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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0178500 |
| Transcript ID | LotjaGi6g1v0178500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent protein kinase, putative; TAIR: AT5G12180.1 calcium-dependent protein kinase 17; Swiss-Prot: sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17; TrEMBL-Plants: tr|A0A072TK46|A0A072TK46_MEDTR Calmodulin-domain kinase CDPK protein; Found in the gene: LotjaGi6g1v0178500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:47036974..47040809) extracted from Lotus japonicus Gifu genome v1.2.
CAATATTCACCAATCACCACCTTTTGCTATTCTCATCCTATATCCTTCTTACTTTCTCTTTCCTTAAGATCATTTTCACT TTTTTGTTCCTCCTCCCTTCCTTCCACCATGGGCAACTGTTGCTCCCAAGCCAACGCCGGCGACGCTCCCGAAGCAATGC CAGCCGGCGCCGACAAGGGAGAAACCAACCAAAAAAGCAGCAACAACCATGCAGGAGGAGACAACCCTGCCACCACCACC GACCCTACCACCCCACCACCAACAACATCCAAGCCGTCACCCTCACCCTTGCCTACTCCTCCTTCCTCAAAACCCACCAA GGCCGCCCCCGTCGGTCCGGTCCTGGGGCGGCCGATGGAGGACGTCAGGGCGACATATAGCATGGGGAAGGAGCTAGGGA GGGGGCAGTTTGGCGTGACTCACCTTTGCACCCACAAGACCACTGGACACCAATTTGCATGCAAAACCATTGCCAAGAGG AAGCTGGTGAACAAGGAGGACATAGAGGATGTGAGAAGGGAGGTGCAAATCATGCACCATCTTACAGGTCAACCTAACAT TGTGGAGTTGAAGGGTGCCTATGAGGATAAGCAATCGGTGCATTTGGTGATGGAGCTTTGTGCTGGTGGTGAACTCTTTG ATCGTATCATTGCTAAGGGACATTACACAGAACGCGCTGCGGCTTCTTTGTTGAGAACGATTGTGCAGATTGTTCATACG TTTCATTCCATGGGGGTTATTCATAGAGACCTTAAGCCTGAGAATTTCCTCTTGTTGAATAAGGATGAGAAGTCACCCCT CAAGGCCACTGATTTTGGTCTTTCAGTTTTTTACAAGCAAGGTTTAATTTATTTCTTACTTCTATCTCATCTCTATATAT TTCTCTTTTAACCATGAGATGTCTGTGCTGGTTGCTCATCTCGTCCCTTAAGCATGAAGTCCGAGGTTCGATCATCACTT GTGAGAATGAAACACATTTCATAGCCAACCTTTTGAGATTTTGTGCAAAATCCTGTCCCATTTGGTGCTCTTTCCATTCA GTCTTCCACCAATTAAGTTTGCTCCCATGTAGGCATGAATATGACAATTATAATTTCACATGAGTGATTTATAAATGAAA TCACGATTTGATTGATGAGGACATAGAAGGAGACACCAAATAAGGATAGGGGGCTTAAGTCTCATTTCCCTATCTCATTT TCAGTGTTAACTAAAGTATCCCACAACTGATAGTTATGAGACTAATCTCTCGCCCCACTATCAGCTGATCAATGAGTTCT TTCCATTCACAAGTGTTGAGAATCGAACCCCAACCACTTACTTAAAGGACGAAGTGTTAAACCACTACGCAACTCACTTG ATTATTCTACTATCTCATTGTTAATCGCTAAAATGATAATTTCAAACCTCAATATTATATGTCATATTCATTACACTAAA GAATCACTTACTGGTCAAATATGACAGAGGTTAAGTTTAGGAGGGATGGAAAAATTTCTTTTTGTATTAATTCTGGTATA