Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR016160
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

Export options

Download the entire search result as a CSV file.

We have found 70 results. Now displaying 2 of 2 with 50 rows per page. This search has taken 6.669s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi4g1v0286700.4
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|I3SVI9|I3SVI9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0286700 LjG1.1_chr4 65885307 65889172 +
2 domain predictions
2 GO terms
LotjaGi4g1v0286700.5
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|I3SVI9|I3SVI9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0286700 LjG1.1_chr4 65885327 65889172 +
2 domain predictions
2 GO terms
LotjaGi4g1v0330300.1
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|I1KMR6|I1KMR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0330300 LjG1.1_chr4 70958260 70967561 +
2 domain predictions
2 GO terms
LotjaGi4g1v0330300.3
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|I1KMR6|I1KMR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0330300 LjG1.1_chr4 70958741 70966236 +
2 domain predictions
2 GO terms
LotjaGi4g1v0330600_LC.1
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|I1KMR6|I1KMR6_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0330600_LC LjG1.1_chr4 70972602 70980909 +
2 domain predictions
2 GO terms
LotjaGi4g1v0450100.1
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I3S5U5|I3S5U5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0450100 LjG1.1_chr4 82226064 82230720 +
2 domain predictions
2 GO terms
LotjaGi4g1v0450100.3
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I3S5U5|I3S5U5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0450100 LjG1.1_chr4 82228217 82230720 +
2 domain predictions
2 GO terms
LotjaGi4g1v0450400.1
n.a. Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|G7L8Y6|G7L8Y6_MEDTR Cytosolic aldehyde dehydrogenase RF2C; Found in the gene: LotjaGi4g1v0450400 LjG1.1_chr4 82241879 82247041 +
2 domain predictions
2 GO terms
LotjaGi5g1v0054400.1
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151RT76|A0A151RT76_CAJCA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0054400 LjG1.1_chr5 9258393 9266406 -
2 domain predictions
2 GO terms
LotjaGi5g1v0054400.2
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151RT76|A0A151RT76_CAJCA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0054400 LjG1.1_chr5 9258758 9265301 -
2 domain predictions
2 GO terms
LotjaGi5g1v0054400.3
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|P93338|GAPN_NICPL NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151RT76|A0A151RT76_CAJCA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi5g1v0054400 LjG1.1_chr5 9258943 9265338 -
2 domain predictions
2 GO terms
LotjaGi6g1v0205000.2
n.a. Aldehyde dehydrogenase; TAIR: AT2G24270.1 aldehyde dehydrogenase 11A3; Swiss-Prot: sp|Q1WIQ6|GAPN_ARATH NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; TrEMBL-Plants: tr|A0A151RDE3|A0A151RDE3_CAJCA NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Found in the gene: LotjaGi6g1v0205000 LjG1.1_chr6 50212834 50222438 -
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.1
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106356 57112691 +
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.2
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106445 57112634 +
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.3
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106601 57112312 +
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.4
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106601 57112312 +
2 domain predictions
2 GO terms
LotjaGi6g1v0258400.5
n.a. Aldehyde dehydrogenase; TAIR: AT3G66658.2 aldehyde dehydrogenase 22A1; Swiss-Prot: sp|Q0WSF1|AL221_ARATH Aldehyde dehydrogenase 22A1; TrEMBL-Plants: tr|A0A1J7G6D4|A0A1J7G6D4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0258400 LjG1.1_chr6 57106601 57112312 +
2 domain predictions
2 GO terms
LotjaGi6g1v0348500.1
n.a. Aldehyde dehydrogenase; TAIR: AT2G14170.1 aldehyde dehydrogenase 6B2; Swiss-Prot: sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; TrEMBL-Plants: tr|A0A1J7GWW1|A0A1J7GWW1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0348500 LjG1.1_chr6 66127733 66137100 +
2 domain predictions
2 GO terms
LotjaGi6g1v0348500.2
n.a. Aldehyde dehydrogenase; TAIR: AT2G14170.1 aldehyde dehydrogenase 6B2; Swiss-Prot: sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; TrEMBL-Plants: tr|A0A1J7GWW1|A0A1J7GWW1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0348500 LjG1.1_chr6 66128013 66134192 +
2 domain predictions
2 GO terms
LotjaGi6g1v0348500.3
n.a. Aldehyde dehydrogenase; TAIR: AT2G14170.1 aldehyde dehydrogenase 6B2; Swiss-Prot: sp|Q0WM29|MMSA_ARATH Methylmalonate-semialdehyde dehydrogenase [acylating], mitochondrial; TrEMBL-Plants: tr|I3T9T5|I3T9T5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0348500 LjG1.1_chr6 66128484 66134192 +
2 domain predictions
2 GO terms