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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000949
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
or

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Download the entire search result as a CSV file.

We have found 5 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 7.479s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0293379.1
n.a. PREDICTED: AT-rich interactive domain-containing protein 1-like isoform X1 [Cicer arietinum] gi|502157133|ref|XP_004510770.1| chr0 152279640 152283899 -
2 domain predictions
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Lj1g3v2692560.1
n.a. PREDICTED: AT-rich interactive domain-containing protein 2-like isoform X1 [Cicer arietinum] gi|502105266|ref|XP_004492764.1| chr1 31237251 31242817 -
2 domain predictions
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LotjaGi1g1v0478400.1
n.a. AT-rich interactive domain protein; TAIR: AT2G46040.1 ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein; Swiss-Prot: sp|Q84JT7|ARID1_ARATH AT-rich interactive domain-containing protein 1; TrEMBL-Plants: tr|K7LG34|K7LG34_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0478400 LjG1.1_chr1 99016994 99022681 -
2 domain predictions
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LotjaGi3g1v0384700.1
n.a. AT-rich interactive domain protein; TAIR: AT2G46040.1 ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein; Swiss-Prot: sp|Q84JT7|ARID1_ARATH AT-rich interactive domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2SPI1|A0A0B2SPI1_GLYSO AT-rich interactive domain-containing protein 1; Found in the gene: LotjaGi3g1v0384700 LjG1.1_chr3 77957860 77962279 -
2 domain predictions
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LotjaGi3g1v0384700.2
n.a. AT-rich interactive domain protein; TAIR: AT2G46040.1 ARID/BRIGHT AND ELM2 DNA-binding domain-containing protein; Swiss-Prot: sp|Q84JT7|ARID1_ARATH AT-rich interactive domain-containing protein 1; TrEMBL-Plants: tr|A0A0B2SPI1|A0A0B2SPI1_GLYSO AT-rich interactive domain-containing protein 1; Found in the gene: LotjaGi3g1v0384700 LjG1.1_chr3 77957924 77962103 -
2 domain predictions
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