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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0153400 |
| Transcript ID | LotjaGi6g1v0153400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Lipid-binding serum glycoprotein family protein, putative; TAIR: AT1G04970.1 lipid-binding serum glycoprotein family protein; Swiss-Prot: sp|Q9MAU5|Y1049_ARATH Putative BPI/LBP family protein At1g04970; TrEMBL-Plants: tr|V7BPL8|V7BPL8_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0153400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:43140395..43146050) extracted from Lotus japonicus Gifu genome v1.2.
TGCGTCTTCAAGTGTTAGAATATACTGAAAACAAAAGTTACACGTTACCTGGTTATCGAACTCACAAAGTCTCTAACATG ATAAATCCAACTCAACATCACATATATAATGAACAAAACTCCAACACCAACCAATTCCTGCTACCTACGTCTCCATTCAT AGTCCCTGGTCCTCCCTCAATTTTAGAAACCAAGTTCCAATAGTAACAACCTTAACAAGAAAGCCTTCTCTTCAGAACTT CAACAGCTTTCCCCGCTGTTTCATCATATGGGTGTCTCCAATTTTTCATCTTTCACTGTATAAGCATCACAAACCTATGT TCTAGCAAGTTTTCAAGCAACTTTCTGTGCCAATATTCAATGGATTAGCCATGTATATATTTATGCTAAGTTGCTAACTT TATCCTCTCATATCCAAAAATTCATGGCACCCTCTATTTTCTTCGTTCTGCTATCCCTTCTGTTGATTCCAGCAAGTGGT TATGTCCAACTCTATGAAGATGGTTTCATCTCTGGGGTCATATCTGATAAGGGTCTCGATTTTGCGAAGGATTTGCTGAT AGAGAAAGGTATTGCCTCTCTTGTTCTGCTTCAGCTGCCAGAGATTGAAAACTCTGCCAAAGTCCCACTTGTTGGAAATG CTAAAGTGGTTCTTTCTGATATCACAATCAAGGATATTCAAATCAATTCTTCATCTGTTAAGACTGGAGAGAGTGGCATC GTTCTAGTCATTTCAGGTGCCACTGCAGATTTGAGTATGAAGTGGAGGTATTCTTGCAGCAGTTGGTTGATCCCAATTGG GATTTCAGATAGTGGAACTGCTTCAGTGAAGGTATAAACCTATAATTTTACCCATGTTTTTACTTCCTTTGATCTTTTTG TACACCTGCAGTTTTAGTTTTGATGAATTATAGCTATAATTTGAAGTTTTGACCTTGCAACAATTTTTTACTCTAGTTGA ATAGTTTTTTCAAAATTGATTAGCCTGGTTGTCCTAGGGAATTTATAAACAAGGTTTGAATGAAGTTTGTCCTAGTCTTG TAATTGAAGTTAATTAACTTGATACAACTTGGCCAATTCTCATATCAAGGGTATTTGAAAGTTGAAACTACAGAATGGAA CTTTAGAGTCTAGACCACTTGGATATCATATCATGAACCAACTACCCCTAAAGGTTAAACTTGTTGGTTAAAGAAACCTA AATGGTTTTATATCATATTTCTAACAACTTAATTTAAGATTTGCATAAGCAAGAGCAAAAAATATCTATAACCGTTTCCT TATGTTTAGAAAGGTCGTAGCTAACATGGAAATCATATGGAAATAAGTATAATGAGGATTTTTGGTTATAGAATTAGGAT TCCAGGTCATAAGTCAGTACAATTGAAACAACAGATTAGAAATAGGACAGAAAGAAAGAGAAAAAGATGTGGTATATAGG TTGTATTGTAGGTGAACAACTAAGCAATTGTAGTTCAATTTCAGTATCTGATTGGTAGAAACCTGTGTAAATAGCAGAAT TAATACTCAGGCCCTCACAAACACTACACACATGTGCTTTTCAATCAAAAATATCCCTCACTCTGTTGTGTTGTGCTATG TTTGGAAGGTTAAAGGCATGCAAGTAGGGCTTACAGTAAATTTAAAGAACCAAGAAGGAACTCTTAAGTTGAGTCTCTTA GATTATGGATGTTATGTGGGAGATTTATCTATAAAGTTGGATGGCGGAACAGCTTGGCTTTACCAATTGTAAGCAATCTT