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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR000967
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 8 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.808s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0101599.1
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Glycine max] gi|356527906|ref|XP_003532547.1| chr0 43124517 43127956 +
3 domain predictions
4 GO terms
Lj2g3v0658160.1
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL1-like [Cicer arietinum] gi|502163239|ref|XP_004512772.1| chr2 10518406 10522621 -
3 domain predictions
4 GO terms
Lj6g3v0521560.1
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Cicer arietinum] gi|502129986|ref|XP_004500492.1| chr6 5063971 5080255 -
3 domain predictions
4 GO terms
Lj6g3v0521560.2
n.a. PREDICTED: NF-X1-type zinc finger protein NFXL2-like [Cicer arietinum] gi|502129986|ref|XP_004500492.1| chr6 5063971 5080255 -
2 domain predictions
4 GO terms
LotjaGi2g1v0192800.1
n.a. NF-X1-type zinc finger protein NFXL1; TAIR: AT1G10170.2 NF-X-like 1; Swiss-Prot: sp|Q9SY59|NFXL1_ARATH NF-X1-type zinc finger protein NFXL1; TrEMBL-Plants: tr|A0A1J7GX75|A0A1J7GX75_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0192800 LjG1.1_chr2 62482599 62487046 -
3 domain predictions
4 GO terms
LotjaGi4g1v0465300.1
n.a. NF-X1-type zinc finger protein NFXL1; TAIR: AT1G10170.1 NF-X-like 1; Swiss-Prot: sp|Q9SY59|NFXL1_ARATH NF-X1-type zinc finger protein NFXL1; TrEMBL-Plants: tr|A0A1J7GX75|A0A1J7GX75_LUPAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0465300 LjG1.1_chr4 83550708 83555157 +
3 domain predictions
4 GO terms
LotjaGi6g1v0075600.1
n.a. NF-X1-type zinc finger protein NFXL2; TAIR: AT5G05660.1 NF-X1-type zinc finger protein NFXL2; Swiss-Prot: sp|Q9FFK8|NFXL2_ARATH NF-X1-type zinc finger protein NFXL2; TrEMBL-Plants: tr|G7JBA9|G7JBA9_MEDTR NF-X1-type zinc finger protein NFXL2; Found in the gene: LotjaGi6g1v0075600 LjG1.1_chr6 14294699 14304983 +
3 domain predictions
4 GO terms
LotjaGi6g1v0075600.2
n.a. NF-X1-type zinc finger protein NFXL2; TAIR: AT5G05660.1 NF-X1-type zinc finger protein NFXL2; Swiss-Prot: sp|Q9FFK8|NFXL2_ARATH NF-X1-type zinc finger protein NFXL2; TrEMBL-Plants: tr|G7JBA9|G7JBA9_MEDTR NF-X1-type zinc finger protein NFXL2; Found in the gene: LotjaGi6g1v0075600 LjG1.1_chr6 14294913 14304576 +
3 domain predictions
4 GO terms