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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0035100 |
| Transcript ID | LotjaGi6g1v0035100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | OTU domain-containing; TAIR: AT3G22260.1 Cysteine proteinases superfamily protein; Swiss-Prot: sp|Q54P70|Y4757_DICDI OTU domain-containing protein DDB_G0284757; TrEMBL-Plants: tr|I3S3E1|I3S3E1_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0035100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:6593504..6599109) extracted from Lotus japonicus Gifu genome v1.2.
CTTACGACAGACTCCTAGTCAAATGTCAAAGTTAAATTAGTTGCTTCTTAATAGAGCGGTGGCGCAGCCTCGGCAAACTC AACCAAACGCAACCGTGTTTTTGGTTTTTCTTTGCAAACGCTTTTGACACTTTCCCTCCTACTTTTCTGTGCTTTTACTT TCCCTCCTTCGTTTCTTCACTTCGAAGTTTTCGCTTTGTTTCATCTTCCATTGATCTATTACAATTCTCCTCTGAGCTTC GTGTCCACCATTTTCTTCTGTCTACTGCAACAGTTACAGACCCAAGGTAGCTTATCTAACACGCACGCGACTATTCCAAA ATTTTCTGCTTCTTTCGTTTGGAAACGAAGGTTTTGATTTGGTAATTGGTAGGCATGGCTTTATTTCATACAATTTTTTC GTGTTTCTTCTTGATCTTACTATTTTTGTTTATCCTTTATTCATTTTGATTAATTGAGGTTTTGGGCTTAGGCTTAGCTT CCATTTGTTCTTTAATTTATGTAAAAGTTGTATTTATATTGATATTATATATCATTGATTGATTTTTTTGTTTTTGGATT CTTGAATTTCTAGGTTACTTAAGGTGACATATTATTATTAGGTGAGTTAGGAAAGTATGAGTGAGAGCTTGAGGAATGCA AGTGGGAGCTCCAGCTCGAGTTTGAACAGCAGCTTCCAGGACACAGAGGATGATCAAACTATAGCAAGCATATTAGCAGA AGAGGAAAGTCTCAAGGAGGAAAACAGGCTTGGCAAGCGGCTTTCCCATTTAAATTCCATTCCGGTACTAATCATGTTTT CATGTGTGGTTAATGTTTTCTTAACCTTGAGAAACTGAGGAATGAATGAACCCTTATCAAATTTAGGGTGTATTTGGGTA ATTAGTTTAATTATATGCTTATATCATTAAGTATTCAGCACATAAGTGTTTATGTATAAATTTATTACTTACGGTGTGTT TGGGTAAAAGCTTAGTTAAGCACTTATAGCAATAAGTGCTCAACACATAAGCGCTTATTCAGAAGCTAATTTGAGAAGCT TACTGAAATGAGTTCATAATAGGTTATAGGAAGGTATAAGCTCATATCCATAAGCTAATCTTAGTAGCTTATGAAAATAA GCTCCAAACAGCTTATAGGCAAGTCATAAGTTATTTATATAAGCTCTCTCAAACACTTGCATAAGCTCTTTTGGTATTTT ATAAGTTAAATTCAAATAAGCTCTTCCACATGCACATGTAGGAGATAATGGAATTCAATAGATGCTTGACAGGGCAAACC AAATGTTAATATGGAACATCCTAGGAAGGAGACAGGAATTGTTCTGGTTGGGCTTGGACCATGAACAAATTCTACAACTC TTTTTTGTACAAATCTTTGAATAACCGAAGTGAAAGTAAGGAGGCACTTTTTGTAACAGTTATGAAAACAAGGAATTAAA ATAAAATTCATTCTCTCAAATCGAAGAGGCTCTTAGCATCTGAGAGTTCCTCATTAGTTGCAAAACACACTTTGAACTGA ATATACCACATTAGAATCTTCTTAGAAGAATACTAAACTCAATCTTCAAACCTGCAATTCTAGATGCTCCTTATTAGAAT AATAAGGAGAGAAGCCTTTGTATTCTGGTTGTAACTTTACCTTACAATTATTATTTAACCTTCAAAAACCCTTCTTCTCT CGTTAAGAATATGTTATCTGCTTTTTCTTCTATTTGTATATTGTTATCTGCATTGAGAATTTGGGATGAGAATACTAATT CATTATGTTGGCAGCACACTCCCCGTGTTAATGGAGAGATTCCTGACGTAAATGATGCAACACAGGACCACGGGATGCTT TCTGAAAGGTTGCAAACCCTAGCTTGATGTACAGTTATTATTATTTGTTTCATTACTAGTGACATTTGTTTTCACATTTT TTGAAAAGGTAGTCTAAGTTTTAAAATCAAGTTATAACTTGATTGAGAAATTTGTTCAATAGAGAGTTATAATCATGTCA