AGAGAGTTCATTTACTCATTTACATATAACAGAATCTTGGGTCTTCATATGCTACATGAAGCAAATTTTAATAGCCAATT TATGCTTTTGACAGGGGACACATTCAAAGACATTGTTGGAAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGGAGAT ATGGGCCAGAAGTTGACATATGGAGTGTTGGTGTCATGCTATACATTCTTCTATCTGGTGTCCCTCCATTTTGGGCAGGT TTATATTTCATCTTGTTATTTTCATATAACAATCTCTTAGTACAGAAAATTGTTTTGAAGAACAAAGATAAATGATTATT TATGTCAAATACTTTCTTCTAAATTTAATGCATAGCTTGAAATTAACTGAAAAAACAATGAATTGGTTTGACAGAATCAG AACATGGTATATTCAATGCCATCTTAAAAGGCCACGTTGACTTCACAAGCGACCCATGGCCTTCAATTTCACCTGCAGCA AAAGATCTTGTAAGGAAAATGTTAAATTCAGATCCCAAACAGAGACTCACAGCACAAGAAGTTCTCAGTAAGTGACTTTT TTTACCTCACTTTCAACTCATTTGAAGAAAACAAAATGGTTGAAGAATTCATTTACAATTTCATGATTGAAACACAGATC ATCCTTGGATCATGGAGGATGGAGAAGCACCAGATAAACCTCTTGACAATGCTGTGCTCAATAGGCTCAAACAGTTCAGA GCAATGAACCAATTCAAGAAAGTTGCACTAAGGGTACTTGTTGATTTGCCTTAACTATAATGAATATTTTACTTTTTCAC ACCCTTTAAATAAAATCACTCATTCCAGCAATTCTAACTCTAAATTTACATTTGAAAAGGTCATTGCTGGCTGTTTATCA GAAGAAGAAATCATGGGGTTGAAGGAAATGTTTAGAGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCT AAAGCAGGGGCTTGCAAAACAGGGGACCAAGCTAACAGAGCAAGAAGTTAAGCAGTTAATGGAAGCTGTAAGTTATCCTT CATTTCTGAAAGCCAAAACACCACTAAGCCAAAAACACATAGATTTTCTCATTCTTCTACAAATTACAGGCTGATGCTGA TGGCAATGGAACCATAGATTACGACGAGTTCATCACAGCAACAATGCACATGAACAGAATGAACAGAGAAGAACATCTTT ACACTGCCTTCCAATACTTTGATAAAGATAACAGCGGGTAAGAAAACCAACTAGGTTCAAGATAATATATTTTCTGAACA CCCTTTTGTCAACTCCTTGGTGCTTTATTAAAATAAGTTGAGGTTCTAAATTTCTGATCTCATTTTTGTACCATATAAAT GAATCAGGTTCATTACTACTGAAGAACTAGATCAAGCTCTCCATGAATATAACATGCATGATGGTAGGGACATCAAGGAA ATCCTTCATGAAGTTGATGGAGATAATGTAAGTATATGTTTGGATCAACTTGGCTTTCATCAGTATCAATTCTAAAACCC ATAAGCTAATCACATAAGCTTTTCCATATAATTGATTCTGGTTTCAGAATGAATTGTACACGTTTTTACAAACATGCAAT CTAATGTTGCATTGTTTATTTCTTGTGGAAATTCCTTTCATATTATCATATAGATCATATAGATGTTTGTCCATGGTTAG TGATGACAATGAAATCTGTGACATGTGTGCTGCAGGATGGTCGCATTAACTATGATGAGTTTGCGGCGATGATGAGAAAA GGAAATCCAGAAGCTCTTACTAAGAAGAGGCGTGATTCGTTTGTTTCACATTAGTGAAGGGTCTCACAGGGAAGATGTTG AAAAGGATTCATCTGTTTCAGCCCTATGTTTTTCTTTGATGGGGTGAAGAGAAGAATGATCATGGGGTACATGTTGTATA TTGCAATGGTTTTGTTGGTTTGAGAGTGTCAATGGTGGAAATAAAACATTGAATCAAGAGGGGGGAGGGAGAACACAAAC TAACCTTTGAGAAATGTGAAAATATGCTAGGTATATATTTGGTTGATTAACATTTTTTTTTACAGTTCCCCTTTTCTGTG AGATACTGTAACAAAAGTCATGTAATGATATTGCTCACTTAATTAGGAATGAAAAAAAAGGGTGGTTATTTATGTACTAA TTCCTTCTAAATGCTAGGTACAAGTATATTTGTACATTTATGTTAATGCAGACAGGAAATTTGGCATGTATTTCTTGGCC TTTCATGTTAAGAAAAAACTAAGATATATATGGGATTGTAAATTGTTGATTAATTCTGAAATTAGGGTGTACCGTG
