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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0099200 |
| Transcript ID | LotjaGi6g1v0099200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Two-component response regulator; TAIR: AT1G67710.1 response regulator 11; Swiss-Prot: sp|Q5N6V8|ORR26_ORYSJ Two-component response regulator ORR26; TrEMBL-Plants: tr|A0A0B2QVM4|A0A0B2QVM4_GLYSO Two-component response regulator ARR11; Found in the gene: LotjaGi6g1v0099200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:21411064..21415848) extracted from Lotus japonicus Gifu genome v1.2.
GTCATATTGTGTCTGTTGAATGTGTGCAGAAGTTGGAGGTAGGACCAAACTCTCAAACAGATATACTAACATGCGCCACA AGGCCGTTAGCTATCCGGCGCCAATATTCCTTGGTGCTCTCTCTCTTTTTCTCTGTCTCTATATGTTTGTGCTTTTGTCA CTTTCCTTAAATTTTTTTCACTCACCTCATAACCTATCAAACAAACCAAACCTTTATTTTTGAACTCAAAACAGAACCAG CAGTGATCCTTAGGCATCTCTGTTTCTCACAAACATGGAAAACGGTTGCTTCCCTTCTCCTCCTCGACGTGATTTTCCTG CTGGTCTGCGAGTCCTTGTTGTCGATGATGATCCAACATGGCTCAAGATCCTTGAAAAGATGCTCAAAAAGTGCAACTAT GATGGTTGGTTTTTTAGTTTAGTTTTTTTTGTTTTTGTTTTGTTTTGGGTTTATTTTAGTCATGACTCATGAGTAGTTCC TTTCTCTTTCCGCACACACATACCACTTTTGTTGTTTGCTAAATAACCAGTATTAATTTGATCTTCAAAGTTGATATTAA ATTTTCTTGTACACTATTCCTCTGCCATCTACCATCATGCGTTCCCATGTTTTGGTTGAGGTAATTAAAGTATGTGGGGG GATTGTGGTCATATTGTTATGGTCCAGTATTAAAGGAATGTGTCTTTATTTTATTCTTGCCAAAAAAAGAGGAACAGAAT TCCTTTTTATTAGCATGTGAAAATTGATGAAGTTGAAGTAGTTAGCTGATGTTAAAATCATGCATTTTTGCAGCAATTTT CATTTTAAAGTATTTCTGGGTTACTTTTATCTGTAACCTGGCAAATCAGTGTTGCAATTTTTTAAAATAGGGTCCCTTTC AATTTTCACAAGAGTCAAAAGCTTGAATTGCTGAGAACCTTCAGATTGCAAAAGTGATTAGATGGAGCAGGATTATAAGC AATCTGTGTTTAAAATCAAAATAGGGGCATAAAGAAGTTCCCATGTCTAATTCGACTTAATCTGATTTGACACTGCTTGG TATCTTTGGGAATTATATGCTATGTAGGTAATCCGTAATCCCACTCCCACATCCATGGGTAAGGTGTACTAGAACTAAGG TGAGAGGATAGTTGGTGCACTAGGAATGGCATCTCAGATTAGTTCTTACAACAATATAACAAATAACTGAAGAGTGCTTT TGGAAGAGGTTTTTGGAGCTTATTTGTGATCTTTAAGCACATATTTGGTTAAACGTGTAGAATAGCTTATGATCCACTTA TAATCTCTTTAAGCTTATTTGAATAAGTTCCTTAGATATACTTATGATGAATAAGCCCTTATTGAATAACCTCTTTCAAT AAGTTATCATGTCATAAACTGCTAAAAGTACCCTCAATCTGATTCAAGGCTCTATTATTATTGTTTGTGGTATCTTTGAA TCTAATATGCCGTGTTGGTAATCCCACTCTCACAACCATTAGTAACGCGGATAAGGATTAATGTTAGGGGATAATAGATG CACCAGCAGCGGCATCTAAGATTAGTTCTTACAAAACTATACTAAGTAACTGAATTAATCTGAATACAGGAAACTGCACA TCATTTGTCTGTTTTTGAAATGCGAGGCAAAAGTGCAAAATTAAAAATTTACCTAGACATCTAGATTCAGCATTTTTTTC TCAGTAAACTAAACAACAACCAAGCCTTTTCTTGTTAAGCGCTGTCCTTGGTAGTTTGTAAGAACTTACTGTCACTAATG AAGGGTAGAGAATTTAGTGCTATAAGACAAATATAAACAATACTTGAAAGATATTCCAATTAATGATTTCATGACTGCTA