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LotjaGi6g1v0348500.3

Overview

Field Value
Gene ID LotjaGi6g1v0348500
Transcript ID LotjaGi6g1v0348500.3
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description Aldehyde dehydrogenase; TAIR: AT2G14170.1 aldehyde dehydrogenase 6B2; Swiss-Prot: sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; TrEMBL-Plants: tr|I3T9T5|I3T9T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0348500
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:66128484..66134192) extracted from Lotus japonicus Gifu genome v1.2.

ATGTTGAAGTTCCAAGAGCTTATACGCAGAGATATTGTAAGCACCTTACAATGTTTAATGTCCCTTAGATATACATCAAC TTAGACAAGGCATCCATATCAGCATATATTCTAGTAATTTTTTATTTTGATGTGATTATTACTTTGTAATTTTTTCAGGA TAAACTTGCCCTGAATATTACCACTGAACAAGGGAAGACTTTAAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGGTT GGTCTTTATGTTGCCTGAAAAGAAAGTTTAGTAATATAATGATTTGAGCTCAATTTTTGATGATGGAGTTCTCTGAACAT TTTAACTTATGTCATTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAGATGGGGGAGTATGTTTCCAATGT ATCACGTGGAATTGATACTTTCAGCATTAGAGAACCACTAGGTGTTTGTGCTGGTATTTGCCCATTCAACTTTCCTGCAA TGATTCCCTTGTGGGTAAGCTGTCTTATACTTTGTGGGTGGATTTTTGGCTATGTGACTAACTTTTGCTTTTTAGTCATT GGGTTCTTTGCTTGGTCATCTCATCCATATATCAGCATGCATAAGATAGGAAAGGTCCAATTATGTAAAATGGTCCAGAA ATATTAGGTTAGAATAGCTTGGTATTTTTCTCTTCCCATATATTATTGTCATTTCTCAAGGGAATATAACTTACATTGTA TAGGGCACAAAAATGACATCCTTTAATAAATTCTTAATGTTTATGATCTATCTGTAGATGTTCCCGATAGCAGTAACATG TGGCAATACCTTTATTCTAAAACCATCAGAGAAAGATCCAGGTGATGTTGTCTACTTATTTTGGTTGTTTATCAATACCC TTGAATTTACTTCTCAATTTTCTGTTGAATAAAATGGAAAATATTCTCTGTCATTCAAAGCAAGCTTGTGCTTCTTTAAC GTGTTATTGGCATTCTGGCATTTCGAACATATCACCATAAAATTTACTGTGAACACCAGGAGTAAGAGTTTTTTTACAAT AAATAAAACACTTCTTACTTTTTCATAAGCAACTACTCAGGATTTTGCGGTCACTATGTATATATCATCTATATTACTAA TCTGAATATTAATAAATTGCAGATTCTTTCGAAAGCAAAATTCCTGAAAACGATATAATGTGCTTTACGCTGAAATTGTA AAGTTTTCCTTTCTTATTACATTTAAATATCATATGATTTTCTTGACTGCGATTTTGAGGATGGAAATTTGCAAAGAATA TTTTTAGGAGCAATATAATGAGATGTTTTTAGTTAAAATAATGCTTCGCTATCCTTCAACTGGTTTGAAAGCTGTCCACA CTTGCACTTTCTGCTATGTAAATTTATTTAAACTAAGGATGAGTTACTTTCCAGATTAGGTTTGCATTTTGTTAATGATA CTCTGGCAACAAAAGGAAGCAAGTCAAGACCCAAGTAACATTGATGTCTTTTGACGGTGCCCATGTAAATTTGATATCTA GATAGATATCATTATTAGGAAGAATTTTTTTAGATCTTACCGTTTACATAAGAAGTATATATTAATGTAATTAGTGTTGA CTGATTAATGTGATCTTATTTATCCATCTAGTAATGAAATACTGAACATTGTAAGCCGCCAGTTTGTTTTTCTTCCCTAC CCCTATGATGGCATGCATGCTCCTTTGCTAATGAAACACTTTTCTGGCAGAACTCAGTCACTCAAAAACATACAGTCTTC