ATGATGACAGTTCAGAAGCATGGGAAGGAGCATGGTTGATGTGAAACAAAATGTTTATTTTTGTATGCATAAAGTATTTG TTTTAGTTAATAGTTATGCTTCATTTTATACAGGTTAGTTACATATGGTTTGACAGAGCTACAAATGGAGGGTGATGGGA ATTGCCAGGTTTTCTCCTTTTTTTTTCCCCCATTATTTCGTACTTTTGTTACTTTCTTATATGCTCCTTCTCCTTTGATA TATTTTTATTCTAACATGTGAAATCTTTACTGGATAGTTTCGAGCTTTGGCGGATCAGTTGTTCGGTAATCCTGAATACC ACAAGCATGTAAGGAGGCAGGTTATCAAGCAGGTATGTTATTTCAGTGCACTAATTTCTTTGTGTATTTTGAAAATTTTC AATGCAACATGGTGTGGTCGGTCCCCACCCTTTGTTTCTTACTTCAAGTTATTTATGTAAATTGGAATTGTACAGTGTTT TAATAGTATTCAGATTTCTGAGAATGAGATGTTAAAGTCTGTTTCTTAATTTTTCCTTTTTTGGCTTCTTTTGTTTTCCT CAGCTAAAGCATCACAAAAAATTGTATGAAAGTTACGTTCCAATGGAGTACAAAAGCTACCTGAAGAAGATGAAAAAGTG AGATATCAGTGCTTATTAATCTTGCTTTCATTTTTACAAAATTAGAGAGCATGTAGTATTGAGGGTGAACACTGAACACT AATTTTATATTTGCATACTATCTTCTGATAGATCAGGGGAGTGGGGAGATCATGTTACTCTACAAGCAGCTGCGGACCGT GTACGTTATTTCAATTCTGTGAATATCTTTTTTATCTAAAATCTTTACTAGTTTCATCTTTTTACCCCCTGAATTAGACA TTTGTTATCATTCCGAGAACCTTGTCATACAATTAAGGGAACAATGAACCATTATATACCTAATAAAACCAGGACCACAA TTACAGGATACTGAATCAACAAGTTACATTATAGTAACATCAATACTTTATGTTTTCTATCTATAGCGGTCTAGGGGTTG GCCACTCTAGGCCATTATCCCGGGATTGACAACTATGGTCCACATAGCGATATAACGTAGTGGAGTTTAACTTCACTGTG AGCCATGCAAAAATGTTGGACTAGAAAAGCTAAATCATCCAAACCAAAATGTTGGACGAGAAAACTAAGTCGTCCAAACC AAGCCTAAGGAGACTGCTTTAGATAGTATGCAAGTTTGTGAAGGCAACACAGTAGGCTACTTCACACATTGAGTAAATAA GGACGCTAAGGAAGCTCAATGTGTTATTTAAGCCATGAGGCTCTTATGCTTCTTGTTTTGGTTGGGCTTGAGTTGTGACA ATCTTGTAATTTTCTACTTTTGGGGTTCTCGTTGTGTTTACTTTTATTGAGAAGTCTCACATAGACTAGAGATATGGCTA AGATGCCCTTATATAGGGAAGGCAATCCTCACCTCTTGAGCTAGCTTTTGGGGTAGAGTTAGGTCTCCCAAATTCTAATA ACTTTCTATTCTATTTTTAATTTCTACATTTATTTATTTGAAGTTTTAATTCTCAGATTTGCCTTCTGTTTATTGTTCAA AATTGATTTCTGACTATTCATGGCCTTTCCTTCAGTTTGAAGCCAAAATTTGTTTAGTCACCTCCTTCAGAGACACTTAT TATATTGAGATCCTTCCGACTAACAAAAGACTCACCAGAGGTATGTTTTGTTAATGTTGCTTTCTTTAACAGTTTGTTTG TCTGTCCTTATTTGAAATTCTCCTTTAGCACTTCCATTGTCTTAAGTCTTTATTTTGATGTCAATGTTCAAGAGTCTGTT CCCTAGTAAATTTTGGTTCTCCCTGGAGACAGAATGAAAATTCCTTTAGCTTGTTCTTTCAGTTACTTTTGCAATGAATT CTCTGTTCCATGATTACAGTACTAGAGCACAAAAGATTCTTTTTAAGCTGCTATATTGAGAGCCTTAAGGTTGTTACTTG TTAATCATCATATTTCCTATGAAGGAGAAGTTTAATTATCACTGAAAATGTTCAGCAACTAATTTTTCATCTTGACAAAA GGTGTCATACTGTCATAACTTGGAATTTTTCATCTTAACATGGGAAAAAATTTAATTTGAAAGGTACCGTAAAGTAATGG TGTCATACTGTCATAACTTGGAACTTTGTAAGATCTACACTCAAATCATGTAACATTCTCCTGCTAGTTTAAGTTACACT GTACCAAAGCCTGTTTGATATAGTGGTTAGCGGTCCTCACCACTTGTCATAATAATTAAGTTAATTCTGATGTTTATATA ATAGTCTTTTTGAGATCTTAATATCATTCTTGAACTTCAAAGTAGATGTGCTGTTGGATATATTGGTTCTTTAATGATTA TATTTATATCATAAATGTCTGAACACAAAATAAAAGTATTTTTCGTCCTTAGCTTTAAGCTTAATCTTTAACTCCCAGCT TCATGTTTCTGACTTCTTAGTTAATAATATCTGACTAGATTTTTTTTGTATTGAAGAGCTATGGCTTAGCTTTTGGAGTG AAGTGCACTATAACTCATTGTATTCAACCGGAGGTGATATTCCTGTCAACTTTCAAATGGATTTTTCTTGCTACAAATAT