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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0364700 |
| Transcript ID | LotjaGi6g1v0364700.1 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone DnaK; TAIR: AT5G49910.1 chloroplast heat shock protein 70-2; Swiss-Prot: sp|Q02028|HSP7S_PEA Stromal 70 kDa heat shock-related protein, chloroplastic; TrEMBL-Plants: tr|I1MJU7|I1MJU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0364700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:67672976..67675475) extracted from Lotus japonicus Gifu genome v1.2.
ATGTCCGAGGTCGACGAAGAGTCCAAGCAGGTCTCTTACAGGGTCATCAGGGACGAGAATGGCAACGTCAAGCTCGATTG CCCCGCTATTGGCAAGAGTTTCGCTGCCGAAGAAATCTCTGCTCAGGTTCATTTTCAGCTTTCTGTTTTGCACTGCACTA ATTAGCTAGCTATTTCATTTTTCATTTCATTGTCCATTTGTCATATATTATATTATATTATATTATATTATAGGTCTTGA GGAAGCTTGTAGATGATGCTTCCAAGTTTTTGAATGATAAAGTCACCAAGGCAGTAGTTACTGTCCCTGCTTACTTCAAT GATTCCCAAAGAACTGCTACCAAGGATGCTGGCAAGATTGCTGGTTTAGAAGTTCTTCGTATTATCAATGAACCCACTGC TGCATCCTTGGCTTATGGCTTTGAAAGGAAAAACAATGAAACTATCTTGGTATTTGACCTTGGAGGTGGTACTTTTGATG TCTCAGGTAACTTTTCCAACCACATCATCATGCTTCAATTCTCTTTTTATTTCTATTAAGCCTGATTTCTATCCAACTCC ATTCTAGTGCTTGAGGTTGGTGATGGAGTGTTTGAAGTCTTGTCTACTTCTGGTGATACACACTTAGGTGGTGATGACTT TGATAAGGTTAGACTTGTTTTACCATCCTAAACTACAAATCTTATACTTTGGTTTATCTTATGATTAACATTTCTCATAT CTTATCTGTTGGCTGTAGAGAATTGTCGATTGGCTGGCTGCAGACTTCAAGAGAAATGAAGGTATAGACCTTTTGAAAGA CAAACAAGCTCTTCAGCGTCTCACTGAAACTGCTGAGAAAGCTAAAATGGAGCTCTCATCATTGACTCAAACTAACATCA GGTATTTACCATACCATTGACCAATCTTCACCCATTCCAAAAGTTTGAGCCCCTCTTTAGCTTAATGCAAACTACTGAAA TACTGCTGTCTGCGTTTTCAGTTTGCCGTTCATAACTGCAACAGCAGATGGCCCCAAGCATATTGAGACCACCCTTACAA GGGCTAAGTTTGAGGAATTATGTTCAGATCTCCTTGACAGGTAATGATATTGAATCTATTTTTCCTAAGTGCTCTTACTT TTAATGTGACTAATTGGTTTTCAAGCTGATATAATTTTGCTGCTAGCTTGAATCTCTTTTACTAATGCTAAAAAAATGCC CTGGTTTAGTAATATTTGTATGAATTGTGTTACAGGCTTAGGACGCCAGTGGAAAATTCGTTAAGGGATGCAAAACTCTC ATTTAAGGATCTTGATGAGGTGATTCTTGTGGGTGGATCAACACGTATCCCTGCAGTCCAGGAACTGGTGAAGAAGATGA CTGGGAAGGACCCTAATGTCACTGTCAATCCAGATGAAGTGGTTGCCCTTGGAGCTGCAGTTCAGGTGGGGTTACCTGTG TTCATTGAGGGCTGATTAATTTTTGCAGGGTTTTTAAGGGGAGGGGAATGGGTGAGAGAACTTGTTTGAGCATTAAAGCT TTTGGTGGAGATATTGTTTTCTAGGTAGCATAATGTCTGTTGATGAAAATCTTGTGATCTTTGAATTGTTTTTAGGCTGG TGTCTTGGCTGGGGATGTCAGTGACATTGTGCTGTTGGATGTTACTCCCTTATCCATTGGTCTGGAAACTCTAGGTGGCG