TTTGTCCGCTTTCATGATTCCTCAATTTTGGTTACCTACAACTTATCGGATGTTGTGTTTTGACTTTAGTATTTTTGCAG GTGCTTCTATAATTCTTGCAGAATTGGCCATCGAGGCTGGTTTGCCTGAGGGTGTCCTAAATATAGTTCATGGAACTCAT GTATGTTATCACTTTTTTTTAAATTAAACTTTTGTTCTCCACTTGTTTCTTGTGATACTTTCAAAGTAAAGGAACTCAAG GGTTCATTTTGCATTTTCTATTTTCAAAACCTATCCAAGTTTTAAATAAGAACTTTGCACATGACAACGGGTTATATTGT CATACTCAATGCCGCTTGCTTTTTTTTTTGTTCTTTTTATTGATGTTCTTAATTATCCAATTGGTGACAGGATGTTGTTA ATGCTATTTGTGATCATGAAGACATCAAAGCCATATCTTTTGTTGGTTCAAATATTGTAAGTCATCCAACATTTTATTTT TCAGTGTACTGATTCTATGTGATGCCTTGTGACACTAGATGATGGACTAAAATATTTCAACCAGAATCCAATTATATCAG CAAAATCAAATCATTTTACAATTTGATTGTATTTATATAGAGAGATGGATGATTGCAAGTGATTAAAATGCTCTTTCTTT CAAATGGTAGTCCCACCTTACATATCCTTATTTGATGTTCTTATTTTGTATTTAAGGCTGGAATGCACATATATGCAAGA GCAGCAGCTAAAGGGAAACGTGTTCAGGTCGGTGTACTTAGTTTTCTCCTGCCCTTGGTAAAATTGATTCTTTCTACCCA TGCTAATGATCAGAAATTGCTCATCTTATCATTTTTCTTTTTATTTCAGTCTAATATGGGGGCCAAAAATCATGCGGTTG TCATGCCTGATGCGGATGTCGATGCTACCATAAATGCTTTAATTGCTGCGGGTTTTGGTGCTGCTGGACAAAGGTGCATG GCTCTCAGCACAGTTGTTTTTGTTGGAGACTCAAAACCATGGTATGATGCTCCATTATTTTGATATTGAATTTGTGTTCA TTATATTTTTGATTTAGCCTCTTACGGTTGAAACAATTTATGCTCTTCTTCTAGATGCTTTTTCCAAAATGATCTGGATG TTTGTGCCAAACTGAATCATCATTTCAACATCTCTAGAGAACATTTTGTGAATATCGTAATTGTCGTGCCAAGTAGAAGG ATGATTAAGAATTTCCATGATTTAATAATTCTGGTGGGATTGTCCAGAAAAGACTGTTCCAAGTATTTGGACTTGTAATG CAATTATCAGAAAATGACTAAGTTCATTTTGTCCGTATAAAACTTTTTTCCACTTGCTGATAATCTTTTGAGTATAATTT CATCCTTAATTCTTCATATTTTTTTGTCCAGGGAAAATATACTTGTGGAGCGTGCCAAAGCCCTTAAAGTGAATGCTGGA AATGAGCCTGATGCAGACTTGGGTCCAGTCATTAGCAAACAGGTATGTTTATGGTTCTTTTTCCATGCTATGGACTGGAA CTAAAATCTATTAGCAATCTTCATAGTATTGTTTGTCATAGCTATTCAGTATATCACATTTCCACATAAATCTTGTTATA AGTTAGCTATATATGTTTCTTAAATATTCTTTTTGACTGCACAGGCAAAGGAGCGAATACACAGATTAATTCAATCTGGG TTTGAAAAGGGTGCCAGACTAGTGCTTGATGGAAGAAATATAGTGGTAGCTGCTATGTTCTCAACCACTTTTATCATTTC ATATTTCATAATCCATACACATTTCTTGCATTTATGATCAATTTCCATTTTACCATAGAAGTTGACATAGGATTGTTTGG AAAGTGGAAACTCTCAGAAATATTTATGTACAGAAAGATTGTAAGCTGTAACTGAAGAAACATTCTTCAATTGTAATTGA ACATATCTAGTGATAACATTTCTGATAAAAATCAATGAGAACAGTTAATCTTGACCATACAACCATATATGGATGTTCAA GATTATTTTCCTTAAATATAATCTTGACTATCCATGTATTTAAAGAAACCAGTCTTCACCATCTGAGTATGGTTATATGA AGATTAAATACACACAGACATACTATATATGGTGTGCTTGTTAACCAATTAAGTATCCGTAAAAGAAATGGAACCTTTTC TTGCATAACTACTTCCGAAACCTTGAAAAAATTCTGTGGTTGTGGCGCTTGTTCAGTTGCTTGGTGGTTATATGAAGCCA TAGTGTTTTAGCACACTGAAAATTGCTTTGACTTGACTTTTAACCCTTGAAGTTACTTGTTCATTCTTGCTCCTTGGTTC