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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR015424
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 379 results. Now displaying 3 of 8 with 50 rows per page. This search has taken 5.795s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj3g3v2810130.2
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr3 34651123 34654360 +
2 domain predictions
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Lj3g3v2810130.4
n.a. PREDICTED: probable aminotransferase TAT2-like isoform X1 [Cicer arietinum] gi|502082746|ref|XP_004487261.1| chr3 34651123 34659154 +
2 domain predictions
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Lj3g3v3336200.1
n.a. PREDICTED: arginine decarboxylase-like [Cicer arietinum] gi|502149028|ref|XP_004507364.1| chr3 40606032 40608772 +
2 domain predictions
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Lj3g3v3430110.1
n.a. PREDICTED: 8-amino-7-oxononanoate synthase-like [Glycine max] gi|356508270|ref|XP_003522881.1| chr3 42035421 42047005 +
2 domain predictions
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Lj3g3v3558220.1
n.a. Pyridoxal phosphate-dependent transferases superfamily protein [Theobroma cacao] gi|508701290|gb|EOX93186.1| chr3 43374900 43379035 -
2 domain predictions
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Lj3g3v3569310.1
n.a. PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial-like [Cicer arietinum] gi|502144355|ref|XP_004505667.1| chr3 43414276 43425959 -
2 domain predictions
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Lj3g3v3569310.2
n.a. Aminotransferase y4uB [Medicago truncatula] gi|357474027|ref|XP_003607298.1| chr3 43416937 43427687 -
2 domain predictions
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Lj4g3v0166240.1
n.a. PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1| chr4 2035322 2038587 +
2 domain predictions
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Lj4g3v0166320.1
n.a. PREDICTED: glutamate decarboxylase 1-like [Glycine max] gi|356525016|ref|XP_003531123.1| chr4 2071285 2073830 +
2 domain predictions
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Lj4g3v0338190.1
n.a. PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Glycine max] gi|356525892|ref|XP_003531555.1| chr4 4292849 4296644 +
2 domain predictions
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Lj4g3v0412700.1
n.a. PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Cicer arietinum] gi|502142297|ref|XP_004504888.1| chr4 5388563 5403348 -
2 domain predictions
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Lj4g3v0412700.2
n.a. PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Cicer arietinum] gi|502142297|ref|XP_004504888.1| chr4 5394558 5403348 -
2 domain predictions
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Lj4g3v0461370.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr4 6785590 6787674 -
2 domain predictions
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Lj4g3v0706600.1
n.a. 1-aminocyclopropane-1-carboxylic acid synthase [Vigna radiata] gi|5231127|gb|AAD41083.1|AF151961_1 chr4 11651297 11652844 -
2 domain predictions
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Lj4g3v0865390.1
n.a. Pyridoxal phosphate-dependent transferases superfamily protein [Theobroma cacao] gi|508699383|gb|EOX91279.1| chr4 13076588 13080783 +
2 domain predictions
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Lj4g3v1287390.1
n.a. PREDICTED: probable aminotransferase ACS10-like [Cicer arietinum] gi|502160097|ref|XP_004511632.1| chr4 19008964 19012219 +
2 domain predictions
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Lj4g3v1328840.1
n.a. PREDICTED: molybdenum cofactor sulfurase-like [Glycine max] gi|356513685|ref|XP_003525541.1| chr4 19703377 19705656 -
2 domain predictions
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Lj4g3v1451990.1
n.a. PREDICTED: tryptophan aminotransferase-related protein 2-like [Glycine max] gi|356513633|ref|XP_003525516.1| chr4 22453296 22464236 -
2 domain predictions
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Lj4g3v2081410.1
n.a. PREDICTED: l-Lysine-8-amino-7-oxononanoate aminotransferase-like [Glycine max] gi|356550752|ref|XP_003543748.1| chr4 28606786 28617233 +
2 domain predictions
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Lj4g3v2313530.1
n.a. PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| chr4 32221070 32228305 +
2 domain predictions
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Lj4g3v2468430.1
n.a. PREDICTED: ornithine aminotransferase, mitochondrial-like [Cicer arietinum] gi|502141592|ref|XP_004504557.1| chr4 33764399 33771393 +
2 domain predictions
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Lj4g3v2592460.1
n.a. serine hydroxymethyltransferase [Glycine max] gi|389548688|gb|AFK83582.1| chr4 34721353 34724412 +
2 domain predictions
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Lj4g3v2692470.1
n.a. Serine hydroxymethyltransferase [Medicago truncatula] gi|357445445|ref|XP_003593000.1| chr4 36326704 36330165 +
2 domain predictions
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Lj4g3v2742940.1
n.a. Cysteine desulfurase [Medicago truncatula] gi|357519939|ref|XP_003630258.1| chr4 36880672 36883426 -
2 domain predictions
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Lj4g3v2800580.1
n.a. PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial-like [Cicer arietinum] gi|502140049|ref|XP_004504034.1| chr4 37478138 37481931 +