CTTAAACCATGTTTTTTTTATAACTTTTCACATGTTCTTTCTGGAGAACTCTTCTTTGCTTATTTGTGATCAGTGTTCTC AAATTCCCACGGAAATGCTAACTTTCAAACATTAACTGATAACACAACAATCATTAACTTCTATATAAATTTAATGAAGA TATTATGTCATTAACTTTCTTCATGTTCATTTCAGGCTAGTAGATGCTTTTGGAGGGAATATTGCATCTTCAGTAGAAGA GGCTGTTTCGGAGAAAATCAAAGAAGGGATAGCAAAGCTTGACAAGTTTTTGCAGTCTCTTCCAAAGCAAATCCCACTAG ACAAAACTTCTGCACTAAATGTTTCTTTTGTCGGCAATCCTGTGTTGAGTAATTCCTCTATAGCTATTGCAATTAATGGT TTATTCACAGAGAGAAGTGAAGTTGTAGAATCTGAAGGTTATAAGAAAGGATTTAAGATTTCCTCTGCCTGTGGTGGTTT ACCAAAGATGATAAAGGTTTCACTACATGAATATGTGATTCAATCTGCTAGCCTGGTTTATTTCAATGTAAGTAACTTTA CTTCTTATACGCCTTAGTCCAATAACAGTCTTTTTACTTTTTAGTTTCATTATTCTGAGATCTATGTTGGATAGTAGCTT CTTAAAATCTGTTGCATAGGAGCCAAGCAAAAAAAAGTGACAGAATAGTGCTGATTCAGTTTTATTGACTAGTTGGATAG CTTCAACTAACTGTTCCACCTCAAGCATTTACGTCACATTATTATAGAATGCAGTGTAGTTTAATAGTTTGTTGTTTTTG TTCTTGTGTTCAGGCTGGTAAAATGCAATTGATTATCGATGAACTACCTGATCAGGACATTTTGAACACTGCTGAATGGA GATTCATAGTTCCTCAATTATACAAACAATATCCAAATGATAACATGCAGCTTGATATCTCTGTCTCTTCTCCACCAGTC ATACAAGTGACCTACCAAGATATTGGTGCTACTATTTCTATAGATATAACAATTGATGTTCTCAAAGGCGGTGAAGTCAT ACCTGTTGCATGCATCTCAGTGGTAAGCTTGATGAAGTCTAGAAATGGATAGTGATGTGCTTAAGTGGATAGTCAAAAAT TAAAAAAGCTAACAATCTTATAAGTAGCTATACCTCATAGTGTACTTTTCTTCAACATTCAGATTGAGATATAAGACATT CCAACTTATGACTCTTTTATCTTCATATTGTCATAGACAAAAACATAGCCATGGTTTGATTTCATTTATCAGTTAAGAGA GTAGCCATAAATGGTTTCTATATAACATGTTCCTTTGTCTTGCTTATATTACAGGATATTAGTGCTTCATGTGCTGCGGA AATTGTAGGAAACAATATTGCTGGTAGGCTCAGATTACAAAATTTGTCTACATACTTGAAATGGAGCAAAATTGGGAAAT TGCGCGTGCATCTTATTCAGGTAAATCAAAATAGACGTATTCCTATTTTCAGCTTGCAGTTATGTGTGTATCTTTTTCTT CAAAATTGGATGAAACTGAAATGTAAGTCCACATAATTTCCTCAAAGTTTGGGGAATACTCTAGGATAGTGATTCAATTC CTCAGTATTTCTATTTTAATTATTCACTGGTTTATCATAAAGCAATAGTGGTGTAAATCCTTAATTCATGTCAACATAAA TTTAGCATATGATTTATCTGTTAACCACGGGCACTTAATTATTGGTCCTAATATATAGTAAAGTGCTACCTATACAAGAT GTCGGGTTTATGTTTTTGTGCATTTCCATGACCATAATACCATTTCAAATTTTCAGTATTTTTTTCTGTTACAAAGCTCA ATCATTTGATTGAGAGAAAGAGAAGGAGGCAATAGACATACATTTATCCTGCTAGATGTAACGTCCATTGCAAGCAATCT GACCACACGGTTCCTCTTATCCTTCATGTTCCACTTTATGCATTCATTTATAATTCTGCTCATAGTTTAACACATGTGTA ACATCTTCCCACAAGTACACAAGGTTTTGATTTATGTTTAAAAATATATGGCTTGTTAAATAAACCTTAATCATTGTCTT CCCTCCAACCAGAATCTTACCTTTCAACTGTGTTAATATGTGCAGTCACTGATGTCAAGTGTCCTCAAAACAGTTATCAT ACCATACCTGAACTTCCAACTAAAGAGAGGAGTCATGTTGCCATATATTGATGGATTTGGGTTTCAGAATACTACTATCT TGTACACACCTCCATGGATTGCACTGTGTAGTGATGTTTCCTTCATAGGAGACTACTATCTTAATCAACAGTCACCTTTT