TAATGACGAAAATCATCCCGCGGAACACTACTCTTCCCACTTCCAAATCAGAGGTTTTCTCCACTGCTGCTGATGGTCAG ACCAGTGTAGAGATCAATGTCCTCCAGGGTGAGAGAGAATTTGTTAGGGATAACAAATCTCTTGGTAGCTTCCGCTTGGA CGGTATCCCTCCGGCCCAACGTGGTGTTCCCCAGATTGAGGTGAAGTTTGACATTGATGCCAATGGTATTCTCTCTGTCA CGGCTGTGGACAAGGGCACAGGGAAAAAGCAAGATATTACCATTACTGGAGCTAGCACCTTGCCTAATGATGAGGTATCT CCTATAACTGTCATTCACTTGTGTAAACTGTTAGTAGTATTTCTTTGTTTGAATTGCCTAATAATGATGTTATCTTGTAC GAAATGCAGGTGGACAGGATGGTGAAGGAGGCTGAGAGATTTGCAAAGGAGGACAAAGAAAGGAGGGATGCAATCGACAC AAAGAACCAAGCAGACTCTGTTGTGTACCAGACTGAGAAACAGTTGAAGGAACTTGGAGACAAGGTTCCTGGCCCTGTGA AAGAGAAGGTTGAAGCCAAACTGGGAGAGCTTAAAGATGCAATTTCCGGTGGTTCAACCCAAGATATTAAAGATGCCATG GCTGCCCTGAATCAGGAAGTTATGCAGATTGGTCAGTCCCTCTACAACCAGCCAGGAGCAGCTACAGGTCCAGGAGGGCC TACACCACCTGGCCCTGAGTCTGGCTCCTCAGAATCACCATCATCAGGCAAGGGACCCGATGGGGATGTGATCGATGCAG ATTTTACCGACTCTAAATGA
CDS sequence (LotjaGi6g1v0364700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCGAGGTCGACGAAGAGTCCAAGCAGGTCTCTTACAGGGTCATCAGGGACGAGAATGGCAACGTCAAGCTCGATTG CCCCGCTATTGGCAAGAGTTTCGCTGCCGAAGAAATCTCTGCTCAGGTCTTGAGGAAGCTTGTAGATGATGCTTCCAAGT TTTTGAATGATAAAGTCACCAAGGCAGTAGTTACTGTCCCTGCTTACTTCAATGATTCCCAAAGAACTGCTACCAAGGAT GCTGGCAAGATTGCTGGTTTAGAAGTTCTTCGTATTATCAATGAACCCACTGCTGCATCCTTGGCTTATGGCTTTGAAAG GAAAAACAATGAAACTATCTTGGTATTTGACCTTGGAGGTGGTACTTTTGATGTCTCAGTGCTTGAGGTTGGTGATGGAG TGTTTGAAGTCTTGTCTACTTCTGGTGATACACACTTAGGTGGTGATGACTTTGATAAGAGAATTGTCGATTGGCTGGCT GCAGACTTCAAGAGAAATGAAGGTATAGACCTTTTGAAAGACAAACAAGCTCTTCAGCGTCTCACTGAAACTGCTGAGAA AGCTAAAATGGAGCTCTCATCATTGACTCAAACTAACATCAGTTTGCCGTTCATAACTGCAACAGCAGATGGCCCCAAGC ATATTGAGACCACCCTTACAAGGGCTAAGTTTGAGGAATTATGTTCAGATCTCCTTGACAGGCTTAGGACGCCAGTGGAA AATTCGTTAAGGGATGCAAAACTCTCATTTAAGGATCTTGATGAGGTGATTCTTGTGGGTGGATCAACACGTATCCCTGC AGTCCAGGAACTGGTGAAGAAGATGACTGGGAAGGACCCTAATGTCACTGTCAATCCAGATGAAGTGGTTGCCCTTGGAG CTGCAGTTCAGGTGGGGTTACCTGCTGGTGTCTTGGCTGGGGATGTCAGTGACATTGTGCTGTTGGATGTTACTCCCTTA TCCATTGGTCTGGAAACTCTAGGTGGCGTAATGACGAAAATCATCCCGCGGAACACTACTCTTCCCACTTCCAAATCAGA GGTTTTCTCCACTGCTGCTGATGGTCAGACCAGTGTAGAGATCAATGTCCTCCAGGGTGAGAGAGAATTTGTTAGGGATA ACAAATCTCTTGGTAGCTTCCGCTTGGACGGTATCCCTCCGGCCCAACGTGGTGTTCCCCAGATTGAGGTGAAGTTTGAC ATTGATGCCAATGGTATTCTCTCTGTCACGGCTGTGGACAAGGGCACAGGGAAAAAGCAAGATATTACCATTACTGGAGC