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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000157
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 478 results. Now displaying 2 of 10 with 50 rows per page. This search has taken 5.932s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0194289.1
n.a. Resistance protein MG13 [Medicago truncatula] gi|357494453|ref|XP_003617515.1| chr0 94779012 94780362 +
6 domain predictions
2 GO terms
Lj0g3v0197999.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 96462692 96469107 -
6 domain predictions
2 GO terms
Lj0g3v0198609.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356519558|ref|XP_003528439.1| chr0 96979990 96980685 +
6 domain predictions
2 GO terms
Lj0g3v0201709.1
n.a. CCP [Medicago truncatula] gi|357494181|ref|XP_003617379.1| chr0 99797286 99800542 +
6 domain predictions
2 GO terms
Lj0g3v0203979.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 101123931 101125989 -
6 domain predictions
2 GO terms
Lj0g3v0212039.1
n.a. PREDICTED: TMV resistance protein N-like [Cicer arietinum] gi|502156470|ref|XP_004510490.1| chr0 106927287 106932003 -
6 domain predictions
2 GO terms
Lj0g3v0213739.1
n.a. Tir-nbs-lrr resistance protein [Medicago truncatula] gi|357468521|ref|XP_003604545.1| chr0 108005844 108010811 -
6 domain predictions
2 GO terms
Lj0g3v0214779.1
n.a. TIR-NBS-LRR type disease resistance protein [Medicago truncatula] gi|357452805|ref|XP_003596679.1| chr0 108871376 108877767 +
6 domain predictions
2 GO terms
Lj0g3v0221309.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542397|ref|XP_003539653.1| chr0 113535537 113541310 -
6 domain predictions
2 GO terms
Lj0g3v0221339.1
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr0 113547039 113556094 -
5 domain predictions
2 GO terms
Lj0g3v0221339.2
n.a. NBS-containing resistance-like protein [Medicago truncatula] gi|357469529|ref|XP_003605049.1| chr0 113547726 113556094 -
6 domain predictions
2 GO terms
Lj0g3v0223409.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 115180723 115187482 +
6 domain predictions
2 GO terms
Lj0g3v0238169.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356542401|ref|XP_003539655.1| chr0 123510374 123513151 +
6 domain predictions
2 GO terms
Lj0g3v0239969.1
n.a. TIR-NBS-LRR RCT1 resistance protein [Medicago truncatula] gi|357468645|ref|XP_003604607.1| chr0 124548317 124550771 +
3 domain predictions
2 GO terms
Lj0g3v0245119.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356506795|ref|XP_003522161.1| chr0 127100743 127101436 +
6 domain predictions
2 GO terms
Lj0g3v0245139.1
n.a. Disease resistance protein [Medicago truncatula] gi|357465699|ref|XP_003603134.1| chr0 127101383 127102021 +
3 domain predictions
2 GO terms
Lj0g3v0247409.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
6 domain predictions
2 GO terms
Lj0g3v0247409.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
6 domain predictions
2 GO terms
Lj0g3v0247409.3
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 128197093 128203883 -
6 domain predictions
2 GO terms
Lj0g3v0247889.1
n.a. Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494437|ref|XP_003617507.1| chr0 128503146 128503774 +
6 domain predictions
2 GO terms
Lj0g3v0248489.1
n.a. Toll interleukin receptor [Medicago truncatula] gi|357494449|ref|XP_003617513.1| chr0 128807477 128809908 +
3 domain predictions
2 GO terms
Lj0g3v0254329.2
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132048903 132052054 +
6 domain predictions
2 GO terms
Lj0g3v0254349.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132058195 132060524 +
6 domain predictions
2 GO terms
Lj0g3v0254369.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 132063443 132066704 +
6 domain predictions
2 GO terms
Lj0g3v0255889.1