CTTCTATCAAACAATAAGCTTATCTTTTATTTGTTCAATGAATTTACAGATGTTCCTTCTAGAGCACCCAAAAAGAAGTA TTGGCTCTTTTAGACAGATGACAGATTATGAAATCATGAGAAGAACATAGTTTATTTTTAATATTTAGCGAGGAGCATAT TTGTACAAATTACGTTATACGTATAGCTAAATTTAGTGAACTTGTTGTACAGATCTAATTTTCCTGCCGAGTGCAATACT TATGTTAGAATACTAAAGTATAGAGTATAGAGTATAGACTGATAAAAAACACCAGGGAAACTCATAAGGGCTGAAAGTAG GTTACAGAGAAATGAGCTATGGATACTGGAAGAACATGATGCAACTATTTGTTAAGTCATCCATCTACGAAGTATGAAAC CTTATAAAAAAGGGGATCTATGTTCCAAACAATGATGCAGGAAAAGAAGTTCCCAAAAATCAGTGGGACCATGAGCAATG CAAAAAGAAACAGATGAACTTAAAAGCTAAACTTTATCTAATATGTTCCTTGAGTGAATCTGAATATGAAAAAGTCAACA ATATGTCAACAACTAATGATATATCAACAATATATCAACAATCTCATGAAGGGACTGACACAATTAAGCAAAAAAAAAAT TATTTTGCTTGTTGGGCAGTATGAGAGTTGCAAAATGAAGAAAAATGAATCAATTGATCACATGTTTGCAAAGATTCCAA ACCATCATCAGTGGGTAAGGGGTCTTGGAAGAACCTATAAGAATGTTAATTTGAATCACAAGATTCTAAGATGTTTTCCC AATCGATGGAGACATATAATCACAACCACAAGACAAGCCAAGGACATTAACCTTGAAATGGATCAAATTCTGGGTGCTCT AAAGGTTCAAGAGATTGAGCTTGAAGAGGATGATAGCAAGAAGCCTAAGTCAGTGGCTTTAAAGTTTCGAAACCAAGAAC AATGTG
CDS sequence (LotjaGi6g1v0035100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTGAGAGCTTGAGGAATGCAAGTGGGAGCTCCAGCTCGAGTTTGAACAGCAGCTTCCAGGACACAGAGGATGATCA AACTATAGCAAGCATATTAGCAGAAGAGGAAAGTCTCAAGGAGGAAAACAGGCTTGGCAAGCGGCTTTCCCATTTAAATT CCATTCCGCACACTCCCCGTGTTAATGGAGAGATTCCTGACGTAAATGATGCAACACAGGACCACGGGATGCTTTCTGAA AGGTTAGTTACATATGGTTTGACAGAGCTACAAATGGAGGGTGATGGGAATTGCCAGTTTCGAGCTTTGGCGGATCAGTT GTTCGGTAATCCTGAATACCACAAGCATGTAAGGAGGCAGGTTATCAAGCAGCTAAAGCATCACAAAAAATTGTATGAAA GTTACGTTCCAATGGAGTACAAAAGCTACCTGAAGAAGATGAAAAAATCAGGGGAGTGGGGAGATCATGTTACTCTACAA GCAGCTGCGGACCGTTTTGAAGCCAAAATTTGTTTAGTCACCTCCTTCAGAGACACTTATTATATTGAGATCCTTCCGAC TAACAAAAGACTCACCAGAGAGCTATGGCTTAGCTTTTGGAGTGAAGTGCACTATAACTCATTGTATTCAACCGGAGATG TTCCTTCTAGAGCACCCAAAAAGAAGTATTGGCTCTTTTAG
Protein sequence (LotjaGi6g1v0035100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSESLRNASGSSSSSLNSSFQDTEDDQTIASILAEEESLKEENRLGKRLSHLNSIPHTPRVNGEIPDVNDATQDHGMLSE RLVTYGLTELQMEGDGNCQFRALADQLFGNPEYHKHVRRQVIKQLKHHKKLYESYVPMEYKSYLKKMKKSGEWGDHVTLQ AAADRFEAKICLVTSFRDTYYIEILPTNKRLTRELWLSFWSEVHYNSLYSTGDVPSRAPKKKYWLF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 27 | 27 | - | – | |
| PANTHER | 3 | 223 | 221 | 1.3E-125 | – | |
| PANTHER | 3 | 223 | 221 | 1.3E-125 | – | |
| MobiDBLite | 50 | 69 | 20 | - | – | |
| Gene3D | 69 | 214 | 146 | 3.2E-39 | – | |
| SUPERFAMILY | 73 | 211 | 139 | 1.08E-32 | ||
| ProSiteProfiles | 87 | 211 | 125 | 15.319 | ||
| Pfam | 94 | 182 | 89 | 1.3E-12 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0035100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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