Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0271400 |
| Transcript ID | LotjaGi5g1v0271400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | S-acyltransferase; TAIR: AT5G04270.1 DHHC-type zinc finger family protein; Swiss-Prot: sp|Q500Z2|ZDH20_ARATH Probable protein S-acyltransferase 15; TrEMBL-Plants: tr|A0A0B2NUQ6|A0A0B2NUQ6_GLYSO S-acyltransferase; Found in the gene: LotjaGi5g1v0271400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58509649..58513936) extracted from Lotus japonicus Gifu genome v1.2.
TTGTATCTCTACCAGTGTTGGCAGTGTTGTTGTTGATGCTTTTTGTGTATTACACTACAATCTTCATCTTCCTCCATGAT TGGCTCAGTTTACACACCTCACCTGGAACCTTGAATGCCTCCATCTTCACCCTCTTCGCCTCTCTCACCATTTTCTCTTT CTTTGTTTGCGTCCTCACTGACCCGGGTCATGTTCCTTCTTCCTACGTTCCTGATGTTGAGGCCAGAGATTCCAATTCCC ATCAATTTGCCAAAGATGTAAGCTTTTCCGCATTCCCATGTGGGGGATTCAACTGGGTCGTTTTCAGCTAATGCTCTCTG CTTTGTTGGATTTGTGTTTGATCTGAGGAATGAAATTTTTTTCCTTTTTTCCTAATTGGTATTTTAAGGAACAGACTGAT TGTATGTTATAGTAGGAATTTGCACTGAAATTATCTGAATCTTAATTGCTTTGTAAATTGACAATGGATCAATGCTGTTA GGGTTATGATTTAGCTATTATGACCAGTGAACAATTTACAGAGCTTAACTTACAACTTATAGCTGTTTGCATTGCACTCA TGACTCATATTTCTATGATCAGATACTCTGTGACATTTACCTCCAATCAGGGTTTTTTATGGTCAATGATTTAAGTGTTG TTTTTACTTCATAATAAATTGATGATGTATTTGTGACAGAATAATTTGTTGATGTTTTTATGTCGCACGTTGGTGATCTA CTTTGTTTGATCCGTTACTGAGTTCCTTAGCAATTTGTTGCAGAATGCAGAACGGAAGAAATGTGACAAGTGCTTTGCAT ACAAGCCTCCGAGGACTCATCATTGCAGGGTCTGTAGAAGGTGTATTCTGAAAATGGTAGGTCAGTTGTTTGCCAACTAT GGATGTTATTTTTTAAGGTTCAACTTCGCATTTGAGTTCATGAGTTAAGGGTTTATTCTAACCTTTTTGTTTGGTTGCTG AATTTGATGTAGGATCATCACTGCTTGTGGATAAATAATTGTGTTGGTTATTGGAATTATAAAGCATTTTTTGTTTTTGT ATCATATGCCACCATAGCAAGTCTTTATTCTATGGTACGCTTTCGATATGCTATCTACTTTTTTTAATAATGGAAAAGGA TCCTATTTGACATAAGCTTTGGCAATGGTCAGGTTATATTTATAAGCTGCGTGTTTCAGAAGGACTGGCAACCCATTAAG GAGAGTTCTCTTAAGATCTATTATGTAAGTTCTAATTTATGAATTTGTCAATATTAGTTGTATTCATGTTATTTCACGTC TCTTTCTAATTCATGTTATAACATGTCTCTTTCTAATCGTTCCAATAGTAAATACTGAATCAGATAATCCTAGTTTCTTT TATCATCCAATGTCACTGCTGATGCATTTTCTTAAGTTGAGAGAAAACTCTTTGCTTTTCCTTTGTTAGTTTGCACTTTG CAACAATTATATTTTAACTTCTTCAAACTCGGTATGTATAAGCACACATAATAAGCTTTATAGTTACTTCCTGATAAAAT TTTCTGAGTTAAAATCTCTTGAGTCATAGCATCCTTTGTGTTGATCCGGAAAATGATGGAATCACATCTAATTAGTAGTT GGTGCCCATCTATTTTCAACTGTCACTATACTCATGTCCTACATAAGATACAGGTTGAAGACTTTGTTTTCTACTAATGC