TGAGAATGGACAGTCTTAGTGTTTGATATGAATGGCACTGATAGCAGTAAGAGGTTATGTAAGGTACTTAGGTTGGTCTT TTAAAAAAACTTTAGATGAACAAATTTACACATCTGTAATAATAAAGCAGAAACGGTTTTTTTGATCTGTCAACATCTTT ATTGGCTTCCAGTCCCTTTATGCTATTTATTCTATCTATGTAAGTGAGATTTCATAGAATTAGCAAATTTTGGAAAGCAA GCACGTCATATGTCTTCCTTATAAATTCTGTTATGATGCCTGATTTCTTTCGTCATTCTGACTGTCTTCTTTCTCTTACT TGCTTCAGTGACTACCTGTTGTTTAGCAAGACATGCTCTAAGCTTGCTTCGTGAAAGGAAGGACGGATATGACATAGTTA TCAGTGATGTAAACATGCCTGACATGGATGGTTTCAAACTTCTTGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATT AGTAAGTTTTCTCCCAAGAATTCATGTTTTTGTTGAATGATATCACTGAAATCCTATGAACACATTGATTTGAAGTCCAT GCACTGACAAGTCATTTCCTTTACAATGTTGTTCAGTGATGTCTGTGGATGGAGAAACAAGCAGGGTGATGAAAGGCGTT CAACATGGTGCATGTGATTATCTCCTCAAGCCTATACGGATGAAAGAACTGCGAAACATATGGCAACATGTCCTTAGAAA AAGGATACACGAGGCTAGAGAGTTTGAAAGTTTTGAGAGTTTTGAGGGCAATTACTTGATGAGGAATGGATCAGAGCTGT CTGATGATGGAAACCTGTTTGCACTAGAAGATATGACTTCATCGAAGAAAAGAAAAGATGCAGATAACAAGCATGACGAC AAAGAATTTGTGGATCCATCTTCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTTGATCTTCATCAGAAGTTTGTTAGAGC AGTGAATCAGATTGGATTTGATAGTAAGTTTATTATCTCTAAAATGGTATTTGGATGCACCATTAAGATTCTATAAATCT TGATGTTAAGCCTAACCAAACTTCCTCAATGAATTAGTGTGACTGCAAAGCATATATAGTAGTTTTGATATAGTCATCAA CTCATCATCATATCTATCATGCATAAAATTTTTAGTAACAAATAATTTTTGTTTGTCAGAAGTTGGTCCAAAGAAAATAC TAGATTTGATGAATGTTCCATGGCTGACTAGAGAGAATGTTGCTAGCCACTTGCAGGTGATGCTATATTTTCACTCCTTG AATATCCTTAGACTATTGGAAAATAAAGAAGCATAATATCTTTCATTAAGATTTGCATCTGGATATTTTAATATTTCTTA TTACATGTGTGATTCTAACTCATGTATATTCTATTTCGGGTGGACATAGAATCGCAACGGAGCTTCACTGTAATACAATA GGGAGTAATTAGTTAAACCACCAACCAACGGTCCTGTAAAAATGTTTCTCTGAAATATTACAACCTAGACACAAATCCTC TTGTAAATTCATTAAAACAAAACAATAAGAATGAAAAACATAATGGTATGTTCCATAAGTTTGAAGTTTGAAACTCAGAT TCCTTATGGGAAATTTTTTGTTGTGCAGAAATACCGGCTTTACTTGAGCAGGCTTCAGAAAGATGACGAACAAAAATCTT CCTCAAGTGGAATGAAGATTTCCGATTTACCTACAAAAGAAGTAGGAAGTTTCGGTCTTCATAACTCTGTAACAAAGCAG CAAAATGATGTTTCAATTGATAGCTGCAATTATCCAGATGGAGCATTACAGATTCAGAAAGTGGAAACCAAAAGTCAAGA AGGTAACACCAAGGGAATTGTTTCGCAGTCCACCATGGAAGAAAAGGGAAGAGCTTTGACTGGTAATAATAACATTACTG ATGTAATGAGAGAGGGTTTACAGGTGGGCCTTAACCAACCTTTTGCCCTTCCTGAGTCAAAAGGAAACTGTACATCGTTT GATTGTGCCATCCCAACTAAGTACTCTTGGACTGAAGTTCCAGGAATGCAACTCAAAGAAGAACAGAAGTCAATTGTTCA GTTAGAGGATAGCTTCAACCAATTGCCGCCATTACTTGGAAAGCAGCATCATATCCAAGTTGATCAATCACAATCAATTG CTTCCATTAGTTCCACTCCCTCTATAATGAAGGAAGATGTTCCTGCTTGTATAGAAACAAAACCTGTGTTTTCTGATTAC AAGAGCAGTTACACAAGTTCTATAAGTTCCAAAGTGAGTGCACTTGACACCTTTCCGATTCAGCCCGGAAGCCTTATGAT