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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0004500 |
| Transcript ID | LotjaGi6g1v0004500.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein kinase family protein; TAIR: AT1G03930.1 dual specificity kinase 1; Swiss-Prot: sp|Q9ZWB3|CKL9_ARATH Casein kinase 1-like protein 9; TrEMBL-Plants: tr|I1LC61|I1LC61_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0004500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:873581..876172) extracted from Lotus japonicus Gifu genome v1.2.
ATGGATCACATTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCTTTTGGGGAGCTTTATTTGGGTAA TAATGCACTTAGTTCAAGTCTTTTTTATCATTATTTGTTTGCTTTCAATATTTTGGACTTCATATTCTGGTGCTTTTATT TTAGGTGTTAATGTGCAAAGTGGGGAGGAAGTGGCTGTCAAGCTGGTGAGTATAGTTATGAATTCTTGACATGATTGTTT TGTGTTTCCATGATATATAGATTGTTGTGTTGTTCTTGATGTGAAACATAGCGCGTGTCACTTGGGCTGTGTTAGCGGTT ATGCTATTTTTGCATGCTGGTTGCTTGACTTTCATTTAGGAGAATATTTGCAGATCTATACATGCTTCTTACACTGATGA AAAACTTCAAAAGGGAAATAGAACTGTCATATGCTCTAGTAGGCATGATCATCAGTCACTATTACTGTAATTATATTTAT ACGGTCTTGGGCATAAAGTTTACACTTTACATCATTATTTGTCTCAAGTTTGTCAATTACAACTTGCATCACAGGATTGC ATGTTCCTATGAGTTTGATTGCTGCTATGATCCCAATGATATGGACGAACACATCACTTGGCCTAGTTGCCCATTTCTGA AAAATAAATCACGAGCCTACCCAAAGTCTGAAGATCCCAAGCCTTACTAGTTCTTTTGTCAACCATTCAACCCTTCCCAA GTCCAAACTATTGTGCTTTGATCTATGGCTGCTAGCACTTGTAGCTTGCGGCTGACGATTTAGAAGAGGTTTGGTGGTGA GTCAGGTTGAGAGGGAGAGAGAGAGAGAGGGTGCATCACAGTCTGACCTTTTTACTGCTTCTGGTTTGTTATGTGTGCAC TGTGCAGTGCTATGTTTTGTTCTGTTATACACTTTTTTTAGGATCCATTTTGTCTCATTGATTTGGAGTATAGTAATATC CAGATAATTTCTTGTCTAGCTTTTTATTTGTGTTTTAGTTCTATTTGTTAGAAAAAAATATTGTATTAATATTATGAGTT GTAACTTTAACGTGAGTTGTCGCTTGTGCCTTGAGCATTTGCAATGTTCTGAAAGCCAGGAGTTGGGCTTGTTTTGGGTC TTCATTTACAATACAACCTTTCTTAAATTTTTGTCTTTTCTTTCATTCTTTTTCATTCCTTTTTTCTTGTCACAACCACT CTAATATAATATAAACAATGGGGTACTAATAATATAATAGTTATGAAATAAATATTTAAATTATTACTTGCATTTGATAT GATTACTTTGTATTAGTGAATTATATTTTTCTTACACTTCTATATATTCGATAGGATCTTATGATCCGTGTTATGATCAC ACGATTTGCAGTCTTTCACCCCCTCTAGATCATAGGTAAGAACTCTATTTTGACACCCTTGGTTTGTCCTGTACTCCTGC ATCTGTAATGATTTTCCTCAAGCTTGGACGATCTGAACATTGGAAGGTGTTTTAGAGTATGGAGTTTTCCCTTTTTGTCT ATACACACGACAGCATGAGTCTGTGGAAGTAGGCACTACCCTTCAGTCCTGGGACTTTCCTTCTGGGTCTTAGAAAAGGA AAAAATGTTAAAAAGGATATAATCTAAGTCAAGAATTTGGTTTACATGTTATTATTTGACATGCAGTTTCTTGCTTCAAG