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TIR domain
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
| Transcript | Name | Description | Predicted domains | Domain count |
|---|---|---|---|---|
| – | PREDICTED: TMV resistance protein N-like [Glycine max] gi|356519558|ref|XP_003528439.1| | 7 | ||
| – | PREDICTED: protein PHLOEM PROTEIN 2-LIKE A6-like [Fragaria vesca subsp]. vesca] gi|470113788|ref|XP_004293102.1| | 8 | ||
| – | Disease resistance protein (TIR-NBS class) [Theobroma cacao] gi|508726884|gb|EOY18781.1| | 9 | ||
| – | Disease resistance protein (TIR-NBS class); TAIR: AT4G23440.1 Disease resistance protein (TIR-NBS class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K584|K7K584_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434600 | 11 | ||
| – | Disease resistance protein (TIR-NBS class); TAIR: AT4G23440.1 Disease resistance protein (TIR-NBS class); Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|K7K584|K7K584_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0434600 | 11 | ||
| – | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT1G52900.1 Toll-Interleukin-Resistance (TIR) domain family protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|I1KDZ9|I1KDZ9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0050000 | 9 | ||
| – | Disease resistance protein (TIR-NBS-LRR class); TAIR: AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|A0A151R8Q6|A0A151R8Q6_CAJCA TMV resistance protein N; Found in the gene: LotjaGi4g1v0052800 | 9 | ||
| – | Disease resistance protein (TIR-NBS-LRR class), putative; TAIR: AT1G61105.1 Toll-Interleukin-Resistance (TIR) domain family protein; Swiss-Prot: sp|Q40392|TMVRN_NICGU TMV resistance protein N; TrEMBL-Plants: tr|I1KLG4|I1KLG4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0335800 | 9 |
A list of co-occurring predicted domains within the L. japonicus gene space:
| Predicted domain | Source | Observations | Saturation (%) |
|---|---|---|---|
| SSF52200 | SUPERFAMILY | 1 | 12.50 |