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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR001124
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 12 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.700s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj2g3v0205750.1
n.a. Bactericidal permeability-increasing protein [Medicago truncatula] gi|357494733|ref|XP_003617655.1| chr2 3698686 3700771 +
2 domain predictions
1 GO term
Lj2g3v0205750.2
n.a. Lipid-binding serum glycoprotein family protein isoform 2 [Theobroma cacao] gi|508701509|gb|EOX93405.1| chr2 3699594 3700771 +
2 domain predictions
1 GO term
Lj2g3v2856000.1
n.a. Lipid-binding serum glycoprotein family protein isoform 2 [Theobroma cacao] gi|508701509|gb|EOX93405.1| chr2 37267341 37271010 +
3 domain predictions
1 GO term
Lj2g3v2856000.2
n.a. Lipid-binding serum glycoprotein family protein isoform 1 [Theobroma cacao] gi|508701508|gb|EOX93404.1| chr2 37267341 37271010 +
3 domain predictions
1 GO term
Lj2g3v3224210.1
n.a. Bactericidal permeability-increasing protein [Medicago truncatula] gi|357494733|ref|XP_003617655.1| chr2 41217522 41222228 -
3 domain predictions
1 GO term
Lj6g3v0819000.1
n.a. Bactericidal permeability-increasing protein [Medicago truncatula] gi|357494733|ref|XP_003617655.1| chr6 8274634 8278515 +
3 domain predictions
1 GO term
LotjaGi1g1v0023000.1
n.a. Lipid-binding serum glycoprotein family protein, putative; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|I1M6L4|I1M6L4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0023000 LjG1.1_chr1 2792916 2800721 +
2 domain predictions
1 GO term
LotjaGi1g1v0069000.1
n.a. Lipid-binding serum glycoprotein; TAIR: AT1G04970.2 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|A0A0B2SIV3|A0A0B2SIV3_GLYSO Putative BPI/LBP family protein; Found in the gene: LotjaGi1g1v0069000 LjG1.1_chr1 9509605 9514688 -
3 domain predictions
1 GO term
LotjaGi1g1v0069000.2
n.a. Lipid-binding serum glycoprotein; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|A0A0B2SIV3|A0A0B2SIV3_GLYSO Putative BPI/LBP family protein; Found in the gene: LotjaGi1g1v0069000 LjG1.1_chr1 9509605 9514688 -
3 domain predictions
1 GO term
LotjaGi1g1v0069000.3
n.a. Lipid-binding serum glycoprotein; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|A0A0B2SIV3|A0A0B2SIV3_GLYSO Putative BPI/LBP family protein; Found in the gene: LotjaGi1g1v0069000 LjG1.1_chr1 9510561 9514296 -
3 domain predictions
1 GO term
LotjaGi2g1v0097800_LC.1
n.a. Lipid-binding serum glycoprotein; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|A0A151SBP7|A0A151SBP7_CAJCA Putative BPI/LBP family protein family; Found in the gene: LotjaGi2g1v0097800_LC LjG1.1_chr2 32030433 32032647 +
2 domain predictions
1 GO term
LotjaGi6g1v0153400.1
n.a. Lipid-binding serum glycoprotein family protein, putative; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|V7BPL8|V7BPL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0153400 LjG1.1_chr6 43140395 43146050 +
3 domain predictions
1 GO term