ATTAATACACTTCTACTAAATGTGCTATTAGCCTATGGCATGTTCTCAAAGTTGGATTGCTTGAAAATACTTAATGGAAG TTTTGGCTTTGTGCTTTATGATTGTTATTTGTGCTTGTAGTCCATAGACTCTTTTTGAAGAGCGTAATGTAATACATGTG CCAATACTTTTCCCCTATATTTTTATTTGCTTGTAGGAATCTGTGAAGACCAAGCATCCTCAACTTCTCTATGAATCAAA ATTGTATATGCTTCTTCAAGGAGGAAGTAAGGTTCTTTTTTTTTCTTCCGAATTTATACTTTCTTCAATTTCTTTTATGC AGCCAAGATTTTCATCTGCTAATTTTCATGAAGCGAGCTCATTAGTTTATGAGGTCATCTGATTAATGTGTTATTTTTAT ATGAAGCCGGGATACCTCATTTAAAATGGTCTGGAGTTGAAGGTGACTACAATGTCATGGCTATTGACCTTCTTGGACCA AGTCTTGAAGACTTGTTTAACTATTGCAATAGAAAACTCACTCTGAAAACTGTTTTGATGCTTGCAGATCAGCTAGTAAG TATAGCTTGAATTCAAGCAAATCATACTTTTAACATATAGTTGAAGTATTTTACTAATCTTATACCTAATACCTAGATAA ACAGAGTTGAGTATATGCATTCCCGGGGCTTTCTGCATCGTGATATAAAGCCTGACAACTTTTTAATGGGTTTGGGTCGC AAGGCGAATCAGGTATCTATCACTTTCTTGCAATTATTTTAATGCAGCCTCATCTGGCGACTTACCTCACTGTTTGGTAT TCTTAATGTGTATTTTTAAGAATCTTGTCACCTTGGGGACATGAGCAAACTGAGACCTGAATGTTGTGAACTCTAAATGA GCTGTAGTCTACGGTACCAACCGGGCAGGTGA
CDS sequence (LotjaGi6g1v0004500.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATCACATTATTGGTGGAAAATTCAAGCTTGGGAGGAAGATTGGGAGTGGATCTTTTGGGGAGCTTTATTTGGGTGT TAATGTGCAAAGTGGGGAGGAAGTGGCTGTCAAGCTGGAATCTGTGAAGACCAAGCATCCTCAACTTCTCTATGAATCAA AATTGTATATGCTTCTTCAAGGAGGAACCGGGATACCTCATTTAAAATGGTCTGGAGTTGAAGGTGACTACAATGTCATG GCTATTGACCTTCTTGGACCAAGTCTTGAAGACTTGTTTAACTATTGCAATAGAAAACTCACTCTGAAAACTGTTTTGAT GCTTGCAGATCAGCTAATAAACAGAGTTGAGTATATGCATTCCCGGGGCTTTCTGCATCGTGATATAAAGCCTGACAACT TTTTAATGGGTTTGGGTCGCAAGGCGAATCAGAATCTTGTCACCTTGGGGACATGA
Protein sequence (LotjaGi6g1v0004500.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDHIIGGKFKLGRKIGSGSFGELYLGVNVQSGEEVAVKLESVKTKHPQLLYESKLYMLLQGGTGIPHLKWSGVEGDYNVM AIDLLGPSLEDLFNYCNRKLTLKTVLMLADQLINRVEYMHSRGFLHRDIKPDNFLMGLGRKANQNLVTLGT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 144 | 144 | 7.3E-85 | – | |
| PANTHER | 1 | 144 | 144 | 7.3E-85 | – | |
| Gene3D | 2 | 85 | 84 | 9.1E-37 | – | |
| SUPERFAMILY | 4 | 142 | 139 | 2.19E-40 | ||
| ProSiteProfiles | 9 | 151 | 143 | 21.658 | ||
| SMART | 9 | 151 | 143 | 7.6E-4 | ||
| Pfam | 10 | 136 | 127 | 7.5E-17 | ||
| ProSitePatterns | 15 | 38 | 24 | - | ||
| Gene3D | 86 | 150 | 65 | 5.9E-17 | – | |
| ProSitePatterns | 124 | 136 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0004500.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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