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| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0419700 |
| Transcript ID | LotjaGi4g1v0419700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT3G26935.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q0WQK2|ZDHC9_ARATH Probable protein S-acyltransferase 7; TrEMBL-Plants: tr|I3SGK3|I3SGK3_LOTJA S-acyltransferase; Found in the gene: LotjaGi4g1v0419700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:79523377..79527774) extracted from Lotus japonicus Gifu genome v1.2.
GAGAGTAATAACTTCTCTTACCAATTTTATATTTTTAAATTAATGAAAACAAAAAAAGCATTTATTTGTCATTAAACAAT TATAAAAGAGGAGAGAGAAACGCCGCCTTGTGAGTTTTGACCAGCGAAGCAATGAAATGCAAATGGGGGGTGGTTGTGGT TGTTGTTGTTGTTGTTGATTCAGTCTTAATTAATTTCCCCATTACTACTTTCATTCTCTTCTTCCTCCGGTGAATGCAAT GCCGCCGCAACCGCAACCACAACCACCGCCGTCTAATTCAGATTCCGACGCTTCTTCCTTGATCAGAACTTACCGCGCCT GGAAAGGCCATAACGTAAGTTCAAATTCTCATCGTTTTCATCACTTTTCACTTCGTTGAATTTTACGGCGTTTTGATTTT TCGAGTTCAATTTCGAGTTCTGTCAATAGCAAAATTGCTTAAATTCTTAGCTGGAACATGAGTAATATTGTTGATGCTGA TGCAGAGAGAGCTTCTCTGCCAGTTATGCTTCCTCCTTTTCCGTTATCTGAGGATGCCGCAATTAGCTTGTGCTGTTTTG TTCTGATCAATAAATTTCGTAACATTCCTTCCAAAAATAGTCAAATACCATCAAAGCTACCATGTATGCTACCAATTTTA TCAAATCAAATTTTCAATTGAATTATATTAGGGAATTATAGCTAGGTTTTCTTTAATCTGCACTATTAGTTGTAAATTAG CAAGTTCTTGAAACTAATCAAGTGCATCATTCTATTTGTTGATTAATGTGTTGGTTTGTTGTGTTGGTATTGTGATTTAA ATTTTTCAGGTATTTTTGCTTCGAGGGAGGCTTATATTTGGACCCGATGTGAAATCGATATTTATTTCGCTATTTCTTAT TATTACCCCTGTTGCTGTGTTCTGCGCTTTTGTGGCAAGGAAACTGGTAGATGACTTTCCTCATCACTCCGGATGGTCGA TACTGGTCATAGTTATTGCTCACACGCTGTTTGTAAGTTCAATTTTGTTTTAGAATCTGTCCTCATTTGTTGATTGATGA AAACATGGCTCCTATTGAATTGATGCGTCGTGTTCTCTTGTTGTATGTGAAGGGCTGTCACTATCTTTCTTCAAGTTACA GCTGTTAGAACTTAGAAGCTTAGAGGTTCCTTCATGGACCTAACACAGTGCCAGAATTTTGTGTTATTTTTATATTATAA TGTAGATATTTACTCTAATTAAAGGCATGTTGACCTAGGTCTCTTGATCGCTTAGTTTCACCATACTTTCGTTGAACTGA AATGCTGAATTAAGACTGCAATTTCCTTAAGGATGTCCAAACAGCATATTCTATCAAGCCCTTACATTCTAAATCCAAGA GTTCTCTTTATCACTGCGATAGGTTTTGGGCTTGAGCATGTTTGGATTTGATTATTTTTGGTGAACTATTTGTCTTTCCC CCAAAAATTATTGTACAAAACTTTTGATCATAAGTATTTTGTACACAACATAAGCTTATCCCTATATAGTACATGTTAAC TTTCAGTGCCTTATAATTCTTTCACTTTCTTATCACTGAATAATCCTGCTAAGGAATTAAGAATGTGACTTGTCTTCTAA GCCACCCAAGGAGATATAATCTTTAGCCACCCAAAGAGACAATATTTCACTGTATGAATTAATTTTATAAAGATTATATC TGGATTCTGCAAAAATTCCAACCTGTTTTCATATACTTAATTTGAAAACATGCTGCTAGCTCGTATATTGCACAAATTTA AATTTAGGACTGTTTTTTTATTTATTTGAGAAGGAATGGGAGGTGCTAGTATAGTGGAGAAAAATATCATAGGTACTGAT TAATATTAGTCAGCTATAAAGATCTTGTGTACTGCTATTTTAATAGTCCACTGAATAAGCTTTACAAACTGTAGCATTTA GTTTTCATTCTTAAACTTCTCATAGTTGAATAAAGCCATCATCATTTGTGTGCAACTCTGATACATTAATGAAAACCATC ACCAATCCCTACTCAAAATAAGATGACAATGATAGTTAATATAGGAATTTTCAAATTTCCGCATAGATTACTTTTTCATT