GAGTGATCAACCTTTACAACCCACATCCGCTGCAAATTTAGGCTTGAAAACACAGGGATCTAATCTCAGTTCCATTTCTG ATTTGGAGTTTTACCAAAGAAACCTACTGTTGGGAGGTGATGCACCTTCTGCTTCTTTGGATGAGGACTTATATTCTTAC TGGATACAAGGTGAATGTTATAATATGAACTTCGGTCTGCAGAGTGTAGCGATGCCTGAGTTTTATGATCCAGGGCTTAT TGCAGAAGTTCCACCCCACTTATATGATTCAACTGATTATACAGTTATAGATCAAGGTCTATTCATAGCATGATCTCTCT GCTCTTTGTTTCAACTTGAACAAAAATCAAAATTCATGTAAGAGTGGGCAATGTAATGTTACTTGTAGCTAATTATATCT AGCAGTGAAGAATTTCAAATTCAAGTGTTGGGAATTCTTTTTCCAATCATCAAGGATTTGGAAATTGCAGCTTGTATAGA AGTGGAGAATCACAAATATTAAGCTTAATTAATAAGCTTGCTTCCTTCTTATTTTATTTTATTCCAGTACTTGCTTTATA AATATGCATTGTAACTTTGGGTTAACCAAAGTTAAAAAGGACTCGATCTTTCTCAAATGACAACT
CDS sequence (LotjaGi6g1v0099200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAACGGTTGCTTCCCTTCTCCTCCTCGACGTGATTTTCCTGCTGGTCTGCGAGTCCTTGTTGTCGATGATGATCC AACATGGCTCAAGATCCTTGAAAAGATGCTCAAAAAGTGCAACTATGATGTGACTACCTGTTGTTTAGCAAGACATGCTC TAAGCTTGCTTCGTGAAAGGAAGGACGGATATGACATAGTTATCAGTGATGTAAACATGCCTGACATGGATGGTTTCAAA CTTCTTGAGCATGTTGGACTTGAGATGGATCTTCCTGTCATTATGATGTCTGTGGATGGAGAAACAAGCAGGGTGATGAA AGGCGTTCAACATGGTGCATGTGATTATCTCCTCAAGCCTATACGGATGAAAGAACTGCGAAACATATGGCAACATGTCC TTAGAAAAAGGATACACGAGGCTAGAGAGTTTGAAAGTTTTGAGAGTTTTGAGGGCAATTACTTGATGAGGAATGGATCA GAGCTGTCTGATGATGGAAACCTGTTTGCACTAGAAGATATGACTTCATCGAAGAAAAGAAAAGATGCAGATAACAAGCA TGACGACAAAGAATTTGTGGATCCATCTTCCACAAAGAAAGCTAGAGTAGTTTGGTCTGTTGATCTTCATCAGAAGTTTG TTAGAGCAGTGAATCAGATTGGATTTGATAAAGTTGGTCCAAAGAAAATACTAGATTTGATGAATGTTCCATGGCTGACT AGAGAGAATGTTGCTAGCCACTTGCAGAAATACCGGCTTTACTTGAGCAGGCTTCAGAAAGATGACGAACAAAAATCTTC CTCAAGTGGAATGAAGATTTCCGATTTACCTACAAAAGAAGTAGGAAGTTTCGGTCTTCATAACTCTGTAACAAAGCAGC AAAATGATGTTTCAATTGATAGCTGCAATTATCCAGATGGAGCATTACAGATTCAGAAAGTGGAAACCAAAAGTCAAGAA GGTAACACCAAGGGAATTGTTTCGCAGTCCACCATGGAAGAAAAGGGAAGAGCTTTGACTGGTAATAATAACATTACTGA TGTAATGAGAGAGGGTTTACAGGTGGGCCTTAACCAACCTTTTGCCCTTCCTGAGTCAAAAGGAAACTGTACATCGTTTG ATTGTGCCATCCCAACTAAGTACTCTTGGACTGAAGTTCCAGGAATGCAACTCAAAGAAGAACAGAAGTCAATTGTTCAG TTAGAGGATAGCTTCAACCAATTGCCGCCATTACTTGGAAAGCAGCATCATATCCAAGTTGATCAATCACAATCAATTGC TTCCATTAGTTCCACTCCCTCTATAATGAAGGAAGATGTTCCTGCTTGTATAGAAACAAAACCTGTGTTTTCTGATTACA AGAGCAGTTACACAAGTTCTATAAGTTCCAAAGTGAGTGCACTTGACACCTTTCCGATTCAGCCCGGAAGCCTTATGATG AGTGATCAACCTTTACAACCCACATCCGCTGCAAATTTAGGCTTGAAAACACAGGGATCTAATCTCAGTTCCATTTCTGA TTTGGAGTTTTACCAAAGAAACCTACTGTTGGGAGGTGATGCACCTTCTGCTTCTTTGGATGAGGACTTATATTCTTACT GGATACAAGGTGAATGTTATAATATGAACTTCGGTCTGCAGAGTGTAGCGATGCCTGAGTTTTATGATCCAGGGCTTATT GCAGAAGTTCCACCCCACTTATATGATTCAACTGATTATACAGTTATAGATCAAGGTCTATTCATAGCATGA
