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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0139700 |
| Transcript ID | LotjaGi6g1v0139700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock protein 90; TAIR: AT5G56000.1 HEAT SHOCK PROTEIN 81.4; Swiss-Prot: sp|P36181|HSP80_SOLLC Heat shock cognate protein 80; TrEMBL-Plants: tr|T2AUM9|T2AUM9_POPTO HSP90; Found in the gene: LotjaGi6g1v0139700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:40657934..40660597) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGATACCGAGACGTTCGCGTTTCAGGCGGAGATCAACCAGCTTCTCAGCCTCATCATCAACACGTTCTACTCTAA CAAGGAGATCTTCCTTCGTGAACTCATCAGTAACGCCTCTGATGTGAGTTTTCGTTCTCCGAATTTCCTAGTTTTTTTGA TTCTAACATGCTCGTTTTTCTCGATCTGGATTTCGTTTCTGTTTTTTGTTCAATTTGGCTCATGTTCATGCGATCTACGA TGAGTGTGAATTGAATTGTTTAAATCTGTTGTTTTCTGATGTGTTGATCTCATCCGCTATTGGATTTTGCTCAGGAATCT AGGTTTTCAAAAGATTTTAGCCTATTTTGTATATCTGAATGCTGTTGAATACTTTGCTTTGGTTTCGGAGTGTGATTCAT GAATTTTGTTTGTTTTTGTTGCTGTATCTTCATATCTATAATAGTTATAGCATTTTCCTTGATTGTAGTTGATTGATTGA GTCGAATTAATTGGAAATTGTGGCTGTATTAGAAATTTTGTTTCAGTTGATGAATTTGTTCTGTTGGATGGTATTTGATT GTGATTGTGGCTATGTAATGTTGCAGGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACAAGAGCAAGCTCGATGGA CAACCCGAATTGTTCATCCATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGACAGTGGTATCGGCATGAC CAAGGCTGGTAAGGACTCAAAATGAGTTTCCATTGAATCGTTTTTTCTTGTTTAGTTGCAATGTATGGTTGTTAATTGGT TCTAATCTGCGTTTTTGTTTATGTTATTCCAGATTTGGTGAACAACTTGGGTACAATTGCAAGGTCTGGCACCAAGGAAT TCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGGACAGTTTGGTGTTGGTTTCTACTCGGCCTATCTGGTT GCTGAGAAGGTTATTGTTACCACCAAGCATAACGATGACGAGCAGTACATTTGGGAGTCTCAAGCTGGTGGGTCTTTCAC TGTTACCAGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAGATCACCCTCCATTTGAAGGAGGACCAGCTTGAGTACC TTGAGGAGCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGAGTTCATCAGCTACCCAATTTCTCTGTGGATTGAGAAG ACCACTGAGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGAAGAAGGATGAAGAGGGTAAAGTGGAGGATGTTGACGA AGAGAAGGAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAGGTGTCTCATGAATGGTCTTTGGTGAACAAGCAGAAGC CTATCTGGATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATATGCTGCTTTCTACAAGAGTCTCACCAATGACTGGGAA GAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTGAGTTCAAGGCTGTTCTCTTTGTACCCAAGAGGGCACC ATTTGACCTCTTTGACACAAGGAAGAAGCCTAACAACATCAAGCTCTATGTGCGACGTGTCTTTATCATGGACAACTGTG AGGAGTTGATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGTTGATTCTGAGGATCTCCCACTGAACATCTCCAGAGAA ATGTTGCAGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATTTGGTTAAGAAGTGTGTGGAGCTTTTCTTTGAAATTGC TGAGAACAAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCTAAGAATTTGAAATTGGGTATTCATGAGGATTCACAGA ACAAGAACAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAAGAGTGGTGATGAGATGACCAGCCTCAAGGACTACGTG ACCAGGATGAAGGAAGGTCAGAATGATATTTACTACATTACTGGTGAAAGCAAGAAAGCTGTTGAGAACTCTCCATTCTT AGAGAAGTTGAAGAAGAAGGGATATGAGGTACTTTACATGGTTGATGCTATTGATGAATATGCTATTGGTCAACTTAAGG AATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTTGAAACTTGAAGAAAGTGAAGACGAGAAGAAGAAGCAA GAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGAAGGATGTGTTGGGCGACAAGGTGGAGAAGGTTGTGGT TTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGCGAGTATGGATGGACCGCCAACATGGAAAGGATCATGA AAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTCAAGCAAGAAGACAATGGAGATCAACCCTGAGAACCCC ATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACGACAAATCTGTGAAGGATCTTGTCCTCTTGCTCTTTGA GACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAACACTTTTGGCAACAGAATCCACAGAATGTTGAAGCTTG GATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACATGCCCCCACTTGAGGAAGCAGATGTTGATGCTGAGGGT TCCAAGATGGAAGAAGTTGATTAA
CDS sequence (LotjaGi6g1v0139700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAATCTAGGTTTTCAAAAGATTTTATTGATGAATTTGTTCTGTTGGATGGTATTTGATTGTGATTGTGGCTATGTAAT GTTGCAGGCTTTGGACAAGATCCGTTTCGAGAGTCTCACAGACAAGAGCAAGCTCGATGGACAACCCGAATTGTTCATCC ATATCATTCCTGACAAGGCAAACAACACTTTGACCATTATTGACAGTGGTATCGGCATGACCAAGGCTGATTTGGTGAAC AACTTGGGTACAATTGCAAGGTCTGGCACCAAGGAATTCATGGAAGCCTTGGCTGCTGGTGCTGATGTTAGCATGATTGG ACAGTTTGGTGTTGGTTTCTACTCGGCCTATCTGGTTGCTGAGAAGGTTATTGTTACCACCAAGCATAACGATGACGAGC AGTACATTTGGGAGTCTCAAGCTGGTGGGTCTTTCACTGTTACCAGGGATTCTGGCGAGCCTCTTGGCAGGGGGACTAAG ATCACCCTCCATTTGAAGGAGGACCAGCTTGAGTACCTTGAGGAGCGCCGGTTGAAGGACTTGATTAAGAAGCATTCTGA GTTCATCAGCTACCCAATTTCTCTGTGGATTGAGAAGACCACTGAGAAGGAGATCTCTGATGATGAGGACGAGGAAGAGA AGAAGGATGAAGAGGGTAAAGTGGAGGATGTTGACGAAGAGAAGGAGAAGGAAGAAAAGAAGAAGAAGAAGATTAAGGAG GTGTCTCATGAATGGTCTTTGGTGAACAAGCAGAAGCCTATCTGGATGAGGAAGCCAGAAGAGATTAACAAGGAGGAATA TGCTGCTTTCTACAAGAGTCTCACCAATGACTGGGAAGAGCATTTGGCTGTCAAGCACTTCTCTGTTGAGGGTCAGCTTG AGTTCAAGGCTGTTCTCTTTGTACCCAAGAGGGCACCATTTGACCTCTTTGACACAAGGAAGAAGCCTAACAACATCAAG CTCTATGTGCGACGTGTCTTTATCATGGACAACTGTGAGGAGTTGATGCCTGAGTACCTGAGCTTTGTCAAGGGTATTGT TGATTCTGAGGATCTCCCACTGAACATCTCCAGAGAAATGTTGCAGCAGAACAAGATTTTGAAGGTTATCCGTAAGAATT TGGTTAAGAAGTGTGTGGAGCTTTTCTTTGAAATTGCTGAGAACAAGGAGGATTACAACAAGTTTTATGAAGCTTTCTCT AAGAATTTGAAATTGGGTATTCATGAGGATTCACAGAACAAGAACAAGCTTGCTGAGCTTCTCAGGTATCACTCCACAAA GAGTGGTGATGAGATGACCAGCCTCAAGGACTACGTGACCAGGATGAAGGAAGGTCAGAATGATATTTACTACATTACTG GTGAAAGCAAGAAAGCTGTTGAGAACTCTCCATTCTTAGAGAAGTTGAAGAAGAAGGGATATGAGGTACTTTACATGGTT GATGCTATTGATGAATATGCTATTGGTCAACTTAAGGAATTTGAGGGCAAGAAGCTGGTGTCTGCTACCAAGGAAGGTTT GAAACTTGAAGAAAGTGAAGACGAGAAGAAGAAGCAAGAGGAACTGAAGGAGAAGTTTGATGGTCTCTGCAAGGTGATGA