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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0366100 |
Transcript ID | LotjaGi5g1v0366100.5 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Kinase family protein; TAIR: AT5G13160.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1; TrEMBL-Plants: tr|A0A151U8B2|A0A151U8B2_CAJCA Serine/threonine-protein kinase PBS1; Found in the gene: LotjaGi5g1v0366100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:68086899..68091559) extracted from Lotus japonicus Gifu genome v1.2.
CATCTGAATCAAGCAGGCTAGCCTTCACTCATGTCATGACTGCTGCTCCTAATTCATTCAATTCAATTCAATTCAATTCA CGGTGATTCATGGTCACGCAGCACAGCTTTGTTTCGTTTAACCTAATTGTGTCTGTCTGTTGTTGTTTTGTATTGCATTG CATAGCAGGAGTAGACAAGCTACGCCCAACAAGTAATGGAGCCTCCAAAAGGGAATTGCCAGCACCTGGCCTCAAGGACA AAGACAAGGACAAGGACAAGGACAAGGACAAAGACAAGGACAAGGACGGACTTGCAGCTGTCCAAATTGCCGCTCAAACT TTTACTTTCCGTGAACTTGCAGCTGCTACCAAAAACTTCAGACCCCAGTCCTTTATAGGGGAAGGTGGTTTTGGAAGGGT CTACAAGGGGCGCCTCGAAACCACTGCCCAGGTACGTAAACCTTTCTATCATTTCCTCTTATTTTTTCACTACTCTTCAA TAATATCCAAAAATAGAAAACCAAACAACATGGTGTTTTTCCCCATATTTTCCCTTGCCCTTTTGTATGCTTGTCTCACC ACTGCACTATCTCCATTTTGATTTTTAAAGGACACAATTTGCCTCTCCCCCTTGTTCATAGTTTCACAATATTGTTCTTA TCATCACTGGAAACAGTGGTAAACTAGGAAATAATGGTATGCAACTAATGAAAAATAATAATTGTGGCAGCCCCGAGGAG GACAATGAACTAATGGATAATAATAATTGTTCATATTTTTTGCTTAATGTTTCCTTCTCTATCTTATATAGTATAACATT TTCTCAACTCACCATGCTCTTGTTTCTGCTTCTCACTCAGTTTGCAACTTCAATGTTTGCCAACTTTTATTCGTAAATTT GTCTTTTGTTTTTGTTTAGAAGATAAATCTTAAGAGTTTTAGTTTGGTTGAGGCTTCCAGTGTCTATTGACTCCTGACAG TTGTTCATTTATCTCTACAGGTTGTTGCTGTTAAACAGTTGGACAGAAATGGTCTCCAGGGTAATCGGGAATTTCTTGTT GAGGTTCTCATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGAGACCAACGCCT CCTGGTTTATGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCATGGTATGGTTGTGATCTACACCTCTGGATTCT GTGGGAATTTCTTTGTTTTAGTTGAGTTTTTTTTCATACACTAAGAAATGGGATGGGATATTAGTATTCTTCATTAGAAA TGTACTGAACCCCAGGATGAGTAGCTAATACATTTAAAAATGAAATTAAAATCTCATCAATATCCCTTATGTCTTTTACA ATACTAGTATAAGGAGCATGTCACAAGACAAGACATTATCTGAAGTTTCATATTTCTGAGAAAAGACTTAAGGTAAAATG GTACATTATCTTACATCAATGGTGAAATTATGGTACAGTGTAAATTACCACTATGTATTTTGCAATACTGAAAAACATAA TTGAAAGATCCAAAGAAAAAAGCTGTGCTAAGGTTAAATCATGTAGTAGCTGGTGTATTCTAGGACTGACTTTGACTTTC TCTTTTAGAATATCACTTCTTGTCAGTTAGTTGGTTGTGCTTGTTGGAATGCAGGGTAGTCATGGTTAAGATGTTCTTAA TCAGCATTTAGAGTGAGCGAGTGTTGTTTGTTTTTCTTACATTCTTGAAGGTGATAAGAAAATTTCCGTCTTGGTAATTT TAATTATTCCACAACTTTTAGTCTTGAACTTATTATGGTTACAGGCAATTGTCTGTGGGTTTTTTGCTCTTATATAGGAA CACCTATGCAGCTATGCTCATTATGTTATGAGCTTTTAGTTGTTATTTTCTGTGCCTTGCCTCTATGATGTATATGGTTA TAGCCAAGTCTCACATAGAAGTAATAAAATTTTGGGCAACAGTACGATACGACATGGCCATGATTCATGTCTTGAGATTG CTGCTTGCTCAACAAATATTCTGTAGCATTGATCAGGATAATTTCATGTGGTTTTCCTCAATCCTCATTATTTTGTGCTT