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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0013300 |
| Transcript ID | LotjaGi5g1v0013300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Glucose-1-phosphate adenylyltransferase; TAIR: AT1G27680.1 ADPGLC-PPase large subunit; Swiss-Prot: sp|P55230|GLGL2_ARATH Glucose-1-phosphate adenylyltransferase large subunit 2, chloroplastic; TrEMBL-Plants: tr|A0A1J7GSV3|A0A1J7GSV3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0013300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:2903806..2909151) extracted from Lotus japonicus Gifu genome v1.2.
GACCATTTAAAAAAACATACATTTCGATGCATGTTGATCTGAAAATTTCTATTTTTGGCTCCTCAATTCATGGTGTATCT TGTTTCTTAAAAATTTCACATTTTTGTGCAGTCACAGAGGTTCAGTTCTCCCAACTGAGAGATACTGAGAATGTTCATTT CTAACTGTGATCCTCTGGTGAATGCAGCCATGGATTCAGCTTTTGCAACCCTGAATGCTAATCTAGTCATAACAAACAAA GTTTCTAGCTTTTGGGGTGAGAATACAAGGGGAAATTTTAACACCAGATTTTGTAGCATCCCATCATGCCAGAGTTCAAA ATCTAGAAAGTCCAAGCCTGGTTTGGTATATGCTGTATACACACCAGACATCAACAAAGAGTCCTTGGTAATAACTGAAT GCAATACATTTTATAATGTGTTATTACACACACTAACTGATAAGGTTTCAAATTGCGGTCACGGTCGCGTCATAGTGGGG TCCTTCGTATTGTGGTTGTTGATAAATGTGGCTGTCGCAGCCGAGATCACAGTCACGGTGCAGTTTCAGACACCTCAAAA ACCTTGATGTTGCGGCCAAAATCACAGTCGCGGACTTTGATTTAAAACCATGCTAACAAGGTTTTAAATTGCATCCGCGG TTGCGATGCAAAATTGCGGGCATATGCAAGTTGCTCCTGATGTGGGGACTCCAAAACCCTTTACATTTCCGCAAATGCGG TTTTAGGGTGCAATTTAAAACCCTGCACCCCAATATCATCACAGTGTGCTTATGTGTGTTTATTTTCTTCATTTCATTGC CATTTTAAAGCCAAAGCCAAGTTTTTTATCTAATTATTATTACTAGTGTTACTTAATTTGTTGGTTGGTTTAGATGCTTA CTAGCAATGCTGCCTTTGGATTTTGATTTCAGACATTCCAAGGACCCATTATTCAGAGTCCAAAAGCAAATCCAGATAAT GTAGCTGCCATCATATTAGGTGGAGGTGCTGGAAAAAGACTCTTTCCTCTTACAAGCACAAGAGCTAAGCCTGCTGTATG AGTTGTTTGATTTGTATCATTTTTCCACAGAAATGAATTGGTTGAATGCAAATTTCTGAATGTGATGAAGTATGCAGTAG TTGATAGTTTCAACCTGTTTGCAGGTTCCAATTGGAGGGTGTTACAGACTCATTGATATTCCAATGAGCAATTGCATCAA CAGTGGAATCAGGAAAGTATATGTTTTAACACAGTACAACTCTTTCTCCCTCAATGGCCATTTGTCTCGCACATATAATT TTGGAAATGGGGTGAATTTTGGAGATGGTTTTGTGGAGGTGAGTTATTCCTAATGTATCAAAGAAGTGAGATTCATTATC TTCTAGGAAATGGTTTGACTAATGAAGTTTGAAGAAATTTATTGGTGAAACCTTGTTATGATCTAAGGATTTATAATTTA CATGGGAACAGGTCTTGGCTGCTACTCAAACTCCTGGAGAGGCAGGGAAGAAATGGTTCCAAGGGACAGCTGATGCTGTG AGACAATTTATATGGGTTTTTGAGGTAAACTACTTTATTTTGTATGGCGTCAGAAGTATAATAGAAAACCATTCATGTGT CTTGACTAAACAACTTAAATTTTTGAGATTATTAGTTCATGTTAAGTTATAAGAGCATCTATAAGTGTGTTAGGATTCCA GTTGAAAGCATATTCAACTTGGATATTTGGCTTTCCAAGACAGCTTTCCAACTGAGAAAAGTCGTTGGATCGAGAAAAAG