGTTTTGCCTTTCATTAGATTGAATCAGCAC TCCCGAGCTTGGCAAGGCCAATTATGTCTTTTGATCAAAATGAAGATGCTGTCGTGGGGTCTCTCAAGCAAAGCTTGGTA AGTTGTTTTTGGCTTGTTAGTATTATATGTTGACTTTCAGGGGAAAATCTATTACATTTCTTGAAATCATAATTACTTGC TATTTATTGTTGTACGATGTATGTATTAATTCCAGATATAAATTTAGTGAAGAATAATTCTGTTGTGGTATATTTTGAAA TATTATGTTTCAAAACTAGTTGGGGTGAAGATCTTATAGCAATTTCTATGATCCTAATTTCCCTTCTATAAATTGTGATT GACTGATTATAAATTTCACCAATCAACTAAGCTTTGAATGTTTTCTTCTTAACTACACTCTTTATTAACACTAACATAGC TTATAAAAGTTAAGAAATTTCTGGGCAAATTTGAAATTTGAACTGGAATGGAGTATTGAATATAGCTAGCAACCGAAAGA CTTTTGAATATACATCTTGAATATTTTAGTAATCTTTGATTTCTATTGAATTTTTATGCTCATTGATATAGAGACAACTA GAGACTCTTGGAGCTCAAAGGGCTGGTCTTGAAGACATGTTGAAAGAGATGAAAAGAAAGGTATGCCTGATAAGCATGAT TCACGTAATTACATTTTTGCTTGTTCTGCAAAAGCTAAATTTTCCTGTCTTGTTATCTGAAGACATGAAATATGCCTGTG CCTTCACTGCAAATTTAAGCCATCATTTGCTCTCAAAATGCTGGTTTTCTGGCAACAGTCTATGATATCAAAGTGATATA ACAAATACAAAGTCTCATCCTGCTATTTGCATATAGTATGCATGCTGTCTTTTGTCTCAACTATGAATGCCTTTTGTCCA GTATGTATTTCTGTAGTGTAAATAGGAATTAAACATGTGTAACATTCAAAAGAATACTAACCTATTCCATCTCCTGGAAT GCTGACTGCACAAATAGAAACGAAAGGAATGGGAAATATTTTCTGACTGTAAATGATTATGGAGAGCATGCGTACCTTTT GTTAATCCAACTTTACATATACACGAAGTTTAGCTCTGTCTTGGAAGAAGCATTATTTTACTTATGAAGTGATTTTGTGA TGAAATTTAGGTGCATACCAGGATATAATTGTAATAAATCGTCGATTTTTTTTCTTTTACCTTGTGCACCCAATGCAAAT TATGTTCATGTGATGAGTGCTGAAGGAAAATATATTAAATGAAGTATATGATAGTTTTGTGTATATTGGAGACTTACATT TTTGATTTTTGACCTTATGCCTCTCAAGCTGTTATATGATACAAAAAATCAGTATTTGATACAGTATGATATATATAAAC ACCAAACTTTTTGGGGAAACATTAAGTTATGGGTGGTGTAATGGTGTTAAAAAATTATAAAAAATATATGTATGTTATTG GCACACCCATAAAAAATGAGTAGATGAAATAAAAATTATCCATCTATTAAAATTTAAAATGTATCCACCCTTTATATATA TATATATATATATATATATATATATATATATATATATATATATATATATATATGTCATTGGTGTAATGGTGTTAAAAAGT TCTCTATGTCCTTGTTGTCTGCCCCCTTGCTCTGAAGTCTGAACCCAGTCCCTGTCTACTGATAATTGGATACGTCAATT TTGGTGTATCCATGCATCATAGCTCCCAGGTGTGAAGACTATATTTTCAGTATCCTTGCCTACACGATTTATCATTCATA AAGTCCTTCCTTCTTATATTGAGTAATTTAAACATGAAGTTTTTTACCTGATGTGTAACTGGGGTTCTATCATTTGAATA CAAGATTATCTACAGATAATGTGAAATTAAGACTGAACTGCAATTATGAATGATAAAGCAAGAGTATACAGAAAATTTCT ATGTAGATTTTGCATTTCTTTTAACTTGTTGTGAAAGGTGAATTAGTGGTCTGGATTTTGTTTTCTTCATTTAGAGGTTT