ATTAGTTTCTGTGCCAATAAGAGGCAACTATAAATAAAATTTAAATTTAAATTTTGCTGTTATATAACTTGTTAGCATTT CTATTTTCATATTCACTCCCCCCCCCCCCCTCTCTCGTCTCAACCATCGTCAACCTGGGTCACTTTCATCTCTCAACTCT CCAGCTCTCTCTGCTATAGACCTTTCTATATCTGCCGGCTCTTGCTCTTCTTTTTTATCTGAAGTAGCAAAACTCTAAAC ATTTGGTCTTTGTTTTGGGCCTTCTCGTGAAATACAACCTCTTTGATCTTGGAGTTTTGGGTATACAAGATCTTTGGGTT TAGGGTTCCCTATAAACTTTCCTATTTCCTTTATATTTTCTTCTTTTCATAATCACTATGAAGTATACAATAGATATTGA ATAATATACTTGAATTGTATCATTACACTTTTTATGTTATAGTATATACTTCTTTATATTTTTGGTAGGATCTTATGATT TGTGTTAGGATCCTTTTGATTTACAATCTTTCACTTACCTCCCTCTCAATCCTAAGTAGGAACTTGATTTTGACAACCTT GATTGTTGTTGTATATTAAGTGAGGCAGCGGTGATCATTGGGGCTAAGCTTTTGGATTAGAGGTAAGACTTTTGATAGAG AAAACTAAATATCAGCTCAGTCTGAATAGAAGTAGGAGGGCCAAAGGCTCCTTCCGAAATTTCATATAAGAATAAAATAA AAAATTTACATTTAAAAAGTTTTAAATGAAAAGTGAAGGATATTTTTTAAATGAGTTAAACCTGTATATATATATATATA TATATATATATATATATGTTTCTTTCGAAGGCCAAGCATGGCCTAATTATATTCAGACCTGGGCGTGAAAGAATTAATTG GAATTTCTACAGTGAAGATATTTCATTGGTTGTTTTAGCCTTCTGATTTGCCAACTCATTTTACTAGAGATGTATGCAGG GGTGAATAAAGTGTGATATTAAGTGCATTGACAATGTAGGATCTTGAACCTGAACATTAATAGAATTTCTTGGTTGAAAG AATAAAAAATGGAGGTAACTATTGTGTATTCATTGAAGTCCTTGAAATTGCAATATTGTGGTATTATAAAATAGTGGACT TTAAAAGTCTATACCTAATGACTAATGAAACTTCCAAACCATCAATTTAGCTAGAAGGACGGAGCAATTCATCTTAAACT CCTCAGGGCTCCATTTTTTCTCCTTCAAGAGAGACATAGAGAGAAGAATGAACATGTCACTCTGGAAGATTTATTTATCA ATGATTATGCATATATATGTTATGTAGTGGCTGATGAAATCTAATAATTTTTCCTGAACAAGCCTATTCAATTTAGTGGG GAGCCTAGCCTTTCCATGTTAATTGTCTTAATTCCAATTTACAGAAAAGGAATGCTATACATATTTTAATCATTGTATTG TCTTCTAGAGGTGTTTCCATTTTATCTTGTAATCATATTTGTCTTCTGATGATTGAGGAGTGTCTGTAAACTCTGGGAAG GATGGAGAATAAACGCTGTGGTTATCACATTACAGTCTTCTTGATCATCATGTTATCTTTTATCTTTGATAACTAATGTT TAATCATTGTTTATTGACTCGTGTGCAGATCTTCCCCCTGATAAGGAGCCCTTAGATTGGAACACTAGGATGAAAATAGC TGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTCATTTATAGGGACTTCAAGTCATCTA ATATATTACTTGAGGAAGGTTTTCATCCAAAGCTTTCTGACTTTGGTCTAGCAAAGCTTGGTCCTGTTGGTGACAAATCA CATGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTATGACTGGGCAACTGACAGTGAAGTC TGATGTATATAGTTTTGGGGTAGTATTTTTGGAGCTGATTACTGGCCGTAAAGCCATTGACAGCACTCTGCCCCATGGAG AACAAAACCTTGTCACATGGGTAGTCCTCTAATCTTTTCTTTTCATTTTAAGTTAGATTGGCATGCATCAACTTGTGCAT ACATAACAATGGAGCGGTAATGGTGGTTATGTGTGTTTTGAACAGGCACGCCCATTGTTCAATGACCGCAGGAAGTTTCC AAAGTTGGCAGATCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCA TTCAAGAGCAGGCAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCACTCTCTTACCTGGCCAATCAGGCTAATGAC ATTAACAATGCTGGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGAATATTGAAAAATGATGAAGGTGGAGGATC TGGAAGAAGATGGGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATATTAAACAGGGATCTTG ATAGGGAACGTGCTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGGAAAAAAGACGACAAAGTGTGCAGGGCAGT TTTGATGGTTCTAATGCCTAG
