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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR011006
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 158 results. Now displaying 4 of 4 with 50 rows per page. This search has taken 5.920s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi6g1v0099200.1
n.a. Two-component response regulator; TAIR: AT1G67710.1 response regulator 11; Swiss-Prot: sp|Q5N6V8|ORR26_ORYSJ Two-component response regulator ORR26; TrEMBL-Plants: tr|A0A0B2QVM4|A0A0B2QVM4_GLYSO Two-component response regulator ARR11; Found in the gene: LotjaGi6g1v0099200 LjG1.1_chr6 21411064 21415848 +
2 domain predictions
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LotjaGi6g1v0134700_LC.1
n.a. Two-component response regulator; TAIR: AT1G67710.1 response regulator 11; Swiss-Prot: sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11; TrEMBL-Plants: tr|K7MPB5|K7MPB5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0134700_LC LjG1.1_chr6 38903211 38911457 -
2 domain predictions
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LotjaGi6g1v0134700_LC.2
n.a. Two-component response regulator; TAIR: AT1G67710.2 response regulator 11; Swiss-Prot: sp|Q5N6V8|ORR26_ORYSJ Two-component response regulator ORR26; TrEMBL-Plants: tr|A0A0B2QVM4|A0A0B2QVM4_GLYSO Two-component response regulator ARR11; Found in the gene: LotjaGi6g1v0134700_LC LjG1.1_chr6 38903211 38911457 -
2 domain predictions
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LotjaGi6g1v0134700_LC.3
n.a. Two-component response regulator; TAIR: AT1G67710.2 response regulator 11; Swiss-Prot: sp|Q5N6V8|ORR26_ORYSJ Two-component response regulator ORR26; TrEMBL-Plants: tr|A0A0B2QVM4|A0A0B2QVM4_GLYSO Two-component response regulator ARR11; Found in the gene: LotjaGi6g1v0134700_LC LjG1.1_chr6 38904149 38911414 -
2 domain predictions
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LotjaGi6g1v0205900.1
n.a. Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|Q6K8X6|ORR23_ORYSJ Two-component response regulator ORR23; TrEMBL-Plants: tr|A0A0B2Q5E5|A0A0B2Q5E5_GLYSO Two-component response regulator ARR12; Found in the gene: LotjaGi6g1v0205900 LjG1.1_chr6 50301643 50306997 -
2 domain predictions
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LotjaGi6g1v0205900.2
n.a. Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|Q6K8X6|ORR23_ORYSJ Two-component response regulator ORR23; TrEMBL-Plants: tr|I1L2E2|I1L2E2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0205900 LjG1.1_chr6 50302079 50306813 -
2 domain predictions
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LotjaGi6g1v0255200.1
n.a. Two-component response regulator; TAIR: AT4G16110.1 response regulator 2; Swiss-Prot: sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2; TrEMBL-Plants: tr|I1MGI9|I1MGI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0255200 LjG1.1_chr6 56796785 56802796 +
2 domain predictions
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LotjaGi6g1v0255200.2
n.a. Two-component response regulator; TAIR: AT4G16110.1 response regulator 2; Swiss-Prot: sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2; TrEMBL-Plants: tr|I1MGI9|I1MGI9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0255200 LjG1.1_chr6 56796854 56802794 +
2 domain predictions
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