TAGCACCTTGCCTAATGATGAGGTGGACAGGATGGTGAAGGAGGCTGAGAGATTTGCAAAGGAGGACAAAGAAAGGAGGG ATGCAATCGACACAAAGAACCAAGCAGACTCTGTTGTGTACCAGACTGAGAAACAGTTGAAGGAACTTGGAGACAAGGTT CCTGGCCCTGTGAAAGAGAAGGTTGAAGCCAAACTGGGAGAGCTTAAAGATGCAATTTCCGGTGGTTCAACCCAAGATAT TAAAGATGCCATGGCTGCCCTGAATCAGGAAGTTATGCAGATTGGTCAGTCCCTCTACAACCAGCCAGGAGCAGCTACAG GTCCAGGAGGGCCTACACCACCTGGCCCTGAGTCTGGCTCCTCAGAATCACCATCATCAGGCAAGGGACCCGATGGGGAT GTGATCGATGCAGATTTTACCGACTCTAAATGA
Protein sequence (LotjaGi6g1v0364700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSEVDEESKQVSYRVIRDENGNVKLDCPAIGKSFAAEEISAQVLRKLVDDASKFLNDKVTKAVVTVPAYFNDSQRTATKD AGKIAGLEVLRIINEPTAASLAYGFERKNNETILVFDLGGGTFDVSVLEVGDGVFEVLSTSGDTHLGGDDFDKRIVDWLA ADFKRNEGIDLLKDKQALQRLTETAEKAKMELSSLTQTNISLPFITATADGPKHIETTLTRAKFEELCSDLLDRLRTPVE NSLRDAKLSFKDLDEVILVGGSTRIPAVQELVKKMTGKDPNVTVNPDEVVALGAAVQVGLPAGVLAGDVSDIVLLDVTPL SIGLETLGGVMTKIIPRNTTLPTSKSEVFSTAADGQTSVEINVLQGEREFVRDNKSLGSFRLDGIPPAQRGVPQIEVKFD IDANGILSVTAVDKGTGKKQDITITGASTLPNDEVDRMVKEAERFAKEDKERRDAIDTKNQADSVVYQTEKQLKELGDKV PGPVKEKVEAKLGELKDAISGGSTQDIKDAMAALNQEVMQIGQSLYNQPGAATGPGGPTPPGPESGSSESPSSGKGPDGD VIDADFTDSK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 542 | 542 | 0.0 | – | |
| PANTHER | 1 | 542 | 542 | 0.0 | ||
| Gene3D | 3 | 42 | 40 | 1.3E-116 | – | |
| Pfam | 3 | 526 | 524 | 1.3E-220 | ||
| SUPERFAMILY | 8 | 107 | 100 | 7.12E-27 | ||
| Gene3D | 43 | 296 | 254 | 1.3E-116 | – | |
| PRINTS | 62 | 82 | 21 | 3.7E-57 | – | |
| Gene3D | 108 | 281 | 174 | 1.3E-116 | – | |
| SUPERFAMILY | 110 | 298 | 189 | 2.47E-67 | ||
| ProSitePatterns | 115 | 128 | 14 | - | ||
| PRINTS | 121 | 131 | 11 | 3.7E-57 | – | |
| Gene3D | 147 | 234 | 88 | 1.3E-116 | – | |
| Coils | 171 | 198 | 28 | - | – | |
| PRINTS | 253 | 269 | 17 | 3.7E-57 | – | |
| ProSitePatterns | 256 | 270 | 15 | - | ||
| PRINTS | 284 | 304 | 21 | 3.7E-57 | – | |
| Gene3D | 303 | 428 | 126 | 6.0E-57 | ||
| SUPERFAMILY | 307 | 463 | 157 | 8.63E-62 | ||
| PRINTS | 311 | 330 | 20 | 3.7E-57 | – | |
| PRINTS | 392 | 408 | 17 | 3.7E-57 | – | |
| SUPERFAMILY | 430 | 527 | 98 | 1.33E-14 | ||
| Gene3D | 430 | 529 | 100 | 7.7E-34 | ||
| MobiDBLite | 523 | 570 | 48 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0364700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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