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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000235
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 6 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.572s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0199009.1
n.a. PREDICTED: 40S ribosomal protein S5-like [Cicer arietinum] gi|502078783|ref|XP_004486053.1| chr0 97453451 97455995 -
3 domain predictions
1 GO term
Lj1g3v4763800.1
n.a. PREDICTED: 40S ribosomal protein S5-like [Glycine max] gi|356530665|ref|XP_003533901.1| chr1 57159514 57162793 -
3 domain predictions
1 GO term
LotjaGi1g1v0742600.1
n.a. 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|O65731|RS5_CICAR 40S ribosomal protein S5; TrEMBL-Plants: tr|I3SG74|I3SG74_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0742600 LjG1.1_chr1 131624809 131628170 -
3 domain predictions
1 GO term
LotjaGi1g1v0742600.2
n.a. 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1; TrEMBL-Plants: tr|A0A151QZT3|A0A151QZT3_CAJCA 40S ribosomal protein S5; Found in the gene: LotjaGi1g1v0742600 LjG1.1_chr1 131625483 131627841 -
3 domain predictions
1 GO term
LotjaGi5g1v0112400.1
n.a. 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|O65731|RS5_CICAR 40S ribosomal protein S5; TrEMBL-Plants: tr|V7BV97|V7BV97_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0112400 LjG1.1_chr5 22274995 22278500 -
3 domain predictions
1 GO term
LotjaGi5g1v0112400.2
n.a. 30S ribosomal protein S7; TAIR: AT2G37270.1 ribosomal protein 5B; Swiss-Prot: sp|Q9ZUT9|RS51_ARATH 40S ribosomal protein S5-1; TrEMBL-Plants: tr|A0A151QZT3|A0A151QZT3_CAJCA 40S ribosomal protein S5; Found in the gene: LotjaGi5g1v0112400 LjG1.1_chr5 22275815 22278283 -
3 domain predictions
1 GO term