CACATTCACATTCAATCCAGTAGATAAACAAACACACTGGTCTAGAATTTGCCTCCTGTTTCCCCATTATTCTAATAAAA AAGTTTAATTCAGTACATGTGCATTGTCTCTTTATCCAACAACATAAGCTTTGGGATAATTGGTTTTTGATATTGAAATA TGGTGCTGCATATATGCTAAAAATATCACATTGGTAATATGGAATAAATGTTTGTGTGGATTGCCATGCAGGATGCAAAG AACAAGAATATTGAGCATATAATGATAATTTCTGGTGATCATCTTTGCCGAATGGACTACATGAAGCTTCTGGAGGTACA TGGACAAATTCTCATCTACAATCACATCTTAGAGTGGTTATAGTTTTATAAAACTAATACTAATTGATGAGGACTACACC TGCAGAAACATATATGGACAAATTCTGATATCACAGTTTCATGTGTACCCATGGATGAAAGGTATATAAATCTTATGATT CTTATATCTCAATTAAGGCATGCCACACAATTTGGAAGACGGAGAAAACTCCACTAACAATAATCCACTTTTTATTAGTT TAATAGCTAACAGTGTAAAATAGTTTTACATAGACATGCAATTAAGATTCACTATTTTGCCACATCATAAATAAATTAAA ATAAGAAAATATCAAAAAAGAAACACGGTAAGATATGATTGGATGTCTATATAAAACTCTGTACATTATGAGTGTCTATA GATTAAATCCTTTTTTATATATTGATGTTGGAGTTGATCACTGTTAGTTATCTATCAGCCATGCATCAGACTATGATCTG CTGAGAATTGATAGAAAGGGACAGATTATTCAGTTTGCAGAAAAACCAAAAGGATCAGATCTTAAGGCAATGGTATATTA TTAGTTCCTCAACACAATGTTCATTTTGCTTCAATGAATATGGTCATGGATTGTTGCCTAGCTGATCAGAATTGTCACCT TTGATGATTGCAGCATGTTGACACCACTCTCCTAGGGCTTCCTGCAGAAGAAGCGCGAAAACATCCTTACATTGCATCCA TGGGTGTTTATGCATTCAGAACTGAGACCCTGCTGAAGCTATTAAGATGGAGCTGTCCTTCATGTAATGATTTTGGCTCT GAACTTATCCCATCTGCTTTGAGAGACCACAAAGTCCAAGTGAGAGGGAACTCCAACCATGGATTTGTTACCTATATTCT TATGGATGTTCAATATTAAATCTTTGATATTGCGAGTGAAAATGGATCCTTTTGGGTTTAGCATTGGCATAATGTCTGTA TCTTTTTTGTTTTTTCAGGCATATTTGTTCAGGGACTATTGGAAAGATATTGGAACTATTAAGTCCTTCTTTGATGCTAA TCTGGATCTAACAGGACAGGTTTGTTTAAAGATCCTACAAATTTCTTCTGCATTTGATTCGTAATTTAAAAGGCTGTTTC GTTGACTATTTTGTCACTCAGCCAACTTGGATCGAACTCCAGACCATTTGGTCATATAATCTCTGATATCTTGTATAGAT CAATTATTTCAAAAATTTAAGCAAGTGAAGACACATGAATGTTATTATATTATACTTCCAACAGTGGTAACCAGAATGAA AGTTGGTAACAATTCAATTTAAAAACAAATTGAACACAAATGAGGAATTTGAATCTTTCCAAGTTTAGAAGAGTTTGAAC TAATTTACTACCAAGTTTTTGCTGTTAATGTTTATAATAGTGGACTTCATAATATTAATGAGAGAAATAAAGTTACAATT ACATTTTTTGTATAAGGCAAAATCTACTAATTTTACTGATCACATGCTCTATTACTTGCAGAATCCAAAATTTGAACTCT ATGATTCAAAGACACCTTTCTTCACCTCCCCAAGATTCCTCCCGCCAACTAAAGTAGTAAAAAGCAAGGTATGGAAGAAA GCTTAAACTAGTTTGCCTTGTAGATTTTAGCTTGCTGATGACTGCTTGATTTGTTTTTACAGATTGTGGATGCAATTATT TCTCATGGTTGCTTCTTAAGTGAGTGTAGTGTTCAACGTTCTATTGTTGGTGTACGCTCACGTTTAGAGTCCGGTGCAGA CCTTCAGGTAAACTTAGGCTGCATTTAGCAGAGCTTATTTGAGCTTATCTTGCCATATAAACGCTTATGCAAGTGTTTGG CTAAACTTATGAAAACAACTTATAACCTGCCTTTAAACTAGTTAAAGCATATTTTCATAAGCTACTTAGATTAGCTTATA AATAAGCATTTATACCTGCCTGTAAGCTATTTTGAGATTATTTCAACTAGTTTATCTGATTAGCTTATGAATAACCACTT ATGTAATAGTTATTATTTCCATAAGCGCTTAATTAAGGCATTTACCCAAACACACAATTACAATAATCTGTAGCATTATT