GGTTAGCTAGATGCGTTACAGCATTATGTTTCTCATTCACCACTGTGCTTCTAAGTCTTGAAATGTATTCACAGGTTCTG ATCGCTCTTCTCCTGACTTCAGGAAGAGATCCAGGCATAGTACCTCGTAATGCACATCCTCCGCAGCCAGATGACCATGA TGCTGCTGCCAATATCAACAATGGACTAAGTCCACGGGGACGTTTACCACGGACGAAGGATGTCATTGTCAATGGCATCA CTGTGAAAATCAAATATTGTGATACTTGCATGCTCTATAGACCCCTCCGTTGTTCTCATTGTTCTGTATGTGATAACTGC GTGGAGCGATTTGATCACCACTGCCCATGGGTGGGGCAGTGTATTGGATTGGTAATGGCTTTTCTTTCATATCCTTACAT TGATTACATTGATGGGACCAATGAACACCGTCTCGGTCATTTGAATATTAAGTTTTTGGTTTCCATATAATTTGTTAACT TTCCTTTGTCTCACAATCCTGCTATTTGATGAAAATATCTTCTTGGTCCCCAAACAGTCAAAATCAATTTTACTGGGACT TTTGAACTCTTAGTTTAGAACACTGATCATAGTCTTAAATACATATTTTTTAATCTCTGCCAGAAAAAAATAATTAATGA CTTTTTTTCATGCCTATTGGTATTTTTTCTGCTTTCATGTCAAGTATCACTTACAATGGGACATGCAGGAGGACAAACTT TTTCAAAAAATGTACTTGTATTAGATATGAATATGATAATGAAGTTGATATCTTTTTGCCCCTCCTCTTGTATGTACTGG CTGCAGCGAAATTACCGGTTCTACTACATATTTGTCTTCTCTGCAACTCTTCTTTGCTTATATATACATGGCTTTTGCTG GGTCTACATCACGAGGATCAAGAACTCGGAGGAAATATCAATTTGGAAAGCAATGACCAAAACTCCTGCATCTATTGTTC TAATAATCTACAGTTTCGTTTGTGTCTGGTTTGTTGGAGGCCTCACTGCTTTCCACACGTATCTCATCAGCACTAACCAG GTTTGAATTTTCGTTCACCTCATAATCATGTTGTGGCGCATTGCATTCTTAGTTTGGTTTTCTTACACTTGTTAATGAAA AATCATTTTGTTTTATGAGCAGTCTACTTATGAAAACTTTAGATACCGGTACGATCGACAAGTCAACCCATACAACAGAG GGATAGTTAACAACTTCAAAGAAGTGTTCTGCACTAGAATTCCTCCATCTAAGAACAAATTCAGGTCCAAGATTCCAAAG GAGCTACCAGATGCATCTCAAGGAGTTGGTGCTCGGACCCTGAGTCCTCTGATGAGAAAATCCACAGGGAACATGGAATT AGTAGGGAGGAGAGTTTATATTGATGAGCCTAACGATGATGATACCAGAGATGTGTTTAGCAATGAGGAACATAGCAGCA AGGATAGTGGGGAGAGACAAGATATTTGGTATCTTCACCAAAAATCAGACATAATTCCTGAAGTCCATGACAGAGTACAT GAAGTTGGGGAATCAAATTGTGCTGCTAGTGAAAGTAGTAGTGGGCCTAATGGGAACACAACTACATAGTGCATACTGCA TAGTCTCAGCATGTCAGAATATATTAAAAGTTCAGACGAGTAACAATGGGCAAAAGAAAGTTTTTTTTTTTTTTTTTTTT TTTAATTTTTTGGGTTAAAGTTCGATTTGATAGGGAAGTAATGCTTGTGTTTTTTACCTTTGTTAATTCTGGAGCGTGGT TGGATTTTGCTTCACCGATTCTAAGATCGTCTTATGGGGAATGTGGTGATGAATTTGTGTACAGCAGAAGAAAAAAAGAA TTTATAGAAAATTATTGAATCTGTACATCGCACCTTCTATATTTTCATTTGCTTTTCCTTTGTTCCCGAAGGATAGCTCA AGTAGTAAGAACTGATGGACACATGAGTTGGGGAGGGGTAAGTTCATGGGTTTGTAATTTATCTTTTACGATGTACTAAA ACAAAATTGTTTTTCATTTATCTTGTTCTTTAGAAAATTCCATAGCTGGCGGCTGCTATTGATGCGTTTTTGTGATAAAA TGTGGGTTAAGTGTGAATATAACTCACCATACTTTTTGCGCACATTTAAAATTTCTTCTATAATTGATTCTAGAATAAAA TCAATTTTGTAACCTTAACTAATTATGAAGAGAAACCGAACTAATTTCGGAAATAGAAAAATAGATTCAAAGGTATTTTA ATAAGCTAACACTTGACCAAAAAATTACTTAACCATTCATGCGATTCAAAGGGGCTGTCACAACTCACAAGTTAAATT