n.a. NBS-LRR resistance-like protein [Medicago truncatula] gi|357521387|ref|XP_003630982.1| chr0 132878474 132884068 +
6 domain predictions
2 GO terms
Lj0g3v0268419.1
n.a. TMV resistance protein N [Medicago truncatula] gi|357504435|ref|XP_003622506.1| chr0 138940781 138945800 +
6 domain predictions
2 GO terms
Lj0g3v0273259.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 141600345 141607745 -
6 domain predictions
2 GO terms
Lj0g3v0273259.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356570335|ref|XP_003553345.1| chr0 141600345 141607745 -
6 domain predictions
2 GO terms
Lj0g3v0275419.1
n.a. NBS resistance protein-like protein [Medicago truncatula] gi|357469163|ref|XP_003604866.1| chr0 142856976 142868107 -
6 domain predictions
2 GO terms
Lj0g3v0277199.1
n.a. PREDICTED: protein PHLOEM PROTEIN 2-LIKE A6-like [Fragaria vesca subsp]. vesca] gi|470113788|ref|XP_004293102.1| chr0 143860883 143863395 +
6 domain predictions
2 GO terms
Lj0g3v0282469.1
n.a. NBS-LRR resistance-like protein 4G [Medicago truncatula] gi|357515077|ref|XP_003627827.1| chr0 146440998 146447078 +
6 domain predictions
2 GO terms
Lj0g3v0293239.1
n.a. Disease resistance-like protein [Medicago truncatula] gi|357486939|ref|XP_003613757.1| chr0 152237603 152239296 -
3 domain predictions
2 GO terms
Lj0g3v0294259.1
n.a. n.a. chr0 152891486 152893698 +
6 domain predictions
2 GO terms
Lj0g3v0294269.1
n.a. Disease resistance-like protein GS0-1 [Medicago truncatula] gi|357494433|ref|XP_003617505.1| chr0 152891486 152894936 -
6 domain predictions
2 GO terms
Lj0g3v0294279.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 152895123 152897638 -
6 domain predictions
2 GO terms
Lj0g3v0294289.1
n.a. TIR-similar-domain-containing protein TSDC [Medicago truncatula] gi|357494439|ref|XP_003617508.1| chr0 152898507 152900152 -
6 domain predictions
2 GO terms
Lj0g3v0297389.1
n.a. n.a. chr0 154572869 154582454 -
6 domain predictions
2 GO terms
Lj0g3v0297389.2
n.a. TMV resistance protein N [Medicago truncatula] gi|357509247|ref|XP_003624912.1| chr0 154572869 154582454 -
6 domain predictions
2 GO terms
Lj0g3v0297389.3
n.a. n.a. chr0 154572869 154582454 -
6 domain predictions
2 GO terms
Lj0g3v0299129.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 155492968 155496250 -
6 domain predictions
2 GO terms
Lj0g3v0302489.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 157373359 157379450 -
6 domain predictions
2 GO terms
Lj0g3v0302489.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356561802|ref|XP_003549167.1| chr0 157375434 157379450 -
6 domain predictions
2 GO terms
Lj0g3v0302529.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 157389483 157393887 -
6 domain predictions
2 GO terms
Lj0g3v0302529.2
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356573485|ref|XP_003554889.1| chr0 157389735 157393887 -
6 domain predictions
2 GO terms
Lj0g3v0307239.1
n.a. Resistance protein PRG [Medicago truncatula] gi|357499649|ref|XP_003620113.1| chr0 160386708 160389543 -
6 domain predictions
2 GO terms
Lj0g3v0307459.1
n.a. PREDICTED: TMV resistance protein N-like [Glycine max] gi|356499336|ref|XP_003518497.1| chr0 160465872 160470657 -
6 domain predictions
2 GO terms
Lj0g3v0310499.1
n.a. disease resistance protein [Phaseolus vulgaris] gi|74231152|gb|ABA00702.1| chr0 162172119 162177717 +
6 domain predictions
2 GO terms
Lj0g3v0311349.1
n.a. n.a. chr0 162557005 162559516 +
6 domain predictions
2 GO terms
Lj0g3v0312469.1
n.a. PREDICTED: probable disease resistance protein At1g52660-like [Cicer arietinum] gi|502183056|ref|XP_004517051.1| chr0 163130203 163135966 -
6 domain predictions
2 GO terms
Lj0g3v0318919.1
n.a. PREDICTED: heat shock cognate 70 kDa protein isoform 1 [Vitis vinifera] gi|225440324|ref|XP_002263599.1| chr0 166537883 166542519 +
6 domain predictions
2 GO terms