AGGATGTGTTGGGCGACAAGGTGGAGAAGGTTGTGGTTTCTGACCGTGTGGTCGACTCACCTTGCTGTCTTGTGACCGGC GAGTATGGATGGACCGCCAACATGGAAAGGATCATGAAAGCTCAAGCTTTGAGGGACAGCAGCATGGCTGGGTACATGTC AAGCAAGAAGACAATGGAGATCAACCCTGAGAACCCCATCATGGAGGAGCTCAGGAAGCGAGCTGATGCTGACCACAACG ACAAATCTGTGAAGGATCTTGTCCTCTTGCTCTTTGAGACTGCCCTTCTCACATCTGGCTTCAGCCTTGACGATCCCAAC ACTTTTGGCAACAGAATCCACAGAATGTTGAAGCTTGGATTGAGCATTGACGAGGATGCAGGTGAAGCTGATGCTGACAT GCCCCCACTTGAGGAAGCAGATGTTGATGCTGAGGGTTCCAAGATGGAAGAAGTTGATTAA
Protein sequence (LotjaGi6g1v0139700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNLGFQKILLMNLFCWMVFDCDCGYVMLQALDKIRFESLTDKSKLDGQPELFIHIIPDKANNTLTIIDSGIGMTKADLVN NLGTIARSGTKEFMEALAAGADVSMIGQFGVGFYSAYLVAEKVIVTTKHNDDEQYIWESQAGGSFTVTRDSGEPLGRGTK ITLHLKEDQLEYLEERRLKDLIKKHSEFISYPISLWIEKTTEKEISDDEDEEEKKDEEGKVEDVDEEKEKEEKKKKKIKE VSHEWSLVNKQKPIWMRKPEEINKEEYAAFYKSLTNDWEEHLAVKHFSVEGQLEFKAVLFVPKRAPFDLFDTRKKPNNIK LYVRRVFIMDNCEELMPEYLSFVKGIVDSEDLPLNISREMLQQNKILKVIRKNLVKKCVELFFEIAENKEDYNKFYEAFS KNLKLGIHEDSQNKNKLAELLRYHSTKSGDEMTSLKDYVTRMKEGQNDIYYITGESKKAVENSPFLEKLKKKGYEVLYMV DAIDEYAIGQLKEFEGKKLVSATKEGLKLEESEDEKKKQEELKEKFDGLCKVMKDVLGDKVEKVVVSDRVVDSPCCLVTG EYGWTANMERIMKAQALRDSSMAGYMSSKKTMEINPENPIMEELRKRADADHNDKSVKDLVLLLFETALLTSGFSLDDPN TFGNRIHRMLKLGLSIDEDAGEADADMPPLEEADVDAEGSKMEEVD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 23 | 23 | - | – | |
| Hamap | 1 | 651 | 651 | 24.292 | ||
| PANTHER | 29 | 230 | 202 | 0.0 | ||
| PANTHER | 29 | 230 | 202 | 0.0 | – | |
| PIRSF | 29 | 686 | 658 | 1.9E-235 | ||
| SUPERFAMILY | 29 | 200 | 172 | 1.25E-56 | ||
| CDD | 30 | 189 | 160 | 4.92075E-92 | – | |
| Gene3D | 30 | 197 | 168 | 4.7E-84 | ||
| Pfam | 47 | 168 | 122 | 1.9E-11 | ||
| PRINTS | 63 | 80 | 18 | 8.4E-57 | ||
| PRINTS | 81 | 98 | 18 | 8.4E-57 | ||
| PRINTS | 106 | 128 | 23 | 8.4E-57 | ||
| PRINTS | 157 | 174 | 18 | 8.4E-57 | ||
| Pfam | 171 | 673 | 503 | 7.4E-235 | ||
| PRINTS | 175 | 193 | 19 | 8.4E-57 | ||
| Gene3D | 198 | 239 | 42 | 4.7E-84 | – | |
| MobiDBLite | 202 | 235 | 34 | - | – | |
| MobiDBLite | 204 | 225 | 22 | - | – | |
| Coils | 214 | 244 | 31 | - | – | |
| PANTHER | 232 | 686 | 455 | 0.0 | – | |
| PANTHER | 232 | 686 | 455 | 0.0 | ||
| Gene3D | 249 | 422 | 174 | 8.7E-81 | – | |
| SUPERFAMILY | 250 | 505 | 256 | 1.97E-108 | ||
| Gene3D | 423 | 505 | 83 | 1.6E-38 | – | |
| Gene3D | 506 | 654 | 149 | 7.6E-68 | ||
| Coils | 509 | 529 | 21 | - | – | |
| SUPERFAMILY | 529 | 650 | 122 | 2.09E-39 | ||
| MobiDBLite | 660 | 686 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi6g1v0139700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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