TTGGGATAAAAATGTTGGTAATGCTTAATATAAGACTTTGTTTTATTTTGGCTTGAACCTCCGATACATTATCGCTGCAC TATGCATACTTTACACGCACCTTGAAAAATTGTTTGGCGTCGTAGGCATTATCTATGCTACAAAGAACTGGAAGTTTCTT CCCCTTGTGCAAGCCTATTCTGATTTGATGCCTGGTTCTGAGTAGGAAAAAAATCATAAAATCATCCTTTATTCAGTAAA AAAGGCCCTAGTAACATTTTTTTCAATTGTTTTTGTTAGTTTACTCTTCTTCACATCCCATACGAAAACAAAGTAGGTTT TTTGAGACATTTTTTATGGTTGAAGAATTCATTTTCAGAATCAAAGTTCAGGGTTCTTTTTGTTAAATCCTTAAACATGA GGATAGTTTGTACATTATCCCTCTTATTTTTGTGAACAAGTAAGGAAAGAAAGACTTAAGGACACGAAATGGTGGAGCCC AAGACGTGTATTGAAACCATATTTGGGACAATGTCCAAGATACTGAACTTGTCCGATTACTTAAAGTGAACACCTTTTGT CTGGTACTATCCTTGGTTTCCTCCTGTTGGAGATAGTATAACCCATCCTGTTCCTTAGAAACTCTGATCATCCTCCTCAT GGCAAGATTATAAAAGACACAACGAGTGTGGAAAAATATCATTGGATAATTTAAATCTTTGGTGGTTTTTTGTATAGACG CAAATTATTTAAGTTTAGGGACATGAAGCACATTATTTAAGTGGAGAGGGTAGGAGTTGAATGGTACCACATCTGGTAAT TGGGATATTGGATCCATTGGTTACAATGATGTGTTTATCTGGTAAAATGGTCTAGTGACTTTGTCTGTGGTAGGAGTGGC TCGAATGGATGCCAATACTATGGTGCGCGTGTTACACATTCTGGAGACGAAAGCTGTGTGTGGAAATGTTTCCTGTTCAA GGGCCGCCTGGATGTGGTGATTCAGTCTTGGGCCGATGCCAGGCTAATCCTGGTAGTAGCAGTTGTAGTTGCATGTATTA AACAGTTGCACTCAGTGTTGGTGGCTAGTATTTAGATGCGGAAGTAGAGCTCCCTGAGATCAGGAGCTCTAATACCAAGT TAGGGAGATAATGGGAGCCACAAAGTAGAGAAACTTGCACCAATGGGCCAAAACAGCGAAGCACCTAGAGAACTTGACAC TATTTTTACCAAAAACCTTAAGGTATTGGGCATATGGGTATGTTCTCTTATGTTGTGTATCACTAACCAATGTAGTAGTC GAAACTCACTTGAAAAGCCAATAATATTATTTTTATCACTAGTAATTAGTAAATGATGAAACAACACATTTGCTCAATTT CTTTATTCTGTTGATGTTTATAATTGAAGTCAGAGATTGTGAATTTATTTTTGTTAACTACTGACATGGGTTTTCTGTTG AAAAAATATACTGAAAACTTGAATAGCTGTTTCTTCTTCTTTTTAATCCTTAATTTTCTTAAAATATAAAAATTAACAAC TTATGAATGATATCTAGGTCTTTTATGGAGTGATGATTACGGCCTTGACTATAACGCTTTTAACTCTGTCTGGATGGCAT GTCTACCTTATCCTTCATAATATGACAACAATAGAGGTGGGTTTTCAGTTGGATGTAATGTACTCCATTAAAAAAATCTT CTCTTTATTAATGGCTTGGGAGTTGTCAATTTGTGCCCTTTTTCAGTATTATGAAGGAATTCGTGCAAAATGGCTGGCTA TGAAGTCTGGGCAGAGCTACCGGCATACATTCAATCTTGGTGCATACAAAAATATTACTCTGGTCTCTCCCTATTCTTTG TGGTCTTGTTTGGCACTAGTTTGCATGTACAGGCTGATAGTTCTTACCTAACAATATATTTTTTCTTCTATTTCTTGACC AGATTTTAGGTCCAAACATGTTGACATGGTTATGTCCCACTGCAGTCGGCCATCTCAAGGATGGAGTTAGCTTCCCCGCA TCACGCGAAAATTGATGAACCTTTGTGGTTCGACCAGGTCCTGAATTAACCGCAGGTCATGCCTATTGGTCTTGATTCTT GGACTTTTGAATTAAGAGCTTCCTCATCTAAATTTGGTAATCAGCAAAGGTTTGAAGAGTAGAGGTGGTTGATCCTTTAT GCAATCATTGAAAAGTAAGCTTACACTATCCTTTGATCCTCTACAAAAGTATTGAATGCTGGCCTTTTACCATCTAGACA