CDS sequence (LotjaGi6g1v0178500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGCAACTGTTGCTCCCAAGCCAACGCCGGCGACGCTCCCGAAGCAATGCCAGCCGGCGCCGACAAGGGAGAAACCAA CCAAAAAAGCAGCAACAACCATGCAGGAGGAGACAACCCTGCCACCACCACCGACCCTACCACCCCACCACCAACAACAT CCAAGCCGTCACCCTCACCCTTGCCTACTCCTCCTTCCTCAAAACCCACCAAGGCCGCCCCCGTCGGTCCGGTCCTGGGG CGGCCGATGGAGGACGTCAGGGCGACATATAGCATGGGGAAGGAGCTAGGGAGGGGGCAGTTTGGCGTGACTCACCTTTG CACCCACAAGACCACTGGACACCAATTTGCATGCAAAACCATTGCCAAGAGGAAGCTGGTGAACAAGGAGGACATAGAGG ATGTGAGAAGGGAGGTGCAAATCATGCACCATCTTACAGGTCAACCTAACATTGTGGAGTTGAAGGGTGCCTATGAGGAT AAGCAATCGGTGCATTTGGTGATGGAGCTTTGTGCTGGTGGTGAACTCTTTGATCGTATCATTGCTAAGGGACATTACAC AGAACGCGCTGCGGCTTCTTTGTTGAGAACGATTGTGCAGATTGTTCATACGTTTCATTCCATGGGGGTTATTCATAGAG ACCTTAAGCCTGAGAATTTCCTCTTGTTGAATAAGGATGAGAAGTCACCCCTCAAGGCCACTGATTTTGGTCTTTCAGTT TTTTACAAGCAAGGGGACACATTCAAAGACATTGTTGGAAGTGCATATTACATTGCACCTGAGGTCTTGAAGAGGAGATA TGGGCCAGAAGTTGACATATGGAGTGTTGGTGTCATGCTATACATTCTTCTATCTGGTGTCCCTCCATTTTGGGCAGAAT CAGAACATGGTATATTCAATGCCATCTTAAAAGGCCACGTTGACTTCACAAGCGACCCATGGCCTTCAATTTCACCTGCA GCAAAAGATCTTGTAAGGAAAATGTTAAATTCAGATCCCAAACAGAGACTCACAGCACAAGAAGTTCTCAATCATCCTTG GATCATGGAGGATGGAGAAGCACCAGATAAACCTCTTGACAATGCTGTGCTCAATAGGCTCAAACAGTTCAGAGCAATGA ACCAATTCAAGAAAGTTGCACTAAGGGTCATTGCTGGCTGTTTATCAGAAGAAGAAATCATGGGGTTGAAGGAAATGTTT AGAGGGATGGACACTGACAACAGTGGAACCATTACAATTGAAGAGCTAAAGCAGGGGCTTGCAAAACAGGGGACCAAGCT AACAGAGCAAGAAGTTAAGCAGTTAATGGAAGCTGCTGATGCTGATGGCAATGGAACCATAGATTACGACGAGTTCATCA CAGCAACAATGCACATGAACAGAATGAACAGAGAAGAACATCTTTACACTGCCTTCCAATACTTTGATAAAGATAACAGC GGGTTCATTACTACTGAAGAACTAGATCAAGCTCTCCATGAATATAACATGCATGATGGTAGGGACATCAAGGAAATCCT TCATGAAGTTGATGGAGATAATGATGGTCGCATTAACTATGATGAGTTTGCGGCGATGATGAGAAAAGGAAATCCAGAAG CTCTTACTAAGAAGAGGCGTGATTCGTTTGTTTCACATTAG