GTATCATAAAACTACTCTGGAAAATTTGCTTGCTCTTTTTTTTTTGGGTAAGATGTATGTAAAGTTGAAGAATATACACA TGTAAATAGCGGTGTTTATCGGTTTGTTTCGAACCGGTGAAACCGATGATCCAAACCAAAACCAATTTACCTGGTGTTGT GATATCAAGTATAAGCAAGTCCTACGTTGGAAGAAAATAACAATTTTGAGCAACTTAAAAGTGAGAAAACTCATACACCC AGTACCTTTAGTTTTGAGTGAAATATATGGTGTCCAATACACTTGTGGTTTGCTCTTTAGTCCAATGTGGGGATCTTCTG TATTTTAAGAATCTCCATAGGCACAACAATTGGTACTAAAGCTTAGACTCTTTTGTGGTGATTTATCTAGTGGTGAACAA TGGAAATTAATCCAAGCCGAATGGTGACTTTGTATGACACTAACTATTCTCTTTGCATAGAAAGAATGGAAGACCTGTTT TTTTTATGAAAAACTTCTAGACAGACGAAGCCTAGACTCTCTTACATAGACTAGGGTGTTGATACATTCGTCAATGGGTC AATGATAATGTTATAAGGCACATTAGTGGGAAGATAAATGCTTGTACCTTGTGGAACCAGTTTGAGCAGTTGTATGCGAA GAAGACTGAGAACAATAAGTTGTTTTTTATCAAGCAGATGATGGCCTTGAAATATCAAGACGAGACTCCACTGGCATATC ATTTGAATAATTTCCAAGATATTTTGAATTAGTTGTCTGCCATGGGAATTAAATTTGATGAAGTTCATGGGTTATTGTTT CTTGGTTCCTTTCTAGATACGTGGAGAATATTAAGAACCTCATTGTCTAATTCTGCTCCAGATGGTGTGATGTTAATGAA CTTTGCCAAGATTAGTATTTTAAATGAAGAGATGAGAAGAAGATCGTAGAGTTCCTCTTCACATTCACGAGGGAGAAGGA AGAATTGTAGTTCAAACTACGGAGATCAAAGCATGCGCAGTTGCAGAAGTAAGTATAAAACTTTTCAGTGCAACCATTGT GGTAGGAAATGGTATCTTGAGAAGTACTGTTGGCTTTTCAAAAAGGAAAACAATGACAAAGGCAAATGGAAGAAGAAAAA AGAAGCTACATGTGAGAAGACAAAAATAATGTAACGTGATGATATTTGATGAACTCCTTCTTGTTGAGGAATATAATGCT GTAAATTTTGTTGGTAATGTACCCAGTTGGGTGATTGATACAGTGGCGGGACATAAGAGAGTCGTGGCACTTCCAAATTA TTTGAAAAATTGATAGGAGATCTAAGCTGCAACTTTGTAGATTTGTTAAGAGATGGGAAGGAGTTGAAGTTTGGAAGAGG ATATGAGTCAGGTGATGAGGAGATCGGTACCAAGGATCAAGAGAGTAGCAAGAATTTGTACGTCTTTTTTTTTTTTGTCT TTGTGGTATTTTTTATATATTTACGTAGGGGAATAATAAAGGTGGCATGAATAAATTACTTTTTGTTCATGAAAACTTCT AAGCATTTTCTCACTATTTTATATATTTACGCAGGGGTCTAACTGTGATCTCATTC
CDS sequence (LotjaGi6g1v0153400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACCCTCTATTTTCTTCGTTCTGCTATCCCTTCTGTTGATTCCAGCAAGTGGTTATGTCCAACTCTATGAAGATGG TTTCATCTCTGGGGTCATATCTGATAAGGGTCTCGATTTTGCGAAGGATTTGCTGATAGAGAAAGGTATTGCCTCTCTTG TTCTGCTTCAGCTGCCAGAGATTGAAAACTCTGCCAAAGTCCCACTTGTTGGAAATGCTAAAGTGGTTCTTTCTGATATC ACAATCAAGGATATTCAAATCAATTCTTCATCTGTTAAGACTGGAGAGAGTGGCATCGTTCTAGTCATTTCAGGTGCCAC TGCAGATTTGAGTATGAAGTGGAGGTATTCTTGCAGCAGTTGGTTGATCCCAATTGGGATTTCAGATAGTGGAACTGCTT CAGTGAAGGTTAAAGGCATGCAAGTAGGGCTTACAGTAAATTTAAAGAACCAAGAAGGAACTCTTAAGTTGAGTCTCTTA GATTATGGATGTTATGTGGGAGATTTATCTATAAAGTTGGATGGCGGAACAGCTTGGCTTTACCAATTGCTAGTAGATGC TTTTGGAGGGAATATTGCATCTTCAGTAGAAGAGGCTGTTTCGGAGAAAATCAAAGAAGGGATAGCAAAGCTTGACAAGT TTTTGCAGTCTCTTCCAAAGCAAATCCCACTAGACAAAACTTCTGCACTAAATGTTTCTTTTGTCGGCAATCCTGTGTTG