Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0509800.2

Overview

Field Value
Gene ID LotjaGi3g1v0509800
Transcript ID LotjaGi3g1v0509800.2
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Glucose-1-phosphate adenylyltransferase; TAIR: AT2G21590.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|Q00081|GLGL1_SOLTU Glucose-1-phosphate adenylyltransferase large subunit 1; TrEMBL-Plants: tr|I1LQ25|I1LQ25_SOYBN Glucose-1-phosphate adenylyltransferase; Found in the gene: LotjaGi3g1v0509800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:92693994..92698311) extracted from Lotus japonicus Gifu genome v1.2.

GCGACAAACGTTGATCCATACGGGCAAGCTTCCCCCATAATAGAATATGAAATTTTACTTTCAAGTTTCAACTCACTTTT ACTATAATCAATTTTATCATAATCAATTGTGACAAACGTTGATCGATACACGCAAGCTTCTCACAAGAATAGACTTTTGC TTTAGAATCAATTGTAGAAGAATTTTGAAACATAGTCTTATGTCAATGTGGGTGCATTCTTTTGTATCTTATTTGGAAAG TGAATGTATTCTCAATTTCTCATTGAGGGTTTCAATTTCAGAGCATTCAAGTGCCAACCTTTCTCAGAAGAAAGGCAGAC CCTAAAAATGTTGTTTCCATCATATTGGGAGAACGTCCTGGGATTCAACTCCTTCCTCTTACCAAACGAGCTGCAACACC TGCTGTGAGTAAATCATTGTCTTGACTGAAAAAGCATCACTTTTGTTGGAGTTCCATGCTGTGATGAAACTGTATGCATT TTCAGGTCCCTGTTGGTGGATGCTACAGGCTTATAGACATCCCAACGAGCAACTGCATTAACAGTGGCATCAACAAAGTA TTTGTGTTGACCCAGTTCAACTCTGCATCTCTCAACCGTCACATCTCCCGCACCTATTTCGGAAATGGCATCAATTTTGG GGATGGATGTGTGGAGGTATGTCTCATGGAGTTGGATGGTAATTGTTAGAGGGCCGTTCACCATAATCTAGTTGATTTAT TTTGTAAGATATTATGCACTTTGGTTTCACAATTTGCACATAATCAAAGACACATTTGCGCAGAAGGCGAGACTTGTAGC TTCTAATCAGAAGTGATTCTAGTTCTATAACATTTCACCATGGAATCAAACATGCTAGCTATATCTGACTTCAAGTTGCC AATACACATTTTTGTTCATTCATGATGATAAAAGAAACCTAAATACTCTACAGGTTCTAGCGGCCACCCAAACACCAGGA GAAGCTGGCAAGAATTGGTTCCAAGGCACTGCAGATGCTGTGAGGCAATTCACTTGGGTATTTGAGGTGGGAACATAATT TTTGCATATATCAGATTTCAGAATGTACTGCATATCCTCAAGTTGAACTGGACAGTAATAGATTGAGTGTTGTAGGATGC CAAGCACACAAACATTGAGAATGTGTTGATCTTGGCAGGAGATCATCTATACCGTATGGATTACATGGACCTTGTGCAGG TAAAAGGTTACTTGTTTCATGTGTTGGATTAGTTATTCATTTCATTGTCACAGCTTTTAACTTAAAAAATTAAACAGAGT CATGTAGACAGAAATGCAGATATTACAGTATCATGTGCTGCAGTGGATGACAGGTGTGTTCAGTGCTCTTTTAGATGTGT TCCTTTATTTCCATGTTTGTTTGTTTGTTTGATATCACTTTATTTGAACTTCTAGCTATTTTACTTTTGTTTCACTACTG CGTATTTGATTGAGAAGGAAAGAGCCATGAGAAAAGAGGCATAGACACACTAACTTCCTCAAAAAAATTATTTCAAACTT AGTTTAATCTAAGTTTCATTTCTAATTGCATACTTTTTAGTCGAGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGA GGCCGCATCATCCAATTTTCAGAAAAACCGAAGGGTTCTGATCTGAAAGAAATGGTAAGTTCCAACTCTATAGCCTATTT GGCATTCAACTGAAGAAGGTTCTTGGTCACTATCTGAAAGCAAAAATTACGGCATGTTTGCATACACAGTAGATTTTCAC GTTGGAAGAAGGATTGATTATGAGAGAAGTTACTCCCAGTAGCTTGTGGTTGCAGAAATGATTTTTGAAGTTCTGAACTT