TCCCTTTCCTCGATTCCCATTAGTCTGAGATGCAACAAAATGAAGTACTCCAAAAGGAAAAGTAAAATGACACAGGCAAA GGATGTACAGTTTGGTGCATATTTGTATTCCACATGCTTAGGGTCTTTATTTTTCCTTATAGTCAATGGCTTCTTTTAGA ACTGCTTAAGAATTCTTACATGCATGTCAATTAGGTACCTGGATATGAATCTGGCAATTTCATTGGCCCAACCATCTTAG CAGATGTCACTGCCGACATGGAGTGCTACAAGGTATTTTCTCATTTATCTCCAATCTCTCAAGTGTTCATTAACGAATTC CAGAAAATAGAAGGACTTGAAGTTTAGACTGAAATTTGACTATCTTTGTACCGGGATGTGCAGGAGGAGATTTTTGGTCC AGTTCTTCTACTCATGGAGGTGCATTTTGTTTGTCTCATCCTTAGAATTCTCTAATTTGGAATAGTTTGTTTTTATTTGT CTCTTTTTGGTCTTTTATATAGGAGACTCATGTATCTTTGAATTTTCATTTTGGCCCCATATGATGTATTAATGTTATGG TGACTGCTGATAGTGTTTTTCTTTTGACTTCAGTCAGATAGTTTGGAGAAGGCCATAAACATTGTCAATGAAAACAAGTA TTAGTTAACAACTGCTTCATGTTCATTTTCATTTTCATTTTGTTAAACTACCATTTATCTCTTACCCTGACTTTTCCAAC AGGTATGGAAATGGTGCTAGTATATTTACTGCTTCAGGTGTGTCTGCAAGGAAATTTCAGACAGAGATTGAGGCTGGGCA GGTTGGTGACCGAAGTTGGATGTTTGGTTTCATGTTGCTCTTCCACAGAAGCATTTCTAATCTTCTCTAACATGGTTTTT CATCATCAAAACATATTTGGGTGAAATTCTTAGAAGCACTTCAGGCTGATAAAATCATGTTGAGGCCAAAGCAAAAGGAC ATTTTTGAGTTAACATGAAAGTGATTTTAGCTCTTCTCACAAGACATTTTTAATGTTTTCCTATAAAAATTACTTATAGT AAACATATCCAAACATAAATCACATCACTATCAACTTATTTTACAATAATCAATTATGTCAGAATCAATTATATCCAAAA GATATTCTGCCAGTGCACCATTTGCTCTTGGAAGCACGTTAATAGATAGTAGTTTTATAGATTTGAACCAGTATATGCAT TGGTGTCTGTTACTAGTCAACTTAATACCTTGCATTTTTCCCTTGGCTATATTCTCTCTGCCACAAAAATAGAATGTTTA TTTGATATTGTAATGGATCATCACTTGTCACTTCATTTGAATTAGGTGGGCATCAATGTTCCCATTCCTGTTCCTTTGCC CTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCTGGCGATCTCAATTTCTATGGTATCTCAAGTCTAACTCAACTCT TCCTATACTATTAGGTTTTGCATATGATACAGCCTATGCATTAGATTTGAACTTGATGTTATTTCTTGCATGACAGGCAA GGCAGGGGTTAACTTTTTTACACAGATTAAAACAATAACTCAGCAGTGGAAGGAATCAGCTAGTGAGAACAAGATTAACA TGGCAATGCCAACCTCTCAAAAATCTTAG
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0348500.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTGAAGTTCCAAGAGCTTATACGCAGAGATATTGATAAACTTGCCCTGAATATTACCACTGAACAAGGGAAGACTTT AAAGGATGCACAAGGAGATGTATTCCGTGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGGCAACTCTACAGATGGGGG AGTATGTTTCCAATGTATCACGTGGAATTGATACTTTCAGCATTAGAGAACCACTAGGTGTTTGTGCTGGTATTTGCCCA TTCAACTTTCCTGCAATGATTCCCTTGTGGATGTTCCCGATAGCAGTAACATGTGGCAATACCTTTATTCTAAAACCATC AGAGAAAGATCCAGGTGCTTCTATAATTCTTGCAGAATTGGCCATCGAGGCTGGTTTGCCTGAGGGTGTCCTAAATATAG TTCATGGAACTCATGATGTTGTTAATGCTATTTGTGATCATGAAGACATCAAAGCCATATCTTTTGTTGGTTCAAATATT GCTGGAATGCACATATATGCAAGAGCAGCAGCTAAAGGGAAACGTGTTCAGTCTAATATGGGGGCCAAAAATCATGCGGT