Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi4g1v0450100 |
| Transcript ID | LotjaGi4g1v0450100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Aldehyde dehydrogenase, putative; TAIR: AT3G24503.1 aldehyde dehydrogenase 2C4; Swiss-Prot: sp|Q56YU0|AL2C4_ARATH Aldehyde dehydrogenase family 2 member C4; TrEMBL-Plants: tr|I3S5U5|I3S5U5_LOTJA Uncharacterized protein; Found in the gene: LotjaGi4g1v0450100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr4:82228217..82230720) extracted from Lotus japonicus Gifu genome v1.2.
AGTGACATAATATTTATATATGATAATCAGGAGAGAGCAAAAATTATGATGAAACTCGCAGACTTAATTGATGAAAACAC AGAAGAACTAGCAGCATTGGATGCCATTGATGCCGGCAAGTTGTACCACATGTGCAAGGCTATGGACATTCCTGGAGCAG CAAAAACTTTGCGTTACTTTGCCGGTGCTGCCGATAAAATTCACGGCGAGGTATTAAAAGCGTCACGGGAGCTTCATGCT TACACACTGATGGAACCGGTTGGTGTTGTAGGCCACATCATTCCCTGGAATTTCCCAGCCTCCTTCTTCTTCACCAAGGT TAGCCCTGCCTTAGCTGCAGGGTGCACCATGGTCCTCAAGCCTGCAGAGCAAACACCACTCTCTGCTTTGTTCTGTGCTC ATCTTGCTAAATTGGTAGGATTTCAGCTATAAATGTTTCATTTTTTTTTTATCAAGATCAAGGTTTTAAATTGAGGTTGT GGCAACAATCACGTCAGTTATGTTGTGGTCTTCCTTTCGTATTGTGAACAAATGTCGCGGTCAAAATCACGGACCTTGAT TTAAAGCCATGATCAAGATAAGTAACTGGAGCATAAGCTTAACTGGTTCTTCTTGTTTTTTTTCATTCTTAAAAGGCTGG AATCCCAGATGGAGTGCTCAATGTAGTACCTGGATTTGGCTCAACTGCTGGTGCTGCAGTGAGCTCACACATGGATATTG ATGCGGTAATTTACATGTCAAAATCAAATTTCATAGATGATTCACAAACATTTATATTATCATTCAACAATGATATTACT AAATGAGAATTGATTATGAGGTTCTCCGACAGGGAACCAAACATACGCTAACACTTTGTGCATGTTTAGATATATTGTGA GTAAAAATCACAATGACAGAAGAACAATTTCCTTTAGCTTTTATGGCTATCTGTCGTGATTTTGCTTCTTCACCAAGATT TTCCAACGTGTATCCAAAAATACACTTATAGCTTCTGCCTTCTAACCTTAAGTGATTCGATATTTAACCTAAGAAACAAA TATGCTATAAGTCAAACATTTGTAAGTACCATGATCTTAAATAAGATTTCTTAAATTGCATTGGTGTATGTTTAGGTCAG CTTTACTGGTTCAACACAAACAGGGCGTGAGGTAATGAAGGCAGCAGCTAGCAGTAACTTGAAACGAGTTTCGCTGGAAT TAGGAGGCAAATCACCCCTCATAATTTTCAATGATGCTGATATAGACAAAGCTGCTGAACTTGCTCTATACGGCATCCTA TTAAATAAGGTGGAATGTTAGCTTTCATGAAATCATGTATTTTCAAACAACATCCTCATACTTATATCTATGATGACAAT AATTTTATTCCTCCTTGATCAAAACAGGGTGAAGTTTGTGTTGCAAGTTCCCGTGTGTTCGTTCAAGAAGGGATCTATGA TGAATTTGAGAAGAAATTGGTGGAGAAGGCAAAAGCTTGGGTCGTTGGGGACCCTTTTGATCCTAAAGTTCAACAAGGGC CTCAGGTGAGGATAAAATGTACAGACAAAGGGCTTGAGTTCCTTTAAAATTTCATACTTGTCGCGCGTGTTCTCGAATTT TAATCCACCGAATATGGTTTTTAACTGAAAACCAAACATGCTCTAAGTTGTTATCTGGTCTTGTAACTAAGATCTTTGAT AGTATTTCCTAAATTTCTTAGTAGGCTTCTGAAGACAGAAATAAGATAAATAATCTATAAATTACAATTTGTAACTTCGT TATAAAAGTGACTATAGAGTTTCCCACCACATAACCAAACACGCTAATTAAGAATCCCGGTCTTTTGGCTAACATTTTTA TGTTTCTTGTAGGTTGACAAGAAACAATTTGAAAAAATTCTTTCATATATTGAGCATGGAAAGAGAGAAGGAGCTACCCT TTTGACTGGGGGTAAATCAGTGGGTAACAAAGGCTACTACATTGAACCAACCATTTTCTCCAATGTAAAGGTGAGTTCCA AGTCCAAAAAAGGCACCAAATTAGGCATTTTCAGCATAATTAGATAACTGACTATTTTGTTTCACACTCTGAAAATTTAG GAGGATATGCTTATAGTACAGGATGAAATATTTGGCCCTGTGATGGCACTGAAGAAGTTTAAGTAAGTTTCTTTTAGTTA TTATTTTGTTGTATTATTGTGCTTGATTTTGAAGTGTAAGCAAGTTTCTTTTTGTTATTATGAACAACAGGACTGTTGAG GAAGCAATTAAGAGTGCTAACAATACCAGATATGGTTTAGCAGCTGGCATTATGACCAAGAACTTGGATATAGCAAACAC AGTGTCAAGGTCCATTCGTGCAGGCAGTGTTTGGATCAACTGTTATTTTGCCATTGACAATGATATTCCTTTCGGAGGGT ATAAGGCGAGTGGGTTTGGAAAAGATTATGGATTGGAAGCCATTCACAAATACTTACAAGTTAAATCTGTTGTAACTCCC ATTTACAATTCTCCTTGGCTTTGA