GAATACAAACATGCTATACCACCCTCTATTTCAGTAGTCCTTTAAAACTGATCATCTTAGCACTACAGCATCTCCAGAGA AGTTCATACTTTATATTTGATATACATCATAGGATAACATCAAAATCTCTTGTACTAAACATGTTAATAACATGAAGATC TACATCTAAAACATACAGATATATATAGGCTTGATTATCAAACTTCTAATACAGTTGAATCCCATATTTGTTATTCTACC TTTCCATAATTATGAACTTTTTCTACAAACTTGCAGCCCCAAATTTTATTTCCATCTGCCCTCATTCTTTTAATGTGTTC CTTTTGCTTCTATGCAGCAAGTAGATACCTCTCTTTTTGGCTTGTCACCTCAAGAAGCATTAAAGTCACCATATATTGCA TCTATGGGGGTTTATGTATTCAAGACGGATGTTTTACTTAACCTTCTAAAATGGAGATATCCTACTTCGAATGACTTTGG ATCTGAAATCATTCCTGCAGCTGTGAAGGAATACAATGTCCAAGTAAGAAATTCCAGTTCGATATATCGCTTTTCATATT TAGATCTATTCTAGAAGGAGTCTTGTCTTCCATTTACAAGGGACTGATAACTCCTACGATGAGGCAACAACACAACTTGA ATGTTTTGTGCCTTTTTTCAGGGTTACTTTTTTGGTGACTATTGGGAAGACATTGGAACAATAAAATCGTTTTACGATGC TAACATGGCTCTTACTGAAGAGGTGGGTTAAAGATATTTACAGTTGGAAAATTTCTAATATAATGTTTTTCCTCTGATAC CATGCATTAGTCACAAGCCAAAATATCAAAGATGCACTAATGACACTATGACATAGTTACAATGACACTATGAACTCAAA TAGCTACTAGAATGTAGTAGCAATTTGTAGGAGAAGCTAATCTGTTTTATGTTACCCTCTAGCAGAATCCAATGTTCAAA TTTTATGATCCCAAGACGCCCATTTACACATCTCCAAGATTCTTGCCACCAACAAAGATTGATAAATGCCGGGTATGGCT ATGATCACTCATTTCAGAAGCTCTCTCTTAATTTAATAACATGTCTTGCTTATCATATTTGAGTTCCTCTTGCAGATTGT GGATGCAATAATTTCCCATGGATGTTTCCTGAGAGAAAGTAGTGTCCAACACTCCATTGTGGGTGAACGTTCACGTTTGG ATTATGGCGTTGAGCTCCGGGTAAACTACCATAATTTCTAGACCAAGGACACTAGAATTCTCTAATTAAAATTCCTACCA TCTAAGATCTCATTTTACAGGACACTATAATGATGGGAGCAGACTATTACCAAACTGAATCCGAAATCGCTTCCCTGCTA GCAGAGGGGAAGGTTCCCATTGGGATCGGAAAGAACACCAAAATTAGGTAATCATACTAGCAGTTACTACATCCTAACAT GGATAGCTAGACCACCTAATTCAATATGTTGGTTTTTGCATGAACCAACTATCTCAAAAGCTTAAGTTATTAGGTAAAGA CGTATACTGATTTTATATTATATTTCTAACACGTTCTCTCACGCTAAAACACATTAGGCTTGAACTCTAATGCCATGTTA TGGACCAATTATTCTAAAAGTCTAAGTTAGTTGAGTAGGGTGAAGATGTATCATATATGAATGATTTTGTGTTATATTTC TATCAGTTTTGAAACTTAAAACTTAAAAGTAAATACAAATAGTGCCTTTACCATGATGATAAAGAATTAGATTAGCATTT AGAATCTTCATGTTATAATTGTTATTTGTGTCTTTGTTGAAGGAAATGTATAATTGACAAGAATGCAAAGATTGGGAAAG ATGTCATCATCATGAACAAAGATGTGAGCATGGCTGCCCCCTATCTTCTTTTTTTACACAACTCATTACCCTTCATTAGT TCTTAGTTATAAGTATCAAGTTATCTATGAATAGTTTATCACCATTCAAATGCTTTGAGTTGAGTGTAGGGTGTGCAAGA AGCAGATAGAGCAGAGGATGGATTCTACATTAGATCAGGAATCCCTATCATAATGGAGAAGGCAACAATAGAAGATGGAA GAGTGATATAAGTCGGGTGTGTTTTACTTATTTCATGTGGCTGGTTGTCAAAGTAGCTGCAAGAAGCATTCCAAGGAACA CTTATCTTTGGGAACTGAAGAGTAGCAGAGAAGTTGCAATACCACGTTCAGCTGAAAAACCAGCAGTCATTTTTGCTGTA TGTGCAAAATAGAAGGCTACTTGTACAAATAGAATGTATAAATAAAATATGAAATCGGAATGTACAAAAGCAAAAAAATA AAGGTTATGTTTGGCACGCTTAGCTGATAAGCTAGCTGAAAGTTGATAGCTGAAAAGCTAGCTCATAGCTGAAAGTTGAT AAGCTAGCTGAAAGCTGAAAAGTTACGTAATTGTAACAAATGTGTTTGGTAAAATTAGCTGTTGAACAAGCTGAAATT
