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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0205900 |
| Transcript ID | LotjaGi6g1v0205900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT2G25180.1 response regulator 12; Swiss-Prot: sp|Q6K8X6|ORR23_ORYSJ Two-component response regulator ORR23; TrEMBL-Plants: tr|I1L2E2|I1L2E2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0205900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:50302079..50306813) extracted from Lotus japonicus Gifu genome v1.2.
AGCAGAGAGCACGAGAGAGAGAGAGAGAGAGAGAGACAGAGAGAGAGAGAACAACAACACTTTCACTAAATTACTAAAAT ACTCAAAAAGATTTCTGTTTTGTTTTGTTGGCTTCTTCAAATCCATCACTGTCCATTTTTTCTGCAGGTTTTGTTGTTAC CCTTCTTCTTCTCCATTTCAACATTTCTCTCTCTTCAGAGTGTTCCCTTTACCCTCTTTCTCTCTTGCTTGCTTACCCTT TTGCTGTTGGTGAAAGAGAGGCCTTGAGGGCAACGTTTTGGGCTTCAAAATTGAAGCTTTTTGCTATTGGAGCCTTGATC TCTGTGAAAGTAGTTCTTTTTCTCATCTGGGTATCTCTGAAAGCTTGATATGGCTGTGGAGAATCAAAGGGGTCATTTGG TGGATGAAGATGCGGGCCGTGACAGGTTTCCTGTGGGTATGAGAGTTTTGGCTGTGGATGACGACCCTACTTGTCTCAGA GTGTTGGAGAATCTGCTCCGCAAATGCCAGTATCATGGTAAATAGCTTTTTGTGTTTTGGTTCTGTGAAAATTCAGTAAT TGTGATGAAATTACAACATATTCTGGTAGTATTGAGATGTAAAAATCTGTTCTTTTGTTGAATTGAGCCTTGAATTTGTT GTTACTTTAAGGTTTTAGATGCATTGTGGATGTATGCTGTGTTTATTGTCATTTATGCATAAACATCAGTTGACCAGGCC TAATTCTGATTCCAATTTCAAAATTTGTGATTTTGCAAGATGGGAAAATTCTTACCCTATCCAAAGTTGAAAACTTTAGT TCAATATTGAATTTTTTTTATGATTAGGGAAAACAGAAATAAGTTGGTAATAATTTTTTTTGTTTGTGGTGGTTGTTGCA GTTACAATAACTAATCAGGCGGTTGAGGCGCTGAAAATGTTGAGGGAAAACAGAAATAAGTTTGACCTAGTTATCAGTGA TGTGAATATGCCTGACATGGATGGATTTAAGCTCCTTGAGTTGGTGGGACTTGAAATGGACTTGCCAGTTATCAGTAAGT GCATTTAACCTTAGCTTTACTTCTCCATTTTCTGAGGTTGTTCTTTTACTGTTAAAAAGATTCTTCTAATCACAGTTCAA TTTGTTCGAATTATTTTCCTCTTGTTCTTCTCAAAAGTAAGGAGTTAATTTACCCTCACAAGAGTTAATTATTTTGGTAG GAAGTATGGTCTTAAGAATGATAATATGTCTCACAATAATGGGTTGAATAGGTTCATTGACTTGGACTGTTGTTCTTTTT TATCTTGTTCTAGTGTTGTCAGCACACAGTGACACAAAGCTGGTGATGAAGGGTGTTAGACATGGTGCGGTTGACTATTT GTTGAAACCTGTTCGAATTGAAGAGCTCAAGAACATATGGCAACATGTTGTTCGAAGAAAAAATTCTGATGGAAAGGATC AGAATAAGGCTTCCAATGAGGAAAGGGGTCCTAATGTGTCTGGGGGAGGCAGCCAAGGCATCATATCGGAAAACAGTGCT GACCAGAATAGAAAGCTTGGAAAAAAACGGAAGGACCAAAATGAGGAAGAAGATGAAGACGGTGATGGGAATGGAGAGGA TGATGATCCATCATCACAGAAGAAACCTCGTGTGGTTTGGTCTGTTGAGCTGCATAAAAAATTTGTTGCCGCTGTTAATC AACTCGGCCTAGATAGTGAGTTTTTGACAATGCAGATATACCTTACGAAATTTGTTTGATGTCATTTCATAAAAACTTCT