CTAATGCTCTGAATACAAAAAATTGACGAGAGTTTGCTTCTCCTATGTAGTTTCCCATTCGTAAAATTGTTATGTACTAA AATCATCTTGGCTTATATTTCGTAAATATCTTCAGGATGATATATTACCCAAGTTGATGACATCCACCGGTTCTTATGAG GACCTTTTCAAGAAGGAGGTAGCAAAATATGACCATATTTGTGAAGATATAGCTCAAAATATTGAGGCTCAAGAGCAGTT GTTGCTGCAGATCCAGGTGATAGAACTAGTACATTAAGAAAAGAAAGATGTCCCCAACCATCTAGTAGATTTGTTTTTTT TTTTTTTGGACTACCTTTTCTCAAACAATGGTCATTCACATTGGACCATACTCTTGAGATCCTTGATTAATAATGCGACC TCACCTGACCACATTTTATAACAGCAAATGCAAACTTCCAATTTTTATATTCCATGCTTCGGAGAGAGAAAAACTAATAC CTGTAAAGACAAAAATGATAAATTATATTTCTATTAAATTAACCATTTTAGATCTTTTCAGTCATATGA
CDS sequence (LotjaGi5g1v0332400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGGTCGACGTCGTCCTCCGCCGCGGGCAGCACCAATATCATGCTCGCGATCTTCGAGAAGAAGGCGAACACGGT GGATCTCTACCGCCCCCTCCGCAACTACGTCGCCTTCCACTACTCCGAGCGCGAGGCCCAAAACATCGAAGACGATCTCC AAACCCTAAAGCAGCTCCGCTCCGACCTCGACCGCAACCCCGATCCCTCCCTCCCTTCCCGCCGCGACCTCCTCCAGAAC TACTTCAAGGCTCTCTGCCAGGTCGAGACCCGTTTCCCCATCTCACCCGACCCGGACCATGTCAACTCCCTCACCTTCGT CTGGTTCGATGCCTTCAAGCCCAAACTGAAAGCCTCTCAGCAGAACATCCACCTCGAGAAGGCCTCCGTTCTGTTTAACC TCGGCGCCGTCTACAGCCAGATTGGTTTATCTTACGACCGCAACTCCGTCGATGGCCGCCGGCAGGCTTCCCACGCCTTC ATCGCTGCAGCCGGATCCTTCGCTTTTCTACGGGACAATGCCTCCATGAAGGCCTCCATCGGGAACTCCACCACCGTCGA TTTGTCCGTCGAGTGCGCTGGAATGTTGGAGAAGCTCATGCTCGCTCAGGCTCAGGAGTGTGTCTTCGAAAACACCATTG CTAAAGGGAGCACCCCTGGTGTTTGTGCCAAGATCTCTAGACAGGTTGGACTGTATTATGAGGAAGCATTGGCCGCGCTC AATGTTGCGCCTTTAAGCCAGCATTTTGACAAGTCATGGATAGTTCATGTGCAGTTAAAGTCAGCTCTATTTTATTCAGA AGCTTGTTACAGATGTGGATTGGAACTGCATGAAAAAGAGGAGATAGCGGAGGAGATTGCTAGATTAAGGAGTGCGGTTA GTGTTCTTACCGAAATTAAGAAAAGCTCAAAGGGTGCTGCGGTTCAGATTCTGGATGCGATTAGCAAGTTGGAGGTCAAT ATTAACCGGAACTTGGAAAGGGCTGTCAAGGAGAATGATAGAGTTTACCTCATGAGAGTTCCTTCTCCCAGTTCGTTGTC ACCACTTCCAGCATTTTCTATGGTGAAACCTATGCCGATGAACGAGGTGTTGGATGCGAGCAAAGAGAAGATGTTTGCAA GTCTTGTCCCTGACAACAGTGCAAAGGCTCTCTCTAGGTACACCGAGATGGTGGATGATATTATAAGAACACAAGCTGAG AAGTTACAGCAAGCTAGTGAGCTAACCCGAGTTAGGCTTAAGGAAATGGAGCTGCCAGATTCTATTCTTGCTTTGGAAGG AAATTTTACTCTACCAACAAATCTCAAAGAAGATGTCGAGGCTGTGCAGATCAGTGGGGGCCCTGCTGGTTTGGAATCAG AGCTGCAGCAACTTAAGGATCTGAGGAGGGTGAATCAAGAATTGTTGGTTCAGACTGAGGAGTTATTGCAGAAGGAAGCA