CDS sequence (LotjaGi4g1v0419700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCCGCCGCAACCGCAACCACAACCACCGCCGTCTAATTCAGATTCCGACGCTTCTTCCTTGATCAGAACTTACCGCGC CTGGAAAGGCCATAACGTATTTTTGCTTCGAGGGAGGCTTATATTTGGACCCGATGTGAAATCGATATTTATTTCGCTAT TTCTTATTATTACCCCTGTTGCTGTGTTCTGCGCTTTTGTGGCAAGGAAACTGGTAGATGACTTTCCTCATCACTCCGGA TGGTCGATACTGGTCATAGTTATTGCTCACACGCTGTTTGTTCTGATCGCTCTTCTCCTGACTTCAGGAAGAGATCCAGG CATAGTACCTCGTAATGCACATCCTCCGCAGCCAGATGACCATGATGCTGCTGCCAATATCAACAATGGACTAAGTCCAC GGGGACGTTTACCACGGACGAAGGATGTCATTGTCAATGGCATCACTGTGAAAATCAAATATTGTGATACTTGCATGCTC TATAGACCCCTCCGTTGTTCTCATTGTTCTGTATGTGATAACTGCGTGGAGCGATTTGATCACCACTGCCCATGGGTGGG GCAGTGTATTGGATTGCGAAATTACCGGTTCTACTACATATTTGTCTTCTCTGCAACTCTTCTTTGCTTATATATACATG GCTTTTGCTGGGTCTACATCACGAGGATCAAGAACTCGGAGGAAATATCAATTTGGAAAGCAATGACCAAAACTCCTGCA TCTATTGTTCTAATAATCTACAGTTTCGTTTGTGTCTGGTTTGTTGGAGGCCTCACTGCTTTCCACACGTATCTCATCAG CACTAACCAGTCTACTTATGAAAACTTTAGATACCGGTACGATCGACAAGTCAACCCATACAACAGAGGGATAGTTAACA ACTTCAAAGAAGTGTTCTGCACTAGAATTCCTCCATCTAAGAACAAATTCAGGTCCAAGATTCCAAAGGAGCTACCAGAT GCATCTCAAGGAGTTGGTGCTCGGACCCTGAGTCCTCTGATGAGAAAATCCACAGGGAACATGGAATTAGTAGGGAGGAG AGTTTATATTGATGAGCCTAACGATGATGATACCAGAGATGTGTTTAGCAATGAGGAACATAGCAGCAAGGATAGTGGGG AGAGACAAGATATTTGGTATCTTCACCAAAAATCAGACATAATTCCTGAAGTCCATGACAGAGTACATGAAGTTGGGGAA TCAAATTGTGCTGCTAGTGAAAGTAGTAGTGGGCCTAATGGGAACACAACTACATAG
Protein sequence (LotjaGi4g1v0419700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MPPQPQPQPPPSNSDSDASSLIRTYRAWKGHNVFLLRGRLIFGPDVKSIFISLFLIITPVAVFCAFVARKLVDDFPHHSG WSILVIVIAHTLFVLIALLLTSGRDPGIVPRNAHPPQPDDHDAAANINNGLSPRGRLPRTKDVIVNGITVKIKYCDTCML YRPLRCSHCSVCDNCVERFDHHCPWVGQCIGLRNYRFYYIFVFSATLLCLYIHGFCWVYITRIKNSEEISIWKAMTKTPA SIVLIIYSFVCVWFVGGLTAFHTYLISTNQSTYENFRYRYDRQVNPYNRGIVNNFKEVFCTRIPPSKNKFRSKIPKELPD ASQGVGARTLSPLMRKSTGNMELVGRRVYIDEPNDDDTRDVFSNEEHSSKDSGERQDIWYLHQKSDIIPEVHDRVHEVGE SNCAASESSSGPNGNTTT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 12 | 362 | 351 | 1.6E-201 | – | |
| PANTHER | 12 | 362 | 351 | 1.6E-201 | – | |
| TMHMM | 49 | 68 | 20 | - | – | |
| Phobius | 49 | 68 | 20 | - | – | |
| Phobius | 69 | 79 | 11 | - | – | |
| Phobius | 80 | 101 | 22 | - | – | |
| TMHMM | 81 | 103 | 23 | - | – | |
| Phobius | 102 | 196 | 95 | - | – | |
| Pfam | 152 | 277 | 126 | 1.2E-36 | ||
| ProSiteProfiles | 153 | 203 | 51 | 26.758 | – | |
| Phobius | 197 | 220 | 24 | - | – | |
| TMHMM | 197 | 219 | 23 | - | – | |
| Phobius | 221 | 239 | 19 | - | – | |
| Phobius | 240 | 261 | 22 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 262 | 418 | 157 | - | – | |
| MobiDBLite | 349 | 377 | 29 | - | – | |
| MobiDBLite | 390 | 418 | 29 | - | – | |
| MobiDBLite | 402 | 418 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Palmitoyltransferase activity | Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. |
Expression pattern of LotjaGi4g1v0419700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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