TGTCTCAATATGGGTCCTATAATTCCTAATACCTGGTTTATTCTCCTGCGTTGCAGAAGCTGTTCCTAAGAAAATACTTG ACATGATGAATGTTGAAGGGCTTACAAGGGAAAATGTGGCTAGCCATCTGCAGGTAAATATAAGCCTACCTTTGTAGTTA TCTTAACGGTTTTATTTAGCCTTTGACAAATCATGGAATGAATATTTTTTAGATAAGATGACTCATTAAATTTTGTTCAG TGGAAACATAATGAAGCGAAAGCATGTACAATGAATTAACAACTTTGGGAAATTGTGTAGCAATATCAGTATCAATAGTC AAAGTGTTAAGTTAAGAACTTCGCGTTCTCTTGAAAAGTGTGCCTAGTATAATATTATATTCATTTTAGTAAAACATGAT AGATCAAATTCACAGAATTGCTTGAAACACATGTTTTCAAGTCCCACCTAATAAAAGGTTGATTTCTGGAACAGCTTTGA GTTTCTGACTATTATTTGTCTAATCAAGCAGAGATGTACTACTTTGAACATGCACTAGTTTGTTTAATTGCATGTGTGCT ACTTAAATAGCTCTTTATTAGCTCACAGTTCAGCTTATTGCATATTAAGCTCAATGTCCTTATGTGTTGCAGAAATATAG ACTCTATCTGAAAAAGGCAACCCAACAAGTTAACATGGTTGCTGCATTTGGTGGTGGTGATGCTTACCTGCGTATGGGTG CTATAGATGGCTTTGGAGATTTCTGCACCTCGTCTGCATCTGGAAGGATCTCAAGCGCCACATTGCCATCATATGCGTCA AATGGAATTTTTGGTAGGCTGAATTCCCCAGCTAGCTTGAGCTTGAGAGGAATTAGTTCTCCTTCACTAATTCGGCCAGT TCCGTCTCAAAACATCAATAATTCCTTAAACACACTTGCAACCATTCAGCCATCCATATTTCCTGCAAATCAAAGCCCAA GCTTACTGCAGGGCATTCCAACATCAATTGAGCTGAACCAATCTAAGCAAAATGGCTGTCCAACTGGCATATCGCAGTTA AGTCAAGTTGATTCAAGTAGATTTGCAGTTGCTGCCTCTGGCTTCTCAGACAGTAGGGCTACTGTTAGTAATTCAAACAG TTCTCTACCCGGTGTCTCAAATAATCATTTAATGTTACATGGAAATCCACACCAAACGCATAATGCAGGAGCTTTTAGAA ATCAGTCTTCTGTTAGAGCGCCTTCTTTGAGCACAGACTCTTTTGACATTGGCATTGGTGGTTCATCTAATTTATTGGAT TATAATCGGTGTAATGAAAATTGGCAGAACGCATCTCAGCTGTCTAAATTCCCTGCCAATTCTTTACCACTGTGTGAGGC TTTCAATAATGATCAACTGCCTCCAACTAGCATAAATGTTTCTAACTCGAGTACTCATATTGGTAACAGTCAGGTGGGTT TTTCTTCTGGAATCGCAATTGCTGCTCCTATGGGTGATGCTAGAAATGATCTGCGATGCCAAGAAGGCTTAATTGGGAAT GTCATACAGCCTTCAAGTTACACAGCACGAGAAAGGTGGGAAGATTACAACCAAAACACAAGTCGTCCCTTCAATCCTGT GAATTCACAGGTTTCTCCCCATGGAGTGACGGGTTCTTTACGGAATAGCTTAAGCCAAAATAAAGCAATGTGCAGCAATA GTGCATCTTTGGCTGGCCATCTAAATGGTGCTTCCACATCAATTGCTCGGTGCACTGAAGTTGAGAATTTCTCTTCGGAC ATGCGATTGAAGTCAAATGAGGCCTACATGTTGGAGCAGATGAAGTCCCATGATGGGTTTATGCAAAATTTTGGGACCTT GGATGACATCATGGGTGCAATGGTCAAAAGGGTATGACTTCTGTCGTTCCATTCTTAAGAAGAAACTATAAGGTTTCTTC CTCTTCCCTTTTTGCCCCTTAAAATGCTTTTCTGATTGCAACGGTATCATGATACAAGTAAACACTTTTTGAGTTTTGTT TGTTGCTTTTGGATGTCTGTGTATGTGGTTCTGTTCCTCTGGTTTGTCACTATTGTTTTAAACTTCATAACCTAATTTTA TTATTAAAAATTAACCTTATAGAAATAATGCAAAAAAAGTATCATATATTTTGATGTCCATCAAGTTTTGATGAGATGAG CATTAGTGTATGAAAGATGAAACTTATTGCCAAGTTTCTTTTTTATTTGATGTTGATATTTCTCAGTTTCGTTTTAATTT