TTTTTTAGATGGGGTGTTGGACTACTTGATAACCTAAATTTATATTCTTTGTAACAATCACATTTTTCTTCAATTTGGAT GCATGAGTTTAGAGTGTGTTTCGTTTCCCATTAAACGCACACTTAACTGTTTTCCCAGACAATTTTTCCAACTGAGCAAA ATTGTTGAACTGAGAAAGATCACATTGACATCCAATCCAATAGACAAGCAAACACACACTTTGTACCTTACAATACACCG CTTTCCGTTAACAGTTTCAGTGTCTCTTATTGCCAAATTGCAGAATTTGAAAAGTATAATTCAATGCACTCTTCTTAAGT GAAAAAATTAAGTGGTTGTTTGTCAAACTCTCCAACTAATTTATAGAAAGATTAGCACTAGAGGCCTCCATGATAAACAT ATATATGGCCAGCATATACTTCCAGATCTTATGTTATAACTTATAAGCTTTTCATGTACAATTTTGGCCCTGTGATGAAT GTATTTATGGCCTTTTCTATCCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATTCTGAAGTTAAATCTCT ACTAGCAGAAGGAAAGGTTCCAGTTGGTGTTGGAGAGAATACCAAAATCAGGTTCCATGATGTCTTTTATTGAATCCCAT TACATTTCTATGGAATTCCATCATATCTATATTATGTTGGAATTTCAAGTGTGAATGATGGAAGTTCCACATTTATTAAC ATTCCTTTGTTCATTTCTAATCTCTGCTGAATTCTTACTCCAATTTTTTTGAAGGAACTGTATAATTGACAAGAATGCCA AGATAGGAAGAAATGTTGTTATTGTAAACAGTGATGTAAGTGCTGCTTCAAAATCCTCACTATGAAAAATGCTGCAAAAG TTTAAAGCACTTGGTATTTTATCATGCTACCTTCTTTGCTGATTTAAACATTTTTGACTTCTCAGGGTGTTCAAGAAGCT GACAAGCCTACAGAAGGATTTTACATTAGGTCTGGCATAGTAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACCAC CATCTGAAGGAGCTGAAGATAAAAACTAGAGTAAAATTAGTTTGCTGATATATATAACTAAGTGTAACTAAAGCATAGAA AATACTCTCTTGTATATTACAAGTAAGTTACTGTCAATGGAAGAACTTTTAAACTATGGACTAATA
CDS sequence (LotjaGi5g1v0013300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCATTTCTAACTGTGATCCTCTGGTGAATGCAGCCATGGATTCAGCTTTTGCAACCCTGAATGCTAATCTAGTCAT AACAAACAAAGTTTCTAGCTTTTGGGGTGAGAATACAAGGGGAAATTTTAACACCAGATTTTGTAGCATCCCATCATGCC AGAGTTCAAAATCTAGAAAGTCCAAGCCTGGTTTGGTATATGCTGTATACACACCAGACATCAACAAAGAGTCCTTGACA TTCCAAGGACCCATTATTCAGAGTCCAAAAGCAAATCCAGATAATGTAGCTGCCATCATATTAGGTGGAGGTGCTGGAAA AAGACTCTTTCCTCTTACAAGCACAAGAGCTAAGCCTGCTGTTCCAATTGGAGGGTGTTACAGACTCATTGATATTCCAA TGAGCAATTGCATCAACAGTGGAATCAGGAAAGTATATGTTTTAACACAGTACAACTCTTTCTCCCTCAATGGCCATTTG TCTCGCACATATAATTTTGGAAATGGGGTGAATTTTGGAGATGGTTTTGTGGAGGTCTTGGCTGCTACTCAAACTCCTGG AGAGGCAGGGAAGAAATGGTTCCAAGGGACAGCTGATGCTGTGAGACAATTTATATGGGTTTTTGAGGATGCAAAGAACA AGAATATTGAGCATATAATGATAATTTCTGGTGATCATCTTTGCCGAATGGACTACATGAAGCTTCTGGAGAAACATATA TGGACAAATTCTGATATCACAGTTTCATGTGTACCCATGGATGAAAGCCATGCATCAGACTATGATCTGCTGAGAATTGA TAGAAAGGGACAGATTATTCAGTTTGCAGAAAAACCAAAAGGATCAGATCTTAAGGCAATGCATGTTGACACCACTCTCC TAGGGCTTCCTGCAGAAGAAGCGCGAAAACATCCTTACATTGCATCCATGGGTGTTTATGCATTCAGAACTGAGACCCTG CTGAAGCTATTAAGATGGAGCTGTCCTTCATGTAATGATTTTGGCTCTGAACTTATCCCATCTGCTTTGAGAGACCACAA AGTCCAAGCATATTTGTTCAGGGACTATTGGAAAGATATTGGAACTATTAAGTCCTTCTTTGATGCTAATCTGGATCTAA