AGAGAAGATGCTCAGTTTAGAAGCCAATTTGGAACAAAGTGGACTAGGCCTCAATCAAGCACTTTGACAAAGAACTTGCA GGATAGACTCAACAGGTTTGCGGGTAACCTGAAACAAGCTGCAGAAAGTGATTCTAGGATTGAGCGTTCAGTTAGAGAAC ATTCGGCTCTCATGGCAATCCTGGATGCCCGTCCGATTGAATCAGCACTCCCGAGCTTGGCAAGGCCAATTATGTCTTTT GATCAAAATGAAGATGCTGTCGTGGGGTCTCTCAAGCAAAGCTTGAGACAACTAGAGACTCTTGGAGCTCAAAGGGCTGG TCTTGAAGACATGTTGAAAGAGATGAAAAGAAAGGATGATATATTACCCAAGTTGATGACATCCACCGGTTCTTATGAGG ACCTTTTCAAGAAGGAGGTAGCAAAATATGACCATATTTGTGAAGATATAGCTCAAAATATTGAGGCTCAAGAGCAGTTG TTGCTGCAGATCCAGGTGCAAATGCAAACTTCCAATTTTTATATTCCATGCTTCGGAGAGAGAAAAACTAATACCTTCAT ATGA
Protein sequence (LotjaGi5g1v0332400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGSTSSSAAGSTNIMLAIFEKKANTVDLYRPLRNYVAFHYSEREAQNIEDDLQTLKQLRSDLDRNPDPSLPSRRDLLQN YFKALCQVETRFPISPDPDHVNSLTFVWFDAFKPKLKASQQNIHLEKASVLFNLGAVYSQIGLSYDRNSVDGRRQASHAF IAAAGSFAFLRDNASMKASIGNSTTVDLSVECAGMLEKLMLAQAQECVFENTIAKGSTPGVCAKISRQVGLYYEEALAAL NVAPLSQHFDKSWIVHVQLKSALFYSEACYRCGLELHEKEEIAEEIARLRSAVSVLTEIKKSSKGAAVQILDAISKLEVN INRNLERAVKENDRVYLMRVPSPSSLSPLPAFSMVKPMPMNEVLDASKEKMFASLVPDNSAKALSRYTEMVDDIIRTQAE KLQQASELTRVRLKEMELPDSILALEGNFTLPTNLKEDVEAVQISGGPAGLESELQQLKDLRRVNQELLVQTEELLQKEA REDAQFRSQFGTKWTRPQSSTLTKNLQDRLNRFAGNLKQAAESDSRIERSVREHSALMAILDARPIESALPSLARPIMSF DQNEDAVVGSLKQSLRQLETLGAQRAGLEDMLKEMKRKDDILPKLMTSTGSYEDLFKKEVAKYDHICEDIAQNIEAQEQL LLQIQVQMQTSNFYIPCFGERKTNTFI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 10 | 376 | 367 | 9.0E-102 | ||
| PANTHER | 10 | 649 | 640 | 0.0 | – | |
| PANTHER | 10 | 649 | 640 | 0.0 | – | |
| ProSiteProfiles | 14 | 409 | 396 | 48.54 | ||
| SMART | 15 | 399 | 385 | 7.5E-112 | ||
| Pfam | 16 | 395 | 380 | 7.6E-107 | ||
| CDD | 16 | 371 | 356 | 4.86146E-152 | – | |
| Coils | 46 | 66 | 21 | - | – | |
| Gene3D | 377 | 648 | 272 | 3.9E-53 | – | |
| Gene3D | 423 | 554 | 132 | 3.9E-53 | – | |
| Pfam | 431 | 648 | 218 | 1.7E-54 | ||
| Coils | 451 | 478 | 28 | - | – | |
| Coils | 578 | 598 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0332400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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