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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001594
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 61 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.291s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0534300.5
n.a. S-acyltransferase; TAIR: AT4G15080.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q8L5Y5|ZDH17_ARATH Probable protein S-acyltransferase 19; TrEMBL-Plants: tr|I1LPE3|I1LPE3_SOYBN S-acyltransferase; Found in the gene: LotjaGi3g1v0534300 LjG1.1_chr3 95117668 95122220 +
2 domain predictions
1 GO term
LotjaGi3g1v0534300.6
n.a. S-acyltransferase; TAIR: AT4G15080.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q8L5Y5|ZDH17_ARATH Probable protein S-acyltransferase 19; TrEMBL-Plants: tr|I1LPE3|I1LPE3_SOYBN S-acyltransferase; Found in the gene: LotjaGi3g1v0534300 LjG1.1_chr3 95117877 95122220 +
2 domain predictions
1 GO term
LotjaGi4g1v0042800.1
n.a. S-acyltransferase; TAIR: AT2G14255.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q3EC11|ZDHC2_ARATH Probable protein S-acyltransferase 23; TrEMBL-Plants: tr|A0A151SIB0|A0A151SIB0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0042800 LjG1.1_chr4 5055318 5065245 +
2 domain predictions
1 GO term
LotjaGi4g1v0213600.1
n.a. S-acyltransferase; TAIR: AT3G60800.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q8VYP5|ZDH14_ARATH Probable protein S-acyltransferase 14; TrEMBL-Plants: tr|A0A1J7HAG5|A0A1J7HAG5_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0213600 LjG1.1_chr4 49702276 49706848 +
2 domain predictions
1 GO term
LotjaGi4g1v0280300.1
n.a. S-acyltransferase; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q52T38|ZDH22_ARATH Protein S-acyltransferase 24; TrEMBL-Plants: tr|A0A151SRG0|A0A151SRG0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0280300 LjG1.1_chr4 65126908 65134361 +
2 domain predictions
1 GO term
LotjaGi4g1v0280300.2
n.a. S-acyltransferase; TAIR: AT5G20350.1 Ankyrin repeat family protein with DHHC zinc finger domain-containing protein; Swiss-Prot: sp|Q52T38|ZDH22_ARATH Protein S-acyltransferase 24; TrEMBL-Plants: tr|A0A151SRG0|A0A151SRG0_CAJCA S-acyltransferase; Found in the gene: LotjaGi4g1v0280300 LjG1.1_chr4 65127881 65133911 +
2 domain predictions
1 GO term
LotjaGi4g1v0419700.1
n.a. S-acyltransferase; TAIR: AT3G26935.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7; TrEMBL-Plants: tr|I3SGK3|I3SGK3_LOTJA S-acyltransferase; Found in the gene: LotjaGi4g1v0419700 LjG1.1_chr4 79523377 79527774 +
2 domain predictions
1 GO term
LotjaGi5g1v0237700.1
n.a. S-acyltransferase; TAIR: AT4G01730.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q9M115|ZDH16_ARATH Protein S-acyltransferase 18; TrEMBL-Plants: tr|A0A0L9TY88|A0A0L9TY88_PHAAN S-acyltransferase; Found in the gene: LotjaGi5g1v0237700 LjG1.1_chr5 54580362 54583934 +
2 domain predictions
1 GO term
LotjaGi5g1v0271400.1
n.a. S-acyltransferase; TAIR: AT5G04270.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q500Z2|ZDH20_ARATH Probable protein S-acyltransferase 15; TrEMBL-Plants: tr|I1NHH9|I1NHH9_SOYBN S-acyltransferase; Found in the gene: LotjaGi5g1v0271400 LjG1.1_chr5 58509531 58515416 +
2 domain predictions
1 GO term
LotjaGi5g1v0271400.2
n.a. S-acyltransferase; TAIR: AT5G04270.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q500Z2|ZDH20_ARATH Probable protein S-acyltransferase 15; TrEMBL-Plants: tr|A0A0B2NUQ6|A0A0B2NUQ6_GLYSO S-acyltransferase; Found in the gene: LotjaGi5g1v0271400 LjG1.1_chr5 58509649 58513936 +
2 domain predictions
1 GO term
LotjaGi5g1v0289000.1
n.a. S-acyltransferase; TAIR: AT4G24630.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q9SB58|ZDH19_ARATH Protein S-acyltransferase 8; TrEMBL-Plants: tr|I3T0B6|I3T0B6_LOTJA S-acyltransferase; Found in the gene: LotjaGi5g1v0289000 LjG1.1_chr5 60567636 60572982 +
2 domain predictions
1 GO term