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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011004
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We have found 67 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 5.734s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi3g1v0496500.1
n.a. Acyl-CoA ligase-like; TAIR: AT1G20480.1 AMP-dependent synthetase and ligase family protein; Swiss-Prot: sp|B2HIM0|FAA28_MYCMM Long-chain-fatty-acid--AMP ligase FadD28; TrEMBL-Plants: tr|A0A0B2QZ83|A0A0B2QZ83_GLYSO Long-chain-fatty-acid--AMP ligase FadD28; Found in the gene: LotjaGi3g1v0496500 LjG1.1_chr3 91454812 91462036 -
2 domain predictions
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LotjaGi3g1v0509800.1
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92687891 92699627 -
2 domain predictions
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LotjaGi3g1v0509800.2
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92693994 92698311 -
2 domain predictions
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LotjaGi3g1v0509800.3
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LJC2|I1LJC2_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92694381 92695555 -
2 domain predictions
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LotjaGi3g1v0509800.4
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92694381 92697829 -
2 domain predictions
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LotjaGi3g1v0509800.5
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92694381 92698297 -
2 domain predictions
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LotjaGi3g1v0509800.6
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT4G39210.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800 LjG1.1_chr3 92694381 92699022 -
2 domain predictions
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LotjaGi4g1v0353300.1
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1; Swiss-Prot: sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic; TrEMBL-Plants: tr|Q9AT08|Q9AT08_CICAR Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi4g1v0353300 LjG1.1_chr4 73179775 73191079 -
2 domain predictions
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LotjaGi4g1v0353300.2
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT5G19220.1 ADP glucose pyrophosphorylase large subunit 1; Swiss-Prot: sp|P55229|GLGL1_ARATH Glucose-1-phosphate adenylyltransferase large subunit 1, chloroplastic; TrEMBL-Plants: tr|Q9AT08|Q9AT08_CICAR Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi4g1v0353300 LjG1.1_chr4 73179775 73191079 -
2 domain predictions
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LotjaGi4g1v0418000.1
n.a. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT5G63510.1 gamma carbonic anhydrase like 1; Swiss-Prot: sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial; TrEMBL-Plants: tr|I3RZK3|I3RZK3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0418000 LjG1.1_chr4 79336862 79340018 +
2 domain predictions
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LotjaGi4g1v0418000.2
n.a. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; TAIR: AT5G63510.1 gamma carbonic anhydrase like 1; Swiss-Prot: sp|Q9FMV1|GCAL1_ARATH Gamma carbonic anhydrase-like 1, mitochondrial; TrEMBL-Plants: tr|I3RZK3|I3RZK3_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0418000 LjG1.1_chr4 79336899 79344119 +
2 domain predictions
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LotjaGi5g1v0013300.1
n.a. Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GSV3|A0A1J7GSV3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0013300 LjG1.1_chr5 2903806 2909151 +
2 domain predictions
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LotjaGi5g1v0309800.1
n.a. Translation initiation factor eIF-2B subunit epsilon; TAIR: AT2G34970.1 Trimeric LpxA-like enzyme; Swiss-Prot: sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon; TrEMBL-Plants: tr|V7BQ00|V7BQ00_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0309800 LjG1.1_chr5 62790095 62799705 -
2 domain predictions
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LotjaGi5g1v0309800.2
n.a. Translation initiation factor eIF-2B subunit epsilon; TAIR: AT2G34970.1 Trimeric LpxA-like enzyme; Swiss-Prot: sp|P56287|EI2BE_SCHPO Probable translation initiation factor eIF-2B subunit epsilon; TrEMBL-Plants: tr|V7BQ00|V7BQ00_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0309800 LjG1.1_chr5 62790789 62799329 -
2 domain predictions
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LotjaGi6g1v0051600.2
n.a. UTP--glucose-1-phosphate uridylyltransferase; TAIR: AT5G17310.1 UDP-glucose pyrophosphorylase 2; Swiss-Prot: sp|Q9LKG7|UGPA_ASTPN UTP--glucose-1-phosphate uridylyltransferase; TrEMBL-Plants: tr|I1LM73|I1LM73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051600 LjG1.1_chr6 9246414 9254847 -
2 domain predictions
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LotjaGi6g1v0051600.4
n.a. UTP--glucose-1-phosphate uridylyltransferase; TAIR: AT5G17310.2 UDP-glucose pyrophosphorylase 2; Swiss-Prot: sp|Q9SDX3|UGPA_MUSAC UTP--glucose-1-phosphate uridylyltransferase; TrEMBL-Plants: tr|I1LM73|I1LM73_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0051600 LjG1.1_chr6 9248052 9249048 -
2 domain predictions
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LotjaGi6g1v0145100.1
n.a. Serine acetyltransferase; TAIR: AT3G13110.1 serine acetyltransferase 2;2; Swiss-Prot: sp|Q39218|SAT3_ARATH Serine acetyltransferase 3, mitochondrial; TrEMBL-Plants: tr|V7BNI1|V7BNI1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0145100 LjG1.1_chr6 41634638 41636507 +
2 domain predictions
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