CAGGACAGAATCCAAAATTTGAACTCTATGATTCAAAGACACCTTTCTTCACCTCCCCAAGATTCCTCCCGCCAACTAAA GTAGTAAAAAGCAAGATTGTGGATGCAATTATTTCTCATGGTTGCTTCTTAAGTGAGTGTAGTGTTCAACGTTCTATTGT TGGTGTACGCTCACGTTTAGAGTCCGGTGCAGACCTTCAGGATACCATGATGATGGGTGCTGACTACTATCAAACTGATT CTGAAGTTAAATCTCTACTAGCAGAAGGAAAGGTTCCAGTTGGTGTTGGAGAGAATACCAAAATCAGGAACTGTATAATT GACAAGAATGCCAAGATAGGAAGAAATGTTGTTATTGTAAACAGTGATGGTGTTCAAGAAGCTGACAAGCCTACAGAAGG ATTTTACATTAGGTCTGGCATAGTAGTTATAGTGAAGAATGCAACAATTAAAGATGGAACCACCATCTGA
Protein sequence (LotjaGi5g1v0013300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFISNCDPLVNAAMDSAFATLNANLVITNKVSSFWGENTRGNFNTRFCSIPSCQSSKSRKSKPGLVYAVYTPDINKESLT FQGPIIQSPKANPDNVAAIILGGGAGKRLFPLTSTRAKPAVPIGGCYRLIDIPMSNCINSGIRKVYVLTQYNSFSLNGHL SRTYNFGNGVNFGDGFVEVLAATQTPGEAGKKWFQGTADAVRQFIWVFEDAKNKNIEHIMIISGDHLCRMDYMKLLEKHI WTNSDITVSCVPMDESHASDYDLLRIDRKGQIIQFAEKPKGSDLKAMHVDTTLLGLPAEEARKHPYIASMGVYAFRTETL LKLLRWSCPSCNDFGSELIPSALRDHKVQAYLFRDYWKDIGTIKSFFDANLDLTGQNPKFELYDSKTPFFTSPRFLPPTK VVKSKIVDAIISHGCFLSECSVQRSIVGVRSRLESGADLQDTMMMGADYYQTDSEVKSLLAEGKVPVGVGENTKIRNCII DKNAKIGRNVVIVNSDGVQEADKPTEGFYIRSGIVVIVKNATIKDGTTI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 529 | 505 | 6.2E-268 | – | |
| PANTHER | 25 | 529 | 505 | 6.2E-268 | – | |
| Gene3D | 82 | 394 | 313 | 1.1E-93 | ||
| SUPERFAMILY | 95 | 491 | 397 | 3.05E-77 | ||
| TIGRFAM | 96 | 493 | 398 | 1.6E-135 | ||
| Pfam | 98 | 374 | 277 | 1.3E-71 | ||
| CDD | 98 | 360 | 263 | 4.30157E-79 | – | |
| ProSitePatterns | 102 | 121 | 20 | - | ||
| ProSitePatterns | 193 | 201 | 9 | - | ||
| SUPERFAMILY | 391 | 529 | 139 | 1.62E-26 | ||
| Gene3D | 395 | 529 | 135 | 6.7E-48 | – | |
| CDD | 397 | 523 | 127 | 8.78941E-31 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Glycogen biosynthetic process | The chemical reactions and pathways resulting in the formation of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues. | ||
| Molecular function | Glucose-1-phosphate adenylyltransferase activity | Catalysis of the reaction: alpha-D-glucose 1-phosphate + ATP = ADP-glucose + diphosphate. | ||
| Biological process | Biosynthetic process | The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones. | ||
| Molecular function | Nucleotidyltransferase activity | Catalysis of the transfer of a nucleotidyl group to a reactant. |
Expression pattern of LotjaGi5g1v0013300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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