GGTGGTGCTTTTCATTTGCAATGGAATATATGAAGGTGATGACACTTTGTTCAATCAAATTTCACCATCACACTAGCTGC ATATGCCTTTCCTGTCTTTTTATTTTCACTTGTTTCATTGTTTGGAAGGTTATACAACTGAATTGTGTTCAAAATTTACT AAACTGATTAAGATGAACATGCAAACTGAGAATTCTGATTTCATTGTTTAAGATTAATGTAAATATATGATGATGCAATA TAGTTTCTAAACGATGAATTTGATGCTTCACTAATTATCAGACTCAAACTGATTTATTGAGTTTATGGGAGACTGGTGTA GTTTTCTAGTAATTTATATTATAGTGATATGTGTCTATTTTTGTTTCATCATTTCATGAAGGACTTTGTAATGCAGGAAC AAAATGAGTTGACTTTGATGGATGGAGAAATGGGATTTGATGCTTACCCTGTTGGATCATGCATCTGATTTCTTCTTATT CAGCATGCAACAAGGAGCATCAAAATTGTGAAACTTACTCCTTTCACTGGAGCCTAGTTCATTATAGTTTCTCTTTGATG TACTTTTTTTTTAATGTTCTGCTACCAAACTTCTCATTTGCTAACTTTTTTTCTTTTACTTTTGGACATATATGTTAGCT ATCTGATCCGGTTCAACGTCAAAAATTTCTGACAGTTTTCTTTTCTGATAAATAATGTGTTATGAATGTATTTATTAGTT CTTGTTTCTTTCTTA
CDS sequence (LotjaGi6g1v0205900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTGGAGAATCAAAGGGGTCATTTGGTGGATGAAGATGCGGGCCGTGACAGGTTTCCTGTGGGTATGAGAGTTTT GGCTGTGGATGACGACCCTACTTGTCTCAGAGTGTTGGAGAATCTGCTCCGCAAATGCCAGTATCATGTTACAATAACTA ATCAGGCGGTTGAGGCGCTGAAAATGTTGAGGGAAAACAGAAATAAGTTTGACCTAGTTATCAGTGATGTGAATATGCCT GACATGGATGGATTTAAGCTCCTTGAGTTGGTGGGACTTGAAATGGACTTGCCAGTTATCATGTTGTCAGCACACAGTGA CACAAAGCTGGTGATGAAGGGTGTTAGACATGGTGCGGTTGACTATTTGTTGAAACCTGTTCGAATTGAAGAGCTCAAGA ACATATGGCAACATGTTGTTCGAAGAAAAAATTCTGATGGAAAGGATCAGAATAAGGCTTCCAATGAGGAAAGGGGTCCT AATGTGTCTGGGGGAGGCAGCCAAGGCATCATATCGGAAAACAGTGCTGACCAGAATAGAAAGCTTGGAAAAAAACGGAA GGACCAAAATGAGGAAGAAGATGAAGACGGTGATGGGAATGGAGAGGATGATGATCCATCATCACAGAAGAAACCTCGTG TGGTTTGGTCTGTTGAGCTGCATAAAAAATTTGTTGCCGCTGTTAATCAACTCGGCCTAGATAAAGCTGTTCCTAAGAAA ATACTTGACATGATGAATGTTGAAGGGCTTACAAGGGAAAATGTGGCTAGCCATCTGCAGAAATATAGACTCTATCTGAA AAAGGCAACCCAACAAGTTAACATGGTTGCTGCATTTGGTGGTGGTGATGCTTACCTGCGTATGGGTGCTATAGATGGCT TTGGAGATTTCTGCACCTCGTCTGCATCTGGAAGGATCTCAAGCGCCACATTGCCATCATATGCGTCAAATGGAATTTTT GGTAGGCTGAATTCCCCAGCTAGCTTGAGCTTGAGAGGAATTAGTTCTCCTTCACTAATTCGGCCAGTTCCGTCTCAAAA CATCAATAATTCCTTAAACACACTTGCAACCATTCAGCCATCCATATTTCCTGCAAATCAAAGCCCAAGCTTACTGCAGG GCATTCCAACATCAATTGAGCTGAACCAATCTAAGCAAAATGGCTGTCCAACTGGCATATCGCAGTTAAGTCAAGTTGAT TCAAGTAGATTTGCAGTTGCTGCCTCTGGCTTCTCAGACAGTAGGGCTACTGTTAGTAATTCAAACAGTTCTCTACCCGG TGTCTCAAATAATCATTTAATGTTACATGGAAATCCACACCAAACGCATAATGCAGGAGCTTTTAGAAATCAGTCTTCTG TTAGAGCGCCTTCTTTGAGCACAGACTCTTTTGACATTGGCATTGGTGGTTCATCTAATTTATTGGATTATAATCGGTGT