Protein sequence (LotjaGi6g1v0178500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNCCSQANAGDAPEAMPAGADKGETNQKSSNNHAGGDNPATTTDPTTPPPTTSKPSPSPLPTPPSSKPTKAAPVGPVLG RPMEDVRATYSMGKELGRGQFGVTHLCTHKTTGHQFACKTIAKRKLVNKEDIEDVRREVQIMHHLTGQPNIVELKGAYED KQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTFHSMGVIHRDLKPENFLLLNKDEKSPLKATDFGLSV FYKQGDTFKDIVGSAYYIAPEVLKRRYGPEVDIWSVGVMLYILLSGVPPFWAESEHGIFNAILKGHVDFTSDPWPSISPA AKDLVRKMLNSDPKQRLTAQEVLNHPWIMEDGEAPDKPLDNAVLNRLKQFRAMNQFKKVALRVIAGCLSEEEIMGLKEMF RGMDTDNSGTITIEELKQGLAKQGTKLTEQEVKQLMEAADADGNGTIDYDEFITATMHMNRMNREEHLYTAFQYFDKDNS GFITTEELDQALHEYNMHDGRDIKEILHEVDGDNDGRINYDEFAAMMRKGNPEALTKKRRDSFVSH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 81 | 81 | - | – | |
| PANTHER | 22 | 536 | 515 | 0.0 | – | |
| PANTHER | 22 | 536 | 515 | 0.0 | – | |
| MobiDBLite | 24 | 43 | 20 | - | – | |
| MobiDBLite | 44 | 71 | 28 | - | – | |
| SUPERFAMILY | 75 | 376 | 302 | 1.35E-85 | ||
| CDD | 90 | 347 | 258 | 4.85448E-138 | – | |
| Gene3D | 90 | 173 | 84 | 3.3E-166 | – | |
| ProSiteProfiles | 90 | 348 | 259 | 48.499 | ||
| Pfam | 90 | 348 | 259 | 4.1E-75 | ||
| SMART | 90 | 348 | 259 | 2.0E-97 | ||
| ProSitePatterns | 96 | 123 | 28 | - | ||
| Gene3D | 174 | 352 | 179 | 3.3E-166 | – | |
| ProSitePatterns | 210 | 222 | 13 | - | ||
| Gene3D | 353 | 526 | 174 | 3.3E-166 | – | |
| SUPERFAMILY | 388 | 528 | 141 | 4.98E-46 | ||
| ProSiteProfiles | 391 | 426 | 36 | 14.29 | ||
| SMART | 395 | 423 | 29 | 2.8E-5 | ||
| Pfam | 396 | 456 | 61 | 7.4E-13 | ||
| ProSitePatterns | 404 | 416 | 13 | - | ||
| ProSiteProfiles | 427 | 462 | 36 | 12.979 | ||
| SMART | 431 | 459 | 29 | 1.9E-5 | ||
| ProSitePatterns | 440 | 452 | 13 | - | ||
| ProSiteProfiles | 463 | 498 | 36 | 14.067 | ||
| Pfam | 465 | 528 | 64 | 3.4E-12 | ||
| SMART | 467 | 495 | 29 | 0.081 | ||
| ProSitePatterns | 476 | 488 | 13 | - | ||
| ProSiteProfiles | 502 | 533 | 32 | 11.919 | ||
| SMART | 502 | 530 | 29 | 2.3E-5 | ||
| ProSitePatterns | 511 | 523 | 13 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | Calcium ion binding | Interacting selectively and non-covalently with calcium ions (Ca2+). | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi6g1v0178500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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