CCATCATAGGATGTAGTCTTGTAGAAAATGAAAGTTATTTGGAGATCATGTAAATCACGTAACAAAAAATTTCTTTGATT TTATTCCCGAGTTCTGACAACAAAATACGGTTCTAGCACACATTTAGAGTATTTGGATTTTTGTCACAAGGGTCTTTTCA TGGTGTTATTGGGGAGTTCCTAGACTCTAGAAATTTTCATTTGTAGGTTCAGCCATACACATACTAGTTGCAATATCTTT CCTTGTTATCTTATGATTGAGAAATTACCTCCATTTTTGGATTTCCTGTATATAACATTGAATAAGATCAGTCCAGTTCC TGTGTCATGAGTCATGACTTAATGATAGCGTTTGCATACGAGCCTTTA
CDS sequence (LotjaGi5g1v0271400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTTTTTGTGTATTACACTACAATCTTCATCTTCCTCCATGATTGGCTCAGTTTACACACCTCACCTGGAACCTTGAA TGCCTCCATCTTCACCCTCTTCGCCTCTCTCACCATTTTCTCTTTCTTTGTTTGCGTCCTCACTGACCCGGGTCATGTTC CTTCTTCCTACGTTCCTGATGTTGAGGCCAGAGATTCCAATTCCCATCAATTTGCCAAAGATAATGCAGAACGGAAGAAA TGTGACAAGTGCTTTGCATACAAGCCTCCGAGGACTCATCATTGCAGGGTCTGTAGAAGGTGTATTCTGAAAATGGATCA TCACTGCTTGTGGATAAATAATTGTGTTGGTTATTGGAATTATAAAGCATTTTTTGTTTTTGTATCATATGCCACCATAG CAAGTCTTTATTCTATGGTTATATTTATAAGCTGCGTGTTTCAGAAGGACTGGCAACCCATTAAGGAGAGTTCTCTTAAG ATCTATTATTATTATGAAGGAATTCGTGCAAAATGGCTGGCTATGAAGTCTGGGCAGAGCTACCGGCATACATTCAATCT TGGTGCATACAAAAATATTACTCTGATTTTAGGTCCAAACATGTTGACATGGTTATGTCCCACTGCAGTCGGCCATCTCA AGGATGGAGTTAGCTTCCCCGCATCACGCGAAAATTGA
Protein sequence (LotjaGi5g1v0271400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLFVYYTTIFIFLHDWLSLHTSPGTLNASIFTLFASLTIFSFFVCVLTDPGHVPSSYVPDVEARDSNSHQFAKDNAERKK CDKCFAYKPPRTHHCRVCRRCILKMDHHCLWINNCVGYWNYKAFFVFVSYATIASLYSMVIFISCVFQKDWQPIKESSLK IYYYYEGIRAKWLAMKSGQSYRHTFNLGAYKNITLILGPNMLTWLCPTAVGHLKDGVSFPASREN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 25 | 25 | - | – | |
| PANTHER | 2 | 160 | 159 | 4.4E-98 | – | |
| PANTHER | 2 | 160 | 159 | 4.4E-98 | – | |
| TMHMM | 25 | 47 | 23 | - | – | |
| Phobius | 26 | 47 | 22 | - | – | |
| Phobius | 48 | 122 | 75 | - | – | |
| Pfam | 75 | 189 | 115 | 7.2E-30 | ||
| ProSiteProfiles | 79 | 129 | 51 | 26.674 | – | |
| Phobius | 123 | 143 | 21 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Phobius | 144 | 225 | 82 | - | – | |
| PANTHER | 164 | 225 | 62 | 4.4E-98 | – | |
| PANTHER | 164 | 225 | 62 | 4.4E-98 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Palmitoyltransferase activity | Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule. |
Expression pattern of LotjaGi5g1v0271400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…