CDS sequence (LotjaGi4g1v0450100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGAAACTCGCAGACTTAATTGATGAAAACACAGAAGAACTAGCAGCATTGGATGCCATTGATGCCGGCAAGTTGTA CCACATGTGCAAGGCTATGGACATTCCTGGAGCAGCAAAAACTTTGCGTTACTTTGCCGGTGCTGCCGATAAAATTCACG GCGAGGTATTAAAAGCGTCACGGGAGCTTCATGCTTACACACTGATGGAACCGGTTGGTGTTGTAGGCCACATCATTCCC TGGAATTTCCCAGCCTCCTTCTTCTTCACCAAGGTTAGCCCTGCCTTAGCTGCAGGGTGCACCATGGTCCTCAAGCCTGC AGAGCAAACACCACTCTCTGCTTTGTTCTGTGCTCATCTTGCTAAATTGGCTGGAATCCCAGATGGAGTGCTCAATGTAG TACCTGGATTTGGCTCAACTGCTGGTGCTGCAGTGAGCTCACACATGGATATTGATGCGGTCAGCTTTACTGGTTCAACA CAAACAGGGCGTGAGGTAATGAAGGCAGCAGCTAGCAGTAACTTGAAACGAGTTTCGCTGGAATTAGGAGGCAAATCACC CCTCATAATTTTCAATGATGCTGATATAGACAAAGCTGCTGAACTTGCTCTATACGGCATCCTATTAAATAAGGGTGAAG TTTGTGTTGCAAGTTCCCGTGTGTTCGTTCAAGAAGGGATCTATGATGAATTTGAGAAGAAATTGGTGGAGAAGGCAAAA GCTTGGGTCGTTGGGGACCCTTTTGATCCTAAAGTTCAACAAGGGCCTCAGGTTGACAAGAAACAATTTGAAAAAATTCT TTCATATATTGAGCATGGAAAGAGAGAAGGAGCTACCCTTTTGACTGGGGGTAAATCAGTGGGTAACAAAGGCTACTACA TTGAACCAACCATTTTCTCCAATGTAAAGGAGGATATGCTTATAGTACAGGATGAAATATTTGGCCCTGTGATGGCACTG AAGAAGTTTAAGACTGTTGAGGAAGCAATTAAGAGTGCTAACAATACCAGATATGGTTTAGCAGCTGGCATTATGACCAA GAACTTGGATATAGCAAACACAGTGTCAAGGTCCATTCGTGCAGGCAGTGTTTGGATCAACTGTTATTTTGCCATTGACA ATGATATTCCTTTCGGAGGGTATAAGGCGAGTGGGTTTGGAAAAGATTATGGATTGGAAGCCATTCACAAATACTTACAA GTTAAATCTGTTGTAACTCCCATTTACAATTCTCCTTGGCTTTGA
Protein sequence (LotjaGi4g1v0450100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMKLADLIDENTEELAALDAIDAGKLYHMCKAMDIPGAAKTLRYFAGAADKIHGEVLKASRELHAYTLMEPVGVVGHIIP WNFPASFFFTKVSPALAAGCTMVLKPAEQTPLSALFCAHLAKLAGIPDGVLNVVPGFGSTAGAAVSSHMDIDAVSFTGST QTGREVMKAAASSNLKRVSLELGGKSPLIIFNDADIDKAAELALYGILLNKGEVCVASSRVFVQEGIYDEFEKKLVEKAK AWVVGDPFDPKVQQGPQVDKKQFEKILSYIEHGKREGATLLTGGKSVGNKGYYIEPTIFSNVKEDMLIVQDEIFGPVMAL KKFKTVEEAIKSANNTRYGLAAGIMTKNLDIANTVSRSIRAGSVWINCYFAIDNDIPFGGYKASGFGKDYGLEAIHKYLQ VKSVVTPIYNSPWL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 414 | 414 | 2.1E-267 | – | |
| PANTHER | 1 | 414 | 414 | 2.1E-267 | – | |
| Pfam | 1 | 404 | 404 | 5.5E-161 | ||
| Gene3D | 1 | 403 | 403 | 6.8E-172 | ||
| SUPERFAMILY | 2 | 410 | 409 | 1.26E-150 | ||
| ProSitePatterns | 180 | 187 | 8 | - | ||
| Gene3D | 184 | 373 | 190 | 6.8E-172 | ||
| ProSitePatterns | 208 | 219 | 12 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Molecular function | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi4g1v0450100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…