CDS sequence (LotjaGi5g1v0366100.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCCTCCAAAAGGGAATTGCCAGCACCTGAAGGACGGACTTGCAGCTGTCCAAATTGCCGCTCAAACTTTTACTTT CCGTGAACTTGCAGCTGCTACCAAAAACTTCAGACCCCAGTCCTTTATAGGGGAAGGTGGTTTTGGAAGGGTCTACAAGG GGCGCCTCGAAACCACTGCCCAGGTTGTTGCTGTTAAACAGTTGGACAGAAATGGTCTCCAGGGTAATCGGGAATTTCTT GTTGAGGTTCTCATGCTTAGTCTTCTACACCACCCTAACCTTGTGAATCTCATTGGATACTGTGCGGATGGAGACCAACG CCTCCTGGTTTATGAATTTATGCCACTGGGATCATTGGAAGACCACCTTCATGATCTTCCCCCTGATAAGGAGCCCTTAG ATTGGAACACTAGGATGAAAATAGCTGCTGGTGCTGCAAAAGGATTGGAATACCTACATGACAAGGCAAATCCTCCAGTC ATTTATAGGGACTTCAAGTCATCTAATATATTACTTGAGGAAGGTTTTCATCCAAAGCTTTCTGACTTTGGTCTAGCAAA GCTTGGTCCTGTTGGTGACAAATCACATGTTTCCACCCGTGTCATGGGAACTTATGGTTACTGTGCTCCTGAGTATGCTA TGACTGGGCAACTGACAGTGAAGTCTGATGTATATAGTTTTGGGGTAGTATTTTTGGAGCTGATTACTGGCCGTAAAGCC ATTGACAGCACTCTGCCCCATGGAGAACAAAACCTTGTCACATGGGCACGCCCATTGTTCAATGACCGCAGGAAGTTTCC AAAGTTGGCAGATCCCCGGCTGCAGGGGCGGTATCCCATGCGCGGTCTTTACCAAGCTCTAGCTGTGGCATCAATGTGCA TTCAAGAGCAGGCAGCAGCACGTCCTCTGATTGGTGATGTCGTGACGGCACTCTCTTACCTGGCCAATCAGGCTAATGAC ATTAACAATGCTGGGCATGATAAAAGGAGCAGAGATGATAAAGGTGGCAGAATATTGAAAAATGATGAAGGTGGAGGATC TGGAAGAAGATGGGATTTGGAAGGATCGGAGAAAGATGACTCCCCACGTGAAACTGCGAGGATATTAAACAGGGATCTTG ATAGGGAACGTGCTGTAGCTGAAGCCAAGATGTGGGGAGAGAACTGGAGGGAAAAAAGACGACAAAGTGTGCAGGGCAGT TTTGATGGTTCTAATGCCTAG
Protein sequence (LotjaGi5g1v0366100.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPPKGNCQHLKDGLAAVQIAAQTFTFRELAAATKNFRPQSFIGEGGFGRVYKGRLETTAQVVAVKQLDRNGLQGNREFL VEVLMLSLLHHPNLVNLIGYCADGDQRLLVYEFMPLGSLEDHLHDLPPDKEPLDWNTRMKIAAGAAKGLEYLHDKANPPV IYRDFKSSNILLEEGFHPKLSDFGLAKLGPVGDKSHVSTRVMGTYGYCAPEYAMTGQLTVKSDVYSFGVVFLELITGRKA IDSTLPHGEQNLVTWARPLFNDRRKFPKLADPRLQGRYPMRGLYQALAVASMCIQEQAAARPLIGDVVTALSYLANQAND INNAGHDKRSRDDKGGRILKNDEGGGSGRRWDLEGSEKDDSPRETARILNRDLDRERAVAEAKMWGENWREKRRQSVQGS FDGSNA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 6 | 113 | 108 | 4.4E-33 | – | |
PANTHER | 12 | 344 | 333 | 6.4E-199 | – | |
PANTHER | 12 | 344 | 333 | 6.4E-199 | – | |
SUPERFAMILY | 21 | 311 | 291 | 8.5E-81 | ||
ProSiteProfiles | 37 | 314 | 278 | 37.248 | ||
Pfam | 40 | 242 | 203 | 1.9E-44 | ||
ProSitePatterns | 43 | 66 | 24 | - | ||
CDD | 43 | 311 | 269 | 5.72384E-97 | – | |
Gene3D | 114 | 336 | 223 | 8.5E-59 | – | |
ProSitePatterns | 160 | 172 | 13 | - | ||
MobiDBLite | 321 | 369 | 49 | - | – | |
MobiDBLite | 324 | 369 | 46 | - | – | |
MobiDBLite | 385 | 406 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi5g1v0366100.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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