AATGAAAATTGGCAGAACGCATCTCAGCTGTCTAAATTCCCTGCCAATTCTTTACCACTGTGTGAGGCTTTCAATAATGA TCAACTGCCTCCAACTAGCATAAATGTTTCTAACTCGAGTACTCATATTGGTAACAGTCAGGTGGGTTTTTCTTCTGGAA TCGCAATTGCTGCTCCTATGGGTGATGCTAGAAATGATCTGCGATGCCAAGAAGGCTTAATTGGGAATGTCATACAGCCT TCAAGTTACACAGCACGAGAAAGGTGGGAAGATTACAACCAAAACACAAGTCGTCCCTTCAATCCTGTGAATTCACAGGT TTCTCCCCATGGAGTGACGGGTTCTTTACGGAATAGCTTAAGCCAAAATAAAGCAATGTGCAGCAATAGTGCATCTTTGG CTGGCCATCTAAATGGTGCTTCCACATCAATTGCTCGGTGCACTGAAGTTGAGAATTTCTCTTCGGACATGCGATTGAAG TCAAATGAGGCCTACATGTTGGAGCAGATGAAGTCCCATGATGGGTTTATGCAAAATTTTGGGACCTTGGATGACATCAT GGGTGCAATGGTCAAAAGGGTATGA
Protein sequence (LotjaGi6g1v0205900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVENQRGHLVDEDAGRDRFPVGMRVLAVDDDPTCLRVLENLLRKCQYHVTITNQAVEALKMLRENRNKFDLVISDVNMP DMDGFKLLELVGLEMDLPVIMLSAHSDTKLVMKGVRHGAVDYLLKPVRIEELKNIWQHVVRRKNSDGKDQNKASNEERGP NVSGGGSQGIISENSADQNRKLGKKRKDQNEEEDEDGDGNGEDDDPSSQKKPRVVWSVELHKKFVAAVNQLGLDKAVPKK ILDMMNVEGLTRENVASHLQKYRLYLKKATQQVNMVAAFGGGDAYLRMGAIDGFGDFCTSSASGRISSATLPSYASNGIF GRLNSPASLSLRGISSPSLIRPVPSQNINNSLNTLATIQPSIFPANQSPSLLQGIPTSIELNQSKQNGCPTGISQLSQVD SSRFAVAASGFSDSRATVSNSNSSLPGVSNNHLMLHGNPHQTHNAGAFRNQSSVRAPSLSTDSFDIGIGGSSNLLDYNRC NENWQNASQLSKFPANSLPLCEAFNNDQLPPTSINVSNSSTHIGNSQVGFSSGIAIAAPMGDARNDLRCQEGLIGNVIQP SSYTARERWEDYNQNTSRPFNPVNSQVSPHGVTGSLRNSLSQNKAMCSNSASLAGHLNGASTSIARCTEVENFSSDMRLK SNEAYMLEQMKSHDGFMQNFGTLDDIMGAMVKRV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 645 | 645 | 5.2E-272 | – | |
| PANTHER | 1 | 645 | 645 | 5.2E-272 | – | |
| Gene3D | 21 | 158 | 138 | 4.2E-36 | – | |
| SUPERFAMILY | 23 | 144 | 122 | 3.98E-37 | ||
| SMART | 24 | 136 | 113 | 6.5E-35 | ||
| ProSiteProfiles | 25 | 140 | 116 | 44.632 | ||
| Pfam | 26 | 134 | 109 | 1.0E-25 | ||
| CDD | 27 | 139 | 113 | 6.50058E-31 | ||
| MobiDBLite | 143 | 212 | 70 | - | – | |
| MobiDBLite | 156 | 177 | 22 | - | – | |
| MobiDBLite | 178 | 192 | 15 | - | – | |
| Gene3D | 207 | 270 | 64 | 9.1E-33 | – | |
| ProSiteProfiles | 208 | 267 | 60 | 11.409 | ||
| SUPERFAMILY | 209 | 268 | 60 | 6.81E-20 | ||
| TIGRFAM | 211 | 264 | 54 | 1.9E-24 | ||
| Pfam | 213 | 263 | 51 | 5.0E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). |
Expression pattern of LotjaGi6g1v0205900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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