Protein sequence (LotjaGi6g1v0099200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENGCFPSPPRRDFPAGLRVLVVDDDPTWLKILEKMLKKCNYDVTTCCLARHALSLLRERKDGYDIVISDVNMPDMDGFK LLEHVGLEMDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELRNIWQHVLRKRIHEAREFESFESFEGNYLMRNGS ELSDDGNLFALEDMTSSKKRKDADNKHDDKEFVDPSSTKKARVVWSVDLHQKFVRAVNQIGFDKVGPKKILDLMNVPWLT RENVASHLQKYRLYLSRLQKDDEQKSSSSGMKISDLPTKEVGSFGLHNSVTKQQNDVSIDSCNYPDGALQIQKVETKSQE GNTKGIVSQSTMEEKGRALTGNNNITDVMREGLQVGLNQPFALPESKGNCTSFDCAIPTKYSWTEVPGMQLKEEQKSIVQ LEDSFNQLPPLLGKQHHIQVDQSQSIASISSTPSIMKEDVPACIETKPVFSDYKSSYTSSISSKVSALDTFPIQPGSLMM SDQPLQPTSAANLGLKTQGSNLSSISDLEFYQRNLLLGGDAPSASLDEDLYSYWIQGECYNMNFGLQSVAMPEFYDPGLI AEVPPHLYDSTDYTVIDQGLFIA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 571 | 571 | 1.9E-282 | – | |
| PANTHER | 1 | 571 | 571 | 1.9E-282 | – | |
| PIRSF | 2 | 556 | 555 | 2.9E-146 | ||
| Gene3D | 14 | 148 | 135 | 1.6E-34 | – | |
| SUPERFAMILY | 17 | 145 | 129 | 1.27E-35 | ||
| SMART | 18 | 130 | 113 | 3.3E-31 | ||
| ProSiteProfiles | 19 | 134 | 116 | 42.629 | ||
| Pfam | 20 | 129 | 110 | 4.0E-24 | ||
| CDD | 21 | 134 | 114 | 1.57678E-29 | ||
| Gene3D | 196 | 259 | 64 | 2.2E-28 | – | |
| SUPERFAMILY | 198 | 257 | 60 | 3.23E-17 | ||
| TIGRFAM | 200 | 253 | 54 | 2.6E-21 | ||
| Pfam | 202 | 252 | 51 | 1.5E-6 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphorelay signal transduction system | A conserved series of molecular signals found in prokaryotes and eukaryotes; involves autophosphorylation of a histidine kinase and the transfer of the phosphate group to an aspartate that then acts as a phospho-donor to response regulator proteins. | ||
| Molecular function | DNA binding | Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid). | ||
| Molecular function | DNA-binding transcription factor activity | A protein or a member of a complex that interacts selectively and non-covalently with a specific DNA sequence (sometimes referred to as a motif) within the regulatory region of a gene to modulate transcription. Regulatory regions include promoters (proximal and distal) and enhancers. Genes are transcriptional units, and include bacterial operons. | ||
| Biological process | Signal transduction | The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell. |
Expression pattern of LotjaGi6g1v0099200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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