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0509800.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGATTACATGGACCTTGTGCAGAGTCATGTAGACAGAAATGCAGATATTACAGTATCATGTGCTGCAGTGGATGACAG TCGAGCATCAGATTATGGATTGGTCAAGGTAGATGGCAGAGGCCGCATCATCCAATTTTCAGAAAAACCGAAGGGTTCTG ATCTGAAAGAAATGCAAGTAGATACCTCTCTTTTTGGCTTGTCACCTCAAGAAGCATTAAAGTCACCATATATTGCATCT ATGGGGGTTTATGTATTCAAGACGGATGTTTTACTTAACCTTCTAAAATGGAGATATCCTACTTCGAATGACTTTGGATC TGAAATCATTCCTGCAGCTGTGAAGGAATACAATGTCCAAGGTTACTTTTTTGGTGACTATTGGGAAGACATTGGAACAA TAAAATCGTTTTACGATGCTAACATGGCTCTTACTGAAGAGAATCCAATGTTCAAATTTTATGATCCCAAGACGCCCATT TACACATCTCCAAGATTCTTGCCACCAACAAAGATTGATAAATGCCGGATTGTGGATGCAATAATTTCCCATGGATGTTT CCTGAGAGAAAGTAGTGTCCAACACTCCATTGTGGGTGAACGTTCACGTTTGGATTATGGCGTTGAGCTCCGGGACACTA TAATGATGGGAGCAGACTATTACCAAACTGAATCCGAAATCGCTTCCCTGCTAGCAGAGGGGAAGGTTCCCATTGGGATC GGAAAGAACACCAAAATTAGGAAATGTATAATTGACAAGAATGCAAAGATTGGGAAAGATGTCATCATCATGAACAAAGA TGGTGTGCAAGAAGCAGATAGAGCAGAGGATGGATTCTACATTAGATCAGGAATCCCTATCATAATGGAGAAGGCAACAA TAGAAGATGGAAGAGTGATATAA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0509800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MDYMDLVQSHVDRNADITVSCAAVDDSRASDYGLVKVDGRGRIIQFSEKPKGSDLKEMQVDTSLFGLSPQEALKSPYIAS MGVYVFKTDVLLNLLKWRYPTSNDFGSEIIPAAVKEYNVQGYFFGDYWEDIGTIKSFYDANMALTEENPMFKFYDPKTPI YTSPRFLPPTKIDKCRIVDAIISHGCFLRESSVQHSIVGERSRLDYGVELRDTIMMGADYYQTESEIASLLAEGKVPIGI GKNTKIRKCIIDKNAKIGKDVIIMNKDGVQEADRAEDGFYIRSGIPIIMEKATIEDGRVI
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR43523
1 300 300 3.4E-195 –
PANTHER
PTHR43523:SF16
1 300 300 3.4E-195 –
Pfam
PF00483
1 146 146 3.1E-35
IPR005835
SUPERFAMILY
SSF53448
1 261 261 6.52E-38
IPR029044
Gene3D
G3DSA:3.90.550.10
1 165 165 1.7E-50
IPR029044
ProSitePatterns
PS00810
79 89 11 -
IPR005836
SUPERFAMILY
SSF51161
162 300 139 2.83E-24
IPR011004
Gene3D
G3DSA:2.160.10.10
166 300 135 3.6E-48 –
CDD
cd04651
168 294 127 4.89342E-26 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005978
Biological process Glycogen biosynthetic process The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues.
Subterm of
GO:0008878
Molecular function Glucose-1-phosphate adenylyltransferase activity Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate.
Subterm of
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016779
Molecular function Nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0509800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…