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Field | Value |
---|---|
Gene ID | LotjaGi6g1v0349400 |
Transcript ID | LotjaGi6g1v0349400.2 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Magnesium-dependent phosphatase 1; TAIR: AT2G14110.1 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein; Swiss-Prot: sp|Q9D967|MGDP1_MOUSE Magnesium-dependent phosphatase 1; TrEMBL-Plants: tr|I3S090|I3S090_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0349400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:66194085..66195463) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGAGCATGCGACGGAGAAGGTGAAGGCGGAGGCAGTGCAGAAAATCGAATCGTTTGAAGTTCTGCCAAAGCTTGT CGTCTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGGTTCGTTCCTTCTCTAACCTAATTTGAATTCTTCTTCTACA CATAGAAATCTGAACATGTTGAGTTTGATTCATTTCAGTGAGTGTCGATCGAAGCGTGAAACGCCTTCTCTGTATCCCCA CGCAAAGGGCATATTAATGGCGCTGAAGCAGAAAGGAATCGATGTTGCCATTGCTTCTCGATCACCAACCTCTGATATTG CTAATGCTTTTCTCAACAAATTGAACCTCAATTCAATGTTTGTTGCCAAGGTGCGTGTGTTGTTTTTGTTGCATTATTCA GATTTATGTATTGAATTTATGACATGTAGTTCATGTGTTGTTGTTCAGGAAATATTTTCAAGCTGGACGCATAAAACTGA TCATTTTCACAGAATTCATTCAACCACTGGGGTTCCTTTCAGCTCTATGCTCTTCTTTGATGATGAGAATAGGAACATCC AAGCGGTAACAATACACAACACTCACTTTTTAGCTGTATATTTAATTTGGCGCCAGAGCAACGCTGATTTCACGTATCTC GATGTATCAATAGAGAAGTTAGAATTTGACACGTTAACTCAACATGGTTGGAAAAGCATGGTTTCATCCCATCGAGTTCA ATGTGGATCCACGTTGAGTCAACAGAAATCCAAACACTTTCATCACTTCAAGTTCAATCTAGATCCACGTTGAATTAACA GAAAATCCAAACACACACACTGTGTGTGTATTTGGTTGCAAACGCAAAGATTTTGTCATGTGACCTTCAATGTAAATCCA TAAACACAAACTGATTGTACTATTCTATTCTCTCATTATTTGTCTGTTATTATCATTTTCATTTATAGGTCTCTAAAATG GGAGTGACAAGCATTTTGGTTGGAAATGGTGTAAATCTTGGATCACTAACTGAAGGCCTTGCACAATTTGCTAGAAACTG GAATGCATCGCAGAAGAACAAGCAGAAATGGCTCACTGACTACTCTAACAAGCCAAATACCTCAAACCATGCTCCCTGAA ATTTAATATCCAATTGGAATATATGTGTGTGGATTTTATTCAGAATCTCATTGATGAATTTAAATGTTGTAATTCAAGAA TATTCCTAATGGAAGTCATTGCTGAGTGATAGTCTGAAAATACTGTATCAATACATAAGAAGAGCTTGTAAGGCAGCCTC CATCATGAACTCATGATCCATAAACATGTATCTGTGTCTTATAAGCTGTTATACTTTGCATTAATGTTACCAGAAATTTT GAATGGTAAAATTTGTTGA
CDS sequence (LotjaGi6g1v0349400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGAGCATGCGACGGAGAAGGTGAAGGCGGAGGCAGTGCAGAAAATCGAATCGTTTGAAGTTCTGCCAAAGCTTGT CGTCTTCGATCTCGATTACACTCTCTGGCCTTTCTACTGTGAGTGTCGATCGAAGCGTGAAACGCCTTCTCTGTATCCCC ACGCAAAGGGCATATTAATGGCGCTGAAGCAGAAAGGAATCGATGTTGCCATTGCTTCTCGATCACCAACCTCTGATATT GCTAATGCTTTTCTCAACAAATTGAACCTCAATTCAATGTTTGTTGCCAAGGAAATATTTTCAAGCTGGACGCATAAAAC TGATCATTTTCACAGAATTCATTCAACCACTGGGGTTCCTTTCAGCTCTATGCTCTTCTTTGATGATGAGAATAGGAACA TCCAAGCGGTCTCTAAAATGGGAGTGACAAGCATTTTGGTTGGAAATGGTGTAAATCTTGGATCACTAACTGAAGGCCTT GCACAATTTGCTAGAAACTGGAATGCATCGCAGAAGAACAAGCAGAAATGGCTCACTGACTACTCTAACAAGCCAAATAC CTCAAACCATAAATTTTGA
Protein sequence (LotjaGi6g1v0349400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAEHATEKVKAEAVQKIESFEVLPKLVVFDLDYTLWPFYCECRSKRETPSLYPHAKGILMALKQKGIDVAIASRSPTSDI ANAFLNKLNLNSMFVAKEIFSSWTHKTDHFHRIHSTTGVPFSSMLFFDDENRNIQAVSKMGVTSILVGNGVNLGSLTEGL AQFARNWNASQKNKQKWLTDYSNKPNTSNHKF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Gene3D | 3 | 170 | 168 | 9.6E-50 | ||
SFLD | 6 | 172 | 167 | 0.0 | – | |
PANTHER | 6 | 176 | 171 | 1.4E-83 | – | |
SFLD | 6 | 172 | 167 | 0.0 | – | |
PANTHER | 6 | 176 | 171 | 1.4E-83 | ||
Pfam | 23 | 43 | 21 | 1.0E-6 | ||
CDD | 24 | 147 | 124 | 6.70732E-57 | ||
SUPERFAMILY | 24 | 155 | 132 | 1.12E-22 | ||
TIGRFAM | 25 | 140 | 116 | 9.0E-13 | ||
Pfam | 49 | 165 | 117 | 5.3E-28 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Phosphatase activity | Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate. |
Expression pattern of LotjaGi6g1v0349400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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