AGTAATTCCTCTATAGCTATTGCAATTAATGGTTTATTCACAGAGAGAAGTGAAGTTGTAGAATCTGAAGGTTATAAGAA AGGATTTAAGATTTCCTCTGCCTGTGGTGGTTTACCAAAGATGATAAAGGTTTCACTACATGAATATGTGATTCAATCTG CTAGCCTGGTTTATTTCAATGCTGGTAAAATGCAATTGATTATCGATGAACTACCTGATCAGGACATTTTGAACACTGCT GAATGGAGATTCATAGTTCCTCAATTATACAAACAATATCCAAATGATAACATGCAGCTTGATATCTCTGTCTCTTCTCC ACCAGTCATACAAGTGACCTACCAAGATATTGGTGCTACTATTTCTATAGATATAACAATTGATGTTCTCAAAGGCGGTG AAGTCATACCTGTTGCATGCATCTCAGTGGATATTAGTGCTTCATGTGCTGCGGAAATTGTAGGAAACAATATTGCTGGT AGGCTCAGATTACAAAATTTGTCTACATACTTGAAATGGAGCAAAATTGGGAAATTGCGCGTGCATCTTATTCAGTCACT GATGTCAAGTGTCCTCAAAACAGTTATCATACCATACCTGAACTTCCAACTAAAGAGAGGAGTCATGTTGCCATATATTG ATGGATTTGGGTTTCAGAATACTACTATCTTGTACACACCTCCATGGATTGCACTGTGTAGTGATGTTTCCTTCATAGGA GACTACTATCTTAATCAACAGTCACCTTTTGTATCATAA
Protein sequence (LotjaGi6g1v0153400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAPSIFFVLLSLLLIPASGYVQLYEDGFISGVISDKGLDFAKDLLIEKGIASLVLLQLPEIENSAKVPLVGNAKVVLSDI TIKDIQINSSSVKTGESGIVLVISGATADLSMKWRYSCSSWLIPIGISDSGTASVKVKGMQVGLTVNLKNQEGTLKLSLL DYGCYVGDLSIKLDGGTAWLYQLLVDAFGGNIASSVEEAVSEKIKEGIAKLDKFLQSLPKQIPLDKTSALNVSFVGNPVL SNSSIAIAINGLFTERSEVVESEGYKKGFKISSACGGLPKMIKVSLHEYVIQSASLVYFNAGKMQLIIDELPDQDILNTA EWRFIVPQLYKQYPNDNMQLDISVSSPPVIQVTYQDIGATISIDITIDVLKGGEVIPVACISVDISASCAAEIVGNNIAG RLRLQNLSTYLKWSKIGKLRVHLIQSLMSSVLKTVIIPYLNFQLKRGVMLPYIDGFGFQNTTILYTPPWIALCSDVSFIG DYYLNQQSPFVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 492 | 492 | 9.8E-278 | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| SignalP_EUK | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 492 | 492 | 9.8E-278 | – | |
| PIRSF | 4 | 482 | 479 | 1.5E-127 | ||
| Phobius | 4 | 15 | 12 | - | – | |
| Phobius | 16 | 19 | 4 | - | – | |
| Phobius | 20 | 492 | 473 | - | – | |
| Gene3D | 32 | 463 | 432 | 8.8E-123 | – | |
| CDD | 33 | 254 | 222 | 4.85355E-38 | – | |
| SMART | 33 | 258 | 226 | 0.0043 | ||
| SUPERFAMILY | 33 | 242 | 210 | 7.32E-34 | ||
| Gene3D | 36 | 216 | 181 | 8.8E-123 | – | |
| Pfam | 37 | 209 | 173 | 1.3E-19 | ||
| SUPERFAMILY | 247 | 478 | 232 | 1.44E-39 | ||
| SMART | 276 | 474 | 199 | 3.6E-19 | ||
| Pfam | 280 | 464 | 185 | 4.6E-29 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. | ||
| Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi6g1v0153400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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