TGTCATGCCTGATGCGGATGTCGATGCTACCATAAATGCTTTAATTGCTGCGGGTTTTGGTGCTGCTGGACAAAGGTGCA TGGCTCTCAGCACAGTTGTTTTTGTTGGAGACTCAAAACCATGGGAAAATATACTTGTGGAGCGTGCCAAAGCCCTTAAA GTGAATGCTGGAAATGAGCCTGATGCAGACTTGGGTCCAGTCATTAGCAAACAGGCAAAGGAGCGAATACACAGATTAAT TCAATCTGGGTTTGAAAAGGGTGCCAGACTAGTGCTTGATGGAAGAAATATAGTGGTACCTGGATATGAATCTGGCAATT TCATTGGCCCAACCATCTTAGCAGATGTCACTGCCGACATGGAGTGCTACAAGGAGGAGATTTTTGGTCCAGTTCTTCTA CTCATGGAGTCAGATAGTTTGGAGAAGGCCATAAACATTGTCAATGAAAACAAGTATGGAAATGGTGCTAGTATATTTAC TGCTTCAGGTGTGTCTGCAAGGAAATTTCAGACAGAGATTGAGGCTGGGCAGGTGGGCATCAATGTTCCCATTCCTGTTC CTTTGCCCTTTTTCTCATTTACTGGCAACAAGGCATCATTTGCTGGCGATCTCAATTTCTATGGCAAGGCAGGGGTTAAC TTTTTTACACAGATTAAAACAATAACTCAGCAGTGGAAGGAATCAGCTAGTGAGAACAAGATTAACATGGCAATGCCAAC CTCTCAAAAATCTTAG
Download CDS Sequence

Protein sequence (LotjaGi6g1v0348500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLKFQELIRRDIDKLALNITTEQGKTLKDAQGDVFRGLEVVEHACGMATLQMGEYVSNVSRGIDTFSIREPLGVCAGICP FNFPAMIPLWMFPIAVTCGNTFILKPSEKDPGASIILAELAIEAGLPEGVLNIVHGTHDVVNAICDHEDIKAISFVGSNI AGMHIYARAAAKGKRVQSNMGAKNHAVVMPDADVDATINALIAAGFGAAGQRCMALSTVVFVGDSKPWENILVERAKALK VNAGNEPDADLGPVISKQAKERIHRLIQSGFEKGARLVLDGRNIVVPGYESGNFIGPTILADVTADMECYKEEIFGPVLL LMESDSLEKAINIVNENKYGNGASIFTASGVSARKFQTEIEAGQVGINVPIPVPLPFFSFTGNKASFAGDLNFYGKAGVN FFTQIKTITQQWKESASENKINMAMPTSQKS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43866:SF9
1 431 431 1.5E-287 –
PANTHER
PTHR43866
1 431 431 1.5E-287
IPR010061
CDD
cd07085
1 412 412 0.0
IPR010061
TIGRFAM
TIGR01722
1 412 412 1.8E-199
IPR010061
Pfam
PF00171
1 408 408 5.3E-122
IPR015590
Gene3D
G3DSA:3.40.605.10
1 407 407 6.7E-127
IPR016162
SUPERFAMILY
SSF53720
2 413 412 2.09E-120
IPR016161
Gene3D
G3DSA:3.40.309.10
182 379 198 6.7E-127
IPR016163
ProSitePatterns
PS00070
206 217 12 -
IPR016160

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004491
Molecular function Methylmalonate-semialdehyde dehydrogenase (acylating) activity Catalysis of the reaction: 2-methyl-3-oxopropanoate + CoA + NAD+ = propanoyl-CoA + CO2 + NADH + H+.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of
GO:0016620
Molecular function Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
Subterm of
GO:0055114
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0348500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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