2 domain predictions
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Lj4g3v2819890.1
n.a. PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cicer arietinum] gi|502140078|ref|XP_004504047.1| chr4 37579976 37583899 +
2 domain predictions
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Lj4g3v2990130.1
n.a. PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Cicer arietinum] gi|502139181|ref|XP_004503673.1| chr4 39511981 39515462 -
2 domain predictions
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Lj4g3v3017360.1
n.a. PREDICTED: 1-aminocyclopropane-1-carboxylate synthase 7-like [Glycine max] gi|356523125|ref|XP_003530192.1| chr4 40489493 40491858 +
2 domain predictions
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Lj5g3v0290740.1
n.a. PREDICTED: long chain base biosynthesis protein 1-like [Cicer arietinum] gi|502096098|ref|XP_004490625.1| chr5 2559188 2570480 -
2 domain predictions
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Lj5g3v0404800.1
n.a. PREDICTED: glycine dehydrogenase [decarboxylating] gi|502125338|ref|XP_004498895.1| chr5 3770911 3779038 -
2 domain predictions
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Lj5g3v0527640.1
n.a. aspartate aminotransferase [Lotus corniculatus] gi|2605932|gb|AAC12674.1| chr5 5685547 5691726 +
2 domain predictions
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Lj5g3v0527640.2
n.a. aspartate aminotransferase [Lotus corniculatus] gi|2605932|gb|AAC12674.1| chr5 5690135 5691726 +
2 domain predictions
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Lj5g3v1357110.1
n.a. PREDICTED: L-allo-threonine aldolase-like [Glycine max] gi|356576676|ref|XP_003556456.1| chr5 20661523 20681533 +
2 domain predictions
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Lj5g3v1357110.2
n.a. L-allo-threonine aldolase [Medicago truncatula] gi|357441389|ref|XP_003590972.1| chr5 20663170 20681533 +
2 domain predictions
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Lj5g3v1601920.1
n.a. PREDICTED: kynurenine--oxoglutarate transaminase 1-like isoform X1 [Cicer arietinum] gi|502117747|ref|XP_004495926.1| chr5 23294523 23298490 -
2 domain predictions
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Lj5g3v2029520.1
n.a. Molybdenum cofactor sulfurase [Medicago truncatula] gi|357444119|ref|XP_003592337.1| chr5 28699818 28703980 +
2 domain predictions
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Lj6g3v0247670.1
n.a. PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum] gi|502135169|ref|XP_004502243.1| chr6 2848897 2851460 +
2 domain predictions
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Lj6g3v0247680.1
n.a. PREDICTED: serine hydroxymethyltransferase 1-like [Cicer arietinum] gi|502135169|ref|XP_004502243.1| chr6 2848897 2851862 +
2 domain predictions
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Lj6g3v0393220.1
n.a. glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1| chr6 3616400 3622565 +
2 domain predictions
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Lj6g3v0393230.1
n.a. glutamate decarboxylase [Glycine max] gi|157890422|dbj|BAF80895.1| chr6 3616682 3622297 +
2 domain predictions
 –
Lj6g3v0527170.1
n.a. PREDICTED: bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase-like [Cicer arietinum] gi|502140078|ref|XP_004504047.1| chr6 5295564 5299303 +
2 domain predictions
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Lj6g3v0937010.1
n.a. Alanine glyoxylate aminotransferase [Medicago truncatula] gi|357459757|ref|XP_003600159.1| chr6 10511627 10516221 +
2 domain predictions
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Lj6g3v1078040.3
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356534053|ref|XP_003535572.1| chr6 12673162 12674350 -
2 domain predictions
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Lj6g3v1078410.1
n.a. PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Cicer arietinum] gi|502142297|ref|XP_004504888.1| chr6 12808859 12815704 +
2 domain predictions
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Lj6g3v1679480.1
n.a. PREDICTED: tyrosine/DOPA decarboxylase 2-like [Glycine max] gi|356558045|ref|XP_003547319.1| chr6 18698259 18700169 -
2 domain predictions
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Lj6g3v1692380.1
n.a. PREDICTED: cysteine desulfurase 2, chloroplastic-like [Cicer arietinum] gi|502135118|ref|XP_004502227.1| chr6 18775372 18779440 -
2 domain predictions
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Lj6g3v1966340.1
n.a. serine hydroxymethyltransferase 4 [Glycine max] gi|351724373|ref|NP_001238335.1| chr6 22505251 22508719 +
2 domain predictions
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Lj6g3v2218710.1
n.a. PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic-like [Glycine max] gi|356525892|ref|XP_003531555.1| chr6 25856835 25860630 -
2 domain predictions
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Lj6g3v2222040.1
n.a. PREDICTED: histidine decarboxylase-like [Glycine max] gi|356558589|ref|XP_003547587.1| chr6 25956395 25961032 +
2 domain predictions
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LotjaGi0g1v0000100.1
n.a. Molybdenum cofactor sulfurase; TAIR: AT5G51920.1 Pyridoxal phosphate (PLP)-dependent transferases superfamily protein; Swiss-Prot: sp|Q9C5X8|MOCOS_ARATH Molybdenum cofactor sulfurase; TrEMBL-Plants: tr|A0A0S3TBS8|A0A0S3TBS8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi0g1v0